Guide to the Human Genome
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Name: NBPF9 Sequence: fasta or formatted (299aa) NCBI GI: 239741297
Description:

PREDICTED: neuroblastoma breakpoint family, member 9

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         18           2
 C cysteine            1.7          5           1
 D aspartate           5.7         17           3
 E glutamate          15.1         45           5
 F phenylalanine       1.7          5           1
 G glycine             4.7         14           2
 H histidine           2.3          7           1
 I isoleucine          2.7          8           2
 K lysine              9.0         27           2
 L leucine             9.4         28           2
 M methionine          1.3          4           1
 N asparagine          3.7         11           1
 P proline             4.3         13           1
 Q glutamine           8.7         26           2
 R arginine            5.0         15           1
 S serine              9.0         27           3
 T threonine           2.7          8           1
 V valine              5.4         16           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: neuroblastoma breakpoint family, member ... 
NBPF11                0.905   hypothetical protein LOC728912 
LOC200030             0.905   neuroblastoma breakpoint family, member 11-like [Ho...
NBPF15                0.891   hypothetical protein LOC284565 
NBPF16                0.891   hypothetical protein LOC728936 
LOC100288142          0.885   PREDICTED: hypothetical protein XP_002344485 
NBPF8                 0.885   PREDICTED: hypothetical protein LOC728841 
NBPF1                 0.884   hypothetical protein LOC55672 
NBPF20                0.882   hypothetical protein LOC400818 
NBPF10                0.875   hypothetical protein LOC100132406 
NBPF3                 0.746   neuroblastoma breakpoint family, member 3 
NBPF7                 0.704   hypothetical protein LOC343505 
NBPF14                0.679   hypothetical protein LOC25832 
NBPF6                 0.605   neuroblastoma breakpoint family, member 6 isoform 2...
NBPF6                 0.605   neuroblastoma breakpoint family, member 6 isoform 1...
NBPF4                 0.605   neuroblastoma breakpoint family, member 4 
LOC100132057          0.162   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100132057          0.157   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100130000          0.157   PREDICTED: Neuroblastoma breakpoint family member 6...
LOC100130000          0.153   PREDICTED: Neuroblastoma breakpoint family member 6...
PDE4DIP               0.101   phosphodiesterase 4D interacting protein isoform 1 ...
LOC440243             0.044   PREDICTED: Putative golgin subfamily A member 6-lik...
GOLIM4                0.044   golgi integral membrane protein 4 
TCHH                  0.044   trichohyalin 
CEP250                0.041   centrosomal protein 2 
LOC100133220          0.041   PREDICTED: hypothetical protein 
EIF5B                 0.041   eukaryotic translation initiation factor 5B 
GOLGA4                0.039   golgi autoantigen, golgin subfamily a, 4 
LOC283685             0.039   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC645202             0.037   PREDICTED: hypothetical protein LOC645202 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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