Guide to the Human Genome
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Name: LOC100132057 Sequence: fasta or formatted (298aa) NCBI GI: 239741304
Description:

PREDICTED: similar to Neuroblastoma breakpoint family member 6-like protein

Not currently referenced in the text

Other entries for this name:
alt prot {298aa} PREDICTED: similar to Neuroblastoma breakpoint family member 6-li...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         21           2
 C cysteine            2.3          7           1
 D aspartate           3.7         11           1
 E glutamate           8.7         26           3
 F phenylalanine       3.7         11           1
 G glycine             3.0          9           2
 H histidine           3.4         10           1
 I isoleucine          4.0         12           2
 K lysine              6.4         19           2
 L leucine            11.7         35           2
 M methionine          1.0          3           1
 N asparagine          3.7         11           1
 P proline             3.0          9           1
 Q glutamine           7.4         22           1
 R arginine            8.4         25           2
 S serine              8.1         24           2
 T threonine           6.4         19           2
 V valine              4.0         12           1
 W tryptophan          1.0          3           1
 Y tyrosine            3.0          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Neuroblastoma breakpoint fami... 
LOC100130000          1.000   PREDICTED: Neuroblastoma breakpoint family member 6...
LOC100132057          0.984   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100130000          0.983   PREDICTED: Neuroblastoma breakpoint family member 6...
NBPF6                 0.205   neuroblastoma breakpoint family, member 6 isoform 2...
NBPF6                 0.205   neuroblastoma breakpoint family, member 6 isoform 1...
NBPF4                 0.205   neuroblastoma breakpoint family, member 4 
PDE4DIP               0.184   phosphodiesterase 4D interacting protein isoform 1 ...
NBPF7                 0.175   hypothetical protein LOC343505 
NBPF15                0.159   hypothetical protein LOC284565 
NBPF16                0.159   hypothetical protein LOC728936 
NBPF20                0.159   hypothetical protein LOC400818 
NBPF1                 0.159   hypothetical protein LOC55672 
LOC100288142          0.157   PREDICTED: hypothetical protein XP_002344485 
NBPF8                 0.157   PREDICTED: hypothetical protein LOC728841 
NBPF9                 0.156   PREDICTED: neuroblastoma breakpoint family, member ...
NBPF10                0.154   hypothetical protein LOC100132406 
NBPF11                0.149   hypothetical protein LOC728912 
LOC200030             0.149   neuroblastoma breakpoint family, member 11-like [Ho...
NBPF3                 0.138   neuroblastoma breakpoint family, member 3 
NBPF14                0.068   hypothetical protein LOC25832 
CDK5RAP2              0.065   CDK5 regulatory subunit associated protein 2 isoform...
CDK5RAP2              0.065   CDK5 regulatory subunit associated protein 2 isoform...
LOC729130             0.063   PREDICTED: hypothetical protein 
LOC652164             0.054   PREDICTED: similar to phosphodiesterase 4D interact...
HSF2                  0.023   heat shock transcription factor 2 isoform b 
HSF2                  0.023   heat shock transcription factor 2 isoform a 
CENPF                 0.019   centromere protein F 
CCDC88C               0.019   DVL-binding protein DAPLE 
VIM                   0.019   vimentin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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