ERLIN2 33831

Name: ERLIN2	Sequence: fasta or formatted (339aa)		NCBI GI: 6005721
Description: ER lipid raft associated 2 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {152aa} ER lipid raft associated 2 isoform 2 alt prot {152aa} ER lipid raft associated 2 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.3 35 2 C cysteine 1.2 4 1 D aspartate 4.1 14 1 E glutamate 9.7 33 2 F phenylalanine 4.4 15 2 G glycine 4.7 16 2 H histidine 1.8 6 2 I isoleucine 6.5 22 1 K lysine 9.4 32 2 L leucine 8.8 30 2 M methionine 2.9 10 1 N asparagine 3.8 13 1 P proline 2.9 10 1 Q glutamine 4.4 15 2 R arginine 2.1 7 2 S serine 5.6 19 2 T threonine 5.6 19 2 V valine 7.4 25 2 W tryptophan 0.0 0 0 Y tyrosine 4.1 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ER lipid raft associated 2 isoform 1 ERLIN1 0.732 ER lipid raft associated 1 ERLIN1 0.732 ER lipid raft associated 1 ERLIN2 0.411 ER lipid raft associated 2 isoform 2 ERLIN2 0.411 ER lipid raft associated 2 isoform 2 SCAPER 0.025 S-phase cyclin A-associated protein in the ER isofo... SCAPER 0.025 S-phase cyclin A-associated protein in the ER isofo... NPHS2 0.022 podocin PLEC1 0.022 plectin 1 isoform 11 PLEC1 0.022 plectin 1 isoform 10 PLEC1 0.022 plectin 1 isoform 8 PLEC1 0.022 plectin 1 isoform 7 PLEC1 0.022 plectin 1 isoform 6 PLEC1 0.022 plectin 1 isoform 3 PLEC1 0.022 plectin 1 isoform 2 PLEC1 0.022 plectin 1 isoform 1 FLOT2 0.020 flotillin 2 LOC400352 0.019 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.019 PREDICTED: similar to Putative golgin subfamily A m... MSN 0.019 moesin MVP 0.019 major vault protein MVP 0.019 major vault protein MNS1 0.017 meiosis-specific nuclear structural 1 TRIM35 0.017 tripartite motif-containing 35 isoform 2 FLOT1 0.017 flotillin 1 TAF3 0.017 RNA polymerase II transcription factor TAFII140 [Ho... NCOR1 0.016 nuclear receptor co-repressor 1 GCOM1 0.016 GRINL1A combined protein isoform 2 GCOM1 0.016 GRINL1A combined protein isoform 1 GCOM1 0.016 GRINL1A combined protein isoform 8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.