FLOT1 31441

Name: FLOT1	Sequence: fasta or formatted (427aa)		NCBI GI: 5031699
Description: flotillin 1		Referenced in: Additional Membrane Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.6 58 3 C cysteine 0.9 4 1 D aspartate 3.0 13 2 E glutamate 10.5 45 2 F phenylalanine 2.1 9 2 G glycine 4.9 21 2 H histidine 1.6 7 1 I isoleucine 5.6 24 1 K lysine 7.0 30 2 L leucine 7.5 32 2 M methionine 3.3 14 1 N asparagine 1.9 8 1 P proline 2.3 10 2 Q glutamine 8.4 36 2 R arginine 6.6 28 2 S serine 5.4 23 2 T threonine 4.4 19 1 V valine 8.4 36 2 W tryptophan 0.0 0 0 Y tyrosine 2.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 flotillin 1 FLOT2 0.452 flotillin 2 PLEC1 0.047 plectin 1 isoform 11 PLEC1 0.047 plectin 1 isoform 10 PLEC1 0.047 plectin 1 isoform 8 PLEC1 0.047 plectin 1 isoform 7 PLEC1 0.047 plectin 1 isoform 6 PLEC1 0.047 plectin 1 isoform 3 PLEC1 0.047 plectin 1 isoform 2 PLEC1 0.047 plectin 1 isoform 1 MYH2 0.045 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.045 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH1 0.040 myosin, heavy chain 1, skeletal muscle, adult [Homo... STOML2 0.038 stomatin (EPB72)-like 2 MYH4 0.037 myosin, heavy polypeptide 4, skeletal muscle MYH6 0.037 myosin heavy chain 6 CALD1 0.037 caldesmon 1 isoform 1 MYH13 0.036 myosin, heavy polypeptide 13, skeletal muscle [Homo... INCENP 0.036 inner centromere protein antigens 135/155kDa isofor... INCENP 0.036 inner centromere protein antigens 135/155kDa isofor... GIGYF2 0.036 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.036 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.036 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.036 GRB10 interacting GYF protein 2 isoform b MYH7 0.034 myosin, heavy chain 7, cardiac muscle, beta CCDC18 0.032 sarcoma antigen NY-SAR-41 STOM 0.032 stomatin isoform a CEP250 0.031 centrosomal protein 2 STOML3 0.029 stomatin-like 3 isoform 2 STOML3 0.029 stomatin-like 3 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.