Guide to the Human Genome
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Name: EVI5L Sequence: fasta or formatted (794aa) NCBI GI: 21687020
Description:

ecotropic viral integration site 5-like isoform 2

Referenced in:

Rab

Other entries for this name:
alt prot [805aa] ecotropic viral integration site 5-like isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         61           2
 C cysteine            1.1          9           1
 D aspartate           4.7         37           1
 E glutamate          12.0         95           3
 F phenylalanine       3.0         24           2
 G glycine             3.8         30           2
 H histidine           1.6         13           2
 I isoleucine          2.9         23           1
 K lysine              5.3         42           2
 L leucine            13.2        105           3
 M methionine          3.1         25           1
 N asparagine          2.8         22           2
 P proline             3.7         29           3
 Q glutamine           7.3         58           2
 R arginine            8.1         64           3
 S serine              8.6         68           4
 T threonine           3.0         24           2
 V valine              4.9         39           2
 W tryptophan          1.0          8           1
 Y tyrosine            2.3         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ecotropic viral integration site 5-like isoform 2 [H... 
EVI5L                 0.995   ecotropic viral integration site 5-like isoform 1 [...
EVI5                  0.469   ecotropic viral integration site 5 
RABGAP1               0.153   RAB GTPase activating protein 1 
RABGAP1L              0.144   RAB GTPase activating protein 1-like isoform A [Homo...
TBC1D4                0.108   TBC1 domain family, member 4 
TBC1D1                0.102   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
USP6NL                0.080   USP6 N-terminal like isoform 1 
USP6NL                0.080   USP6 N-terminal like isoform 2 
TBC1D10B              0.080   TBC1 domain family, member 10B 
TBC1D10C              0.076   TBC1 domain family, member 10C 
TBC1D10A              0.072   TBC1 domain family, member 10A 
TBC1D2B               0.065   TBC1 domain family, member 2B isoform a 
TBC1D8B               0.064   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D2B               0.061   TBC1 domain family, member 2B isoform b 
SGSM3                 0.060   small G protein signaling modulator 3 
TBC1D9B               0.059   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D9B               0.059   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D12               0.057   TBC1 domain family, member 12 
TBC1D8                0.057   TBC1 domain family, member 8 
TBC1D9                0.055   TBC1 domain family, member 9 (with GRAM domain) [Ho...
GRTP1                 0.053   growth hormone regulated TBC protein 1 
TBC1D14               0.051   TBC1 domain family, member 14 isoform b 
TBC1D14               0.051   TBC1 domain family, member 14 isoform a 
TBC1D14               0.051   TBC1 domain family, member 14 isoform a 
USP6                  0.045   ubiquitin specific protease 6 
TBC1D2                0.042   TBC1 domain family, member 2 
TBC1D3H               0.039   TBC1 domain family, member 3H 
TBC1D3G               0.039   TBC1 domain family, member 3G 
TBC1D3F               0.039   TBC1 domain family, member 3F 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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