Guide to the Human Genome
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Name: NBPF6 Sequence: fasta or formatted (667aa) NCBI GI: 221136844
Description:

neuroblastoma breakpoint family, member 6 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {638aa} neuroblastoma breakpoint family, member 6 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         41           2
 C cysteine            1.9         13           2
 D aspartate           6.7         45           2
 E glutamate          11.8         79           4
 F phenylalanine       1.9         13           1
 G glycine             3.4         23           1
 H histidine           3.6         24           2
 I isoleucine          2.7         18           2
 K lysine              5.4         36           2
 L leucine            10.8         72           2
 M methionine          0.9          6           1
 N asparagine          3.7         25           1
 P proline             6.6         44           2
 Q glutamine           6.7         45           2
 R arginine            5.5         37           3
 S serine              9.9         66           2
 T threonine           3.9         26           2
 V valine              5.5         37           2
 W tryptophan          0.9          6           1
 Y tyrosine            1.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuroblastoma breakpoint family, member 6 isoform 1... 
NBPF6                 0.945   neuroblastoma breakpoint family, member 6 isoform 2...
NBPF4                 0.939   neuroblastoma breakpoint family, member 4 
NBPF16                0.347   hypothetical protein LOC728936 
NBPF11                0.346   hypothetical protein LOC728912 
LOC200030             0.346   neuroblastoma breakpoint family, member 11-like [Ho...
NBPF15                0.344   hypothetical protein LOC284565 
LOC100288142          0.344   PREDICTED: hypothetical protein XP_002344485 
NBPF8                 0.344   PREDICTED: hypothetical protein LOC728841 
NBPF1                 0.342   hypothetical protein LOC55672 
NBPF20                0.341   hypothetical protein LOC400818 
NBPF10                0.338   hypothetical protein LOC100132406 
NBPF3                 0.335   neuroblastoma breakpoint family, member 3 
NBPF7                 0.303   hypothetical protein LOC343505 
NBPF14                0.284   hypothetical protein LOC25832 
NBPF9                 0.260   PREDICTED: neuroblastoma breakpoint family, member ...
LOC100132057          0.091   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100132057          0.089   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100130000          0.089   PREDICTED: Neuroblastoma breakpoint family member 6...
LOC100130000          0.086   PREDICTED: Neuroblastoma breakpoint family member 6...
PDE4DIP               0.055   phosphodiesterase 4D interacting protein isoform 1 ...
NBPF8                 0.042   PREDICTED: hypothetical protein LOC728841, partial ...
LOC727832             0.023   golgi autoantigen, golgin subfamily a-like 
MAP1B                 0.021   microtubule-associated protein 1B 
KIF4B                 0.020   kinesin family member 4B 
LOC440243             0.020   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283685             0.019   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ANP32E                0.019   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.019   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.019   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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