Guide to the Human Genome
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Name: LOC100130000 Sequence: fasta or formatted (322aa) NCBI GI: 239741281
Description:

PREDICTED: Neuroblastoma breakpoint family member 6-like protein

Not currently referenced in the text

Other entries for this name:
alt prot {298aa} PREDICTED: Neuroblastoma breakpoint family member 6-like protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         23           2
 C cysteine            2.8          9           1
 D aspartate           3.7         12           1
 E glutamate           8.7         28           3
 F phenylalanine       4.0         13           1
 G glycine             3.4         11           2
 H histidine           3.1         10           1
 I isoleucine          4.0         13           2
 K lysine              6.2         20           2
 L leucine            11.8         38           2
 M methionine          0.9          3           1
 N asparagine          3.4         11           1
 P proline             4.0         13           3
 Q glutamine           7.5         24           1
 R arginine            8.1         26           2
 S serine              7.5         24           2
 T threonine           6.2         20           2
 V valine              3.7         12           1
 W tryptophan          0.9          3           1
 Y tyrosine            2.8          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: Neuroblastoma breakpoint family member 6... 
LOC100132057          0.917   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100132057          0.902   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100130000          0.901   PREDICTED: Neuroblastoma breakpoint family member 6...
NBPF6                 0.188   neuroblastoma breakpoint family, member 6 isoform 2...
NBPF6                 0.188   neuroblastoma breakpoint family, member 6 isoform 1...
NBPF4                 0.188   neuroblastoma breakpoint family, member 4 
PDE4DIP               0.168   phosphodiesterase 4D interacting protein isoform 1 ...
NBPF7                 0.160   hypothetical protein LOC343505 
NBPF15                0.146   hypothetical protein LOC284565 
NBPF16                0.146   hypothetical protein LOC728936 
NBPF20                0.146   hypothetical protein LOC400818 
NBPF1                 0.146   hypothetical protein LOC55672 
LOC100288142          0.144   PREDICTED: hypothetical protein XP_002344485 
NBPF8                 0.144   PREDICTED: hypothetical protein LOC728841 
NBPF9                 0.143   PREDICTED: neuroblastoma breakpoint family, member ...
NBPF10                0.141   hypothetical protein LOC100132406 
NBPF11                0.136   hypothetical protein LOC728912 
LOC200030             0.136   neuroblastoma breakpoint family, member 11-like [Ho...
NBPF3                 0.127   neuroblastoma breakpoint family, member 3 
NBPF14                0.062   hypothetical protein LOC25832 
CDK5RAP2              0.059   CDK5 regulatory subunit associated protein 2 isoform...
CDK5RAP2              0.059   CDK5 regulatory subunit associated protein 2 isoform...
LOC729130             0.058   PREDICTED: hypothetical protein 
LOC652164             0.050   PREDICTED: similar to phosphodiesterase 4D interact...
HSF2                  0.021   heat shock transcription factor 2 isoform b 
HSF2                  0.021   heat shock transcription factor 2 isoform a 
CENPF                 0.018   centromere protein F 
CCDC88C               0.018   DVL-binding protein DAPLE 
VIM                   0.018   vimentin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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