CASC5 35447

Name: CASC5	Sequence: fasta or formatted (2342aa)		NCBI GI: 74048514
Description: cancer susceptibility candidate 5 isoform 1		Referenced in: Centromere Proteins
Other entries for this name: alt prot [2316aa] cancer susceptibility candidate 5 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 96 3 C cysteine 2.2 52 1 D aspartate 6.4 150 2 E glutamate 8.7 204 4 F phenylalanine 3.3 78 2 G glycine 3.3 78 2 H histidine 2.6 61 2 I isoleucine 6.3 148 2 K lysine 8.1 190 2 L leucine 8.5 198 3 M methionine 2.4 56 2 N asparagine 7.1 166 3 P proline 4.3 101 2 Q glutamine 5.1 120 2 R arginine 3.4 79 3 S serine 9.3 217 3 T threonine 7.3 170 2 V valine 5.0 118 2 W tryptophan 0.6 13 1 Y tyrosine 2.0 47 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cancer susceptibility candidate 5 isoform 1 CASC5 0.985 cancer susceptibility candidate 5 isoform 2 GOLGA4 0.006 golgi autoantigen, golgin subfamily a, 4 MYH8 0.006 myosin, heavy chain 8, skeletal muscle, perinatal [... KTN1 0.006 kinectin 1 isoform b KTN1 0.006 kinectin 1 isoform c CCDC88A 0.006 coiled-coil domain containing 88A isoform 2 CCDC88A 0.006 coiled-coil domain containing 88A isoform 1 MYH4 0.006 myosin, heavy polypeptide 4, skeletal muscle MYH1 0.006 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH2 0.005 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.005 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH3 0.005 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYH9 0.005 myosin, heavy polypeptide 9, non-muscle CENPE 0.005 centromere protein E FAM184A 0.005 hypothetical protein LOC79632 isoform 1 SYCP1 0.005 synaptonemal complex protein 1 LOC283767 0.005 golgi autoantigen, golgin subfamily a-like NEXN 0.005 nexilin (F actin binding protein) CEP250 0.005 centrosomal protein 2 LOC400352 0.005 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.005 PREDICTED: similar to Putative golgin subfamily A m... KIF5C 0.005 kinesin family member 5C KIF20B 0.004 M-phase phosphoprotein 1 CEP110 0.004 centrosomal protein 110kDa TRIP11 0.004 thyroid hormone receptor interactor 11 CENPF 0.004 centromere protein F CCDC18 0.004 sarcoma antigen NY-SAR-41 C6orf204 0.004 chromosome 6 open reading frame 204 isoform a [Homo... LOC440243 0.004 PREDICTED: Putative golgin subfamily A member 6-lik... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.