NPHS2 35779

Name: NPHS2	Sequence: fasta or formatted (383aa)		NCBI GI: 7657615
Description: podocin		Referenced in: Additional Membrane Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 33 2 C cysteine 1.6 6 1 D aspartate 2.9 11 1 E glutamate 8.9 34 2 F phenylalanine 3.4 13 3 G glycine 6.8 26 3 H histidine 2.1 8 1 I isoleucine 5.0 19 2 K lysine 5.5 21 3 L leucine 11.7 45 3 M methionine 2.3 9 1 N asparagine 1.3 5 1 P proline 6.5 25 1 Q glutamine 3.1 12 1 R arginine 7.8 30 2 S serine 8.9 34 3 T threonine 4.7 18 2 V valine 6.8 26 2 W tryptophan 0.8 3 1 Y tyrosine 1.3 5 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 podocin STOM 0.346 stomatin isoform a STOML3 0.315 stomatin-like 3 isoform 2 STOML3 0.315 stomatin-like 3 isoform 1 STOML1 0.117 stomatin (EPB72)-like 1 STOML2 0.073 stomatin (EPB72)-like 2 STOM 0.054 stomatin isoform b FLOT1 0.030 flotillin 1 ERLIN2 0.019 ER lipid raft associated 2 isoform 1 FLJ37078 0.017 hypothetical protein LOC222183 ERLIN1 0.015 ER lipid raft associated 1 ERLIN1 0.015 ER lipid raft associated 1 LOC100292262 0.015 PREDICTED: hypothetical protein LOC100292370 0.014 PREDICTED: hypothetical protein LOC100128943 0.012 PREDICTED: similar to hCG2038853 LOC100292017 0.012 PREDICTED: hypothetical protein XP_002344620 LOC100128943 0.012 PREDICTED: similar to hCG2038853 LOC100128943 0.012 PREDICTED: similar to hCG2038853 COL18A1 0.012 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.012 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.012 alpha 1 type XVIII collagen isoform 1 precursor [Ho... BAHCC1 0.012 BAH domain and coiled-coil containing 1 FGF2 0.012 fibroblast growth factor 2 LOC100293809 0.011 PREDICTED: hypothetical protein LOC100128398 0.011 PREDICTED: hypothetical protein LOC100294366 0.011 PREDICTED: hypothetical protein LOC100128398 0.011 PREDICTED: hypothetical protein LOC100128398 0.011 PREDICTED: hypothetical protein INPP5J 0.011 phosphatidylinositol (4,5) bisphosphate 5-phosphatas... DDX51 0.011 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.