Guide to the Human Genome
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Name: NBPF4 Sequence: fasta or formatted (638aa) NCBI GI: 221218991
Description:

neuroblastoma breakpoint family, member 4

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         41           2
 C cysteine            2.0         13           2
 D aspartate           6.9         44           2
 E glutamate          11.9         76           4
 F phenylalanine       1.9         12           1
 G glycine             3.4         22           1
 H histidine           3.6         23           2
 I isoleucine          2.4         15           2
 K lysine              5.6         36           2
 L leucine            10.7         68           2
 M methionine          0.8          5           1
 N asparagine          3.4         22           1
 P proline             6.4         41           2
 Q glutamine           7.1         45           2
 R arginine            5.3         34           3
 S serine              9.9         63           2
 T threonine           4.1         26           2
 V valine              5.5         35           2
 W tryptophan          0.9          6           1
 Y tyrosine            1.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuroblastoma breakpoint family, member 4 
NBPF6                 0.993   neuroblastoma breakpoint family, member 6 isoform 2...
NBPF6                 0.981   neuroblastoma breakpoint family, member 6 isoform 1...
NBPF16                0.360   hypothetical protein LOC728936 
NBPF11                0.358   hypothetical protein LOC728912 
LOC200030             0.358   neuroblastoma breakpoint family, member 11-like [Ho...
NBPF15                0.358   hypothetical protein LOC284565 
LOC100288142          0.356   PREDICTED: hypothetical protein XP_002344485 
NBPF8                 0.356   PREDICTED: hypothetical protein LOC728841 
NBPF1                 0.354   hypothetical protein LOC55672 
NBPF20                0.353   hypothetical protein LOC400818 
NBPF10                0.351   hypothetical protein LOC100132406 
NBPF3                 0.344   neuroblastoma breakpoint family, member 3 
NBPF7                 0.310   hypothetical protein LOC343505 
NBPF14                0.293   hypothetical protein LOC25832 
NBPF9                 0.272   PREDICTED: neuroblastoma breakpoint family, member ...
LOC100132057          0.095   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100132057          0.093   PREDICTED: similar to Neuroblastoma breakpoint fami...
LOC100130000          0.093   PREDICTED: Neuroblastoma breakpoint family member 6...
LOC100130000          0.090   PREDICTED: Neuroblastoma breakpoint family member 6...
PDE4DIP               0.057   phosphodiesterase 4D interacting protein isoform 1 ...
NBPF8                 0.044   PREDICTED: hypothetical protein LOC728841, partial ...
LOC727832             0.027   golgi autoantigen, golgin subfamily a-like 
KIF4B                 0.021   kinesin family member 4B 
LOC440243             0.021   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283685             0.019   PREDICTED: golgi autoantigen, golgin subfamily a-li...
KIF4A                 0.019   kinesin family member 4 
NEXN                  0.019   nexilin (F actin binding protein) 
MYST4                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
LOC283767             0.018   golgi autoantigen, golgin subfamily a-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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