Guide to the Human Genome
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Name: HGS Sequence: fasta or formatted (777aa) NCBI GI: 4758528
Description:

hepatocyte growth factor-regulated tyrosine kinase substrate

Referenced in:

Non-Receptor Tyrosine Kinase Pathways
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         80           2
 C cysteine            1.3         10           1
 D aspartate           2.8         22           1
 E glutamate           8.4         65           4
 F phenylalanine       2.2         17           1
 G glycine             5.0         39           2
 H histidine           1.8         14           2
 I isoleucine          2.7         21           1
 K lysine              4.9         38           3
 L leucine             7.7         60           3
 M methionine          3.5         27           1
 N asparagine          3.1         24           1
 P proline             9.4         73           2
 Q glutamine          10.3         80           3
 R arginine            4.9         38           2
 S serine              8.5         66           2
 T threonine           4.2         33           2
 V valine              4.6         36           2
 W tryptophan          0.5          4           1
 Y tyrosine            3.9         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hepatocyte growth factor-regulated tyrosine kinase su... 
STAM2                 0.046   signal transducing adaptor molecule 2 
STAM                  0.043   signal transducing adaptor molecule 1 
TOM1L2                0.040   target of myb1-like 2 isoform 3 
TOM1                  0.040   target of myb1 isoform 2 
TOM1                  0.040   target of myb1 isoform 1 
ANKFY1                0.036   ankyrin repeat and FYVE domain containing 1 isoform...
ZFYVE28               0.033   zinc finger, FYVE domain containing 28 
TOM1                  0.033   target of myb1 isoform 3 
WDFY2                 0.033   WD repeat and FYVE domain containing 2 
WDFY1                 0.033   WD repeat and FYVE domain containing 1 
SMARCC2               0.031   SWI/SNF-related matrix-associated actin-dependent re...
ZFYVE16               0.031   zinc finger, FYVE domain containing 16 
ZFYVE16               0.031   zinc finger, FYVE domain containing 16 
GGA3                  0.030   ADP-ribosylation factor binding protein 3 isoform lo...
GGA1                  0.029   golgi associated, gamma adaptin ear containing, ARF b...
GGA1                  0.029   golgi associated, gamma adaptin ear containing, ARF ...
WDFY3                 0.027   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.027   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
ZFYVE1                0.026   zinc finger, FYVE domain containing 1 isoform 2 [Hom...
ZFYVE1                0.026   zinc finger, FYVE domain containing 1 isoform 1 [Hom...
RUFY1                 0.026   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.026   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.026   RUN and FYVE domain-containing 1 isoform a 
TOM1                  0.026   target of myb1 isoform 4 
RUFY2                 0.026   RUN and FYVE domain-containing 2 isoform a 
ENAH                  0.025   enabled homolog isoform a 
ENAH                  0.025   enabled homolog isoform b 
GGA2                  0.025   ADP-ribosylation factor binding protein 2 
ZFYVE26               0.024   zinc finger, FYVE domain containing 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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