Guide to the Human Genome
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Name: NBPF14 Sequence: fasta or formatted (921aa) NCBI GI: 7657017
Description:

hypothetical protein LOC25832

Referenced in:

Cyclic Nucleotides

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         28           1
 C cysteine            3.1         29           1
 D aspartate           7.6         70           3
 E glutamate          14.8        136           5
 F phenylalanine       2.1         19           2
 G glycine             4.9         45           1
 H histidine           1.6         15           1
 I isoleucine          2.1         19           2
 K lysine              5.2         48           2
 L leucine            10.7         99           2
 M methionine          1.2         11           1
 N asparagine          1.4         13           1
 P proline             6.6         61           2
 Q glutamine           6.7         62           2
 R arginine            6.6         61           3
 S serine              9.7         89           3
 T threonine           2.5         23           1
 V valine              5.6         52           2
 W tryptophan          0.3          3           1
 Y tyrosine            4.1         38           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC25832 
NBPF10                0.821   hypothetical protein LOC100132406 
LOC100288142          0.821   PREDICTED: hypothetical protein XP_002344485 
NBPF8                 0.821   PREDICTED: hypothetical protein LOC728841 
NBPF16                0.576   hypothetical protein LOC728936 
NBPF15                0.574   hypothetical protein LOC284565 
NBPF20                0.573   hypothetical protein LOC400818 
NBPF1                 0.571   hypothetical protein LOC55672 
NBPF11                0.464   hypothetical protein LOC728912 
LOC200030             0.464   neuroblastoma breakpoint family, member 11-like [Ho...
NBPF3                 0.368   neuroblastoma breakpoint family, member 3 
NBPF9                 0.209   PREDICTED: neuroblastoma breakpoint family, member ...
NBPF6                 0.203   neuroblastoma breakpoint family, member 6 isoform 1...
NBPF6                 0.201   neuroblastoma breakpoint family, member 6 isoform 2...
NBPF4                 0.201   neuroblastoma breakpoint family, member 4 
NBPF7                 0.168   hypothetical protein LOC343505 
NBPF8                 0.112   PREDICTED: hypothetical protein LOC728841, partial ...
PDE4DIP               0.029   phosphodiesterase 4D interacting protein isoform 1 ...
LOC100132057          0.022   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100132057          0.021   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100130000          0.021   PREDICTED: Neuroblastoma breakpoint family member 6...
LOC100130000          0.020   PREDICTED: Neuroblastoma breakpoint family member 6...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
LOC283685             0.016   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CEP250                0.016   centrosomal protein 2 
TCHH                  0.012   trichohyalin 
PRKCSH                0.012   protein kinase C substrate 80K-H isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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