Guide to the Human Genome
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Name: NBPF10 Sequence: fasta or formatted (3628aa) NCBI GI: 224589132
Description:

hypothetical protein LOC100132406

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.7         99           1
 C cysteine            3.7        136           1
 D aspartate           8.1        295           3
 E glutamate          14.1        510           5
 F phenylalanine       1.7         60           2
 G glycine             5.4        197           1
 H histidine           1.0         36           1
 I isoleucine          1.6         58           2
 K lysine              5.9        215           2
 L leucine            11.4        415           2
 M methionine          0.7         26           1
 N asparagine          1.2         44           1
 P proline             7.1        256           2
 Q glutamine           6.6        238           2
 R arginine            7.4        268           3
 S serine              9.5        345           3
 T threonine           1.9         69           1
 V valine              5.3        194           2
 W tryptophan          0.1          4           1
 Y tyrosine            4.5        163           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC100132406 
LOC100288142          0.889   PREDICTED: hypothetical protein XP_002344485 
NBPF8                 0.810   PREDICTED: hypothetical protein LOC728841 
NBPF20                0.231   hypothetical protein LOC400818 
NBPF1                 0.228   hypothetical protein LOC55672 
NBPF14                0.206   hypothetical protein LOC25832 
LOC200030             0.178   neuroblastoma breakpoint family, member 11-like [Ho...
NBPF11                0.177   hypothetical protein LOC728912 
NBPF16                0.162   hypothetical protein LOC728936 
NBPF15                0.161   hypothetical protein LOC284565 
NBPF3                 0.109   neuroblastoma breakpoint family, member 3 
NBPF9                 0.067   PREDICTED: neuroblastoma breakpoint family, member ...
NBPF6                 0.061   neuroblastoma breakpoint family, member 6 isoform 1...
NBPF7                 0.060   hypothetical protein LOC343505 
NBPF6                 0.060   neuroblastoma breakpoint family, member 6 isoform 2...
NBPF4                 0.060   neuroblastoma breakpoint family, member 4 
NBPF8                 0.027   PREDICTED: hypothetical protein LOC728841, partial ...
LOC100132057          0.012   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100132057          0.012   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100130000          0.012   PREDICTED: Neuroblastoma breakpoint family member 6...
LOC100130000          0.012   PREDICTED: Neuroblastoma breakpoint family member 6...
PDE4DIP               0.008   phosphodiesterase 4D interacting protein isoform 1 ...
LOC283685             0.006   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYH9                  0.006   myosin, heavy polypeptide 9, non-muscle 
GOLIM4                0.005   golgi integral membrane protein 4 
NUMA1                 0.005   nuclear mitotic apparatus protein 1 
KIF4B                 0.005   kinesin family member 4B 
CEP250                0.005   centrosomal protein 2 
LOC283685             0.005   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CENPE                 0.005   centromere protein E 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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