STOM 26715

Name: STOM	Sequence: fasta or formatted (288aa)		NCBI GI: 38016911
Description: stomatin isoform a		Referenced in: Additional Membrane Functions
Other entries for this name: alt prot [123aa] stomatin isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 31 2 C cysteine 1.0 3 1 D aspartate 5.2 15 2 E glutamate 5.9 17 2 F phenylalanine 3.8 11 2 G glycine 5.2 15 2 H histidine 1.4 4 1 I isoleucine 9.7 28 2 K lysine 5.6 16 1 L leucine 9.4 27 2 M methionine 2.8 8 1 N asparagine 2.8 8 1 P proline 4.2 12 2 Q glutamine 4.2 12 1 R arginine 5.9 17 1 S serine 6.9 20 1 T threonine 6.9 20 2 V valine 5.9 17 2 W tryptophan 1.0 3 1 Y tyrosine 1.4 4 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 stomatin isoform a STOML3 0.661 stomatin-like 3 isoform 1 STOML3 0.659 stomatin-like 3 isoform 2 NPHS2 0.470 podocin STOM 0.202 stomatin isoform b STOML1 0.193 stomatin (EPB72)-like 1 STOML2 0.159 stomatin (EPB72)-like 2 FLOT1 0.047 flotillin 1 PHB 0.043 prohibitin PHB2 0.037 prohibitin 2 isoform 2 PHB2 0.037 prohibitin 2 isoform 1 FLOT2 0.036 flotillin 2 ERLIN1 0.019 ER lipid raft associated 1 ERLIN1 0.019 ER lipid raft associated 1 CDK5RAP2 0.017 CDK5 regulatory subunit associated protein 2 isoform... CDK5RAP2 0.017 CDK5 regulatory subunit associated protein 2 isoform... CCDC88B 0.013 coiled-coil domain containing 88 STT3B 0.013 source of immunodominant MHC-associated peptides [Ho... GOLGA3 0.013 Golgi autoantigen, golgin subfamily a, 3 KTN1 0.011 kinectin 1 isoform b KTN1 0.011 kinectin 1 isoform c PTX3 0.011 pentraxin 3 AMPH 0.007 amphiphysin isoform 2 AMPH 0.007 amphiphysin isoform 1 MVP 0.006 major vault protein MVP 0.006 major vault protein IL12RB2 0.006 interleukin 12 receptor, beta 2 precursor ARMC2 0.006 armadillo repeat containing 2 DARS 0.006 aspartyl-tRNA synthetase CD109 0.006 CD109 antigen isoform 3 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.