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Search of human proteins with 71743840
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|71743840 class IV alcohol dehydrogenase, mu or sigma subunit
[Homo sapiens]
(386 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|71743840 class IV alcohol dehydrogenase, mu or sigma subunit ... 781 0.0
gi|34577061 class I alcohol dehydrogenase, beta subunit [Homo sa... 554 e-158
gi|4501933 class I alcohol dehydrogenase, gamma subunit [Homo sa... 552 e-157
gi|4501929 class I alcohol dehydrogenase, alpha subunit [Homo sa... 546 e-155
gi|156523966 class V alcohol dehydrogenase isoform 1 [Homo sapiens] 464 e-131
gi|71565154 class III alcohol dehydrogenase, chi subunit [Homo s... 463 e-130
gi|4501939 class V alcohol dehydrogenase isoform 2 [Homo sapiens] 458 e-129
gi|71565152 class II alcohol dehydrogenase, pi subunit [Homo sap... 442 e-124
gi|156627571 sorbitol dehydrogenase [Homo sapiens] 88 1e-17
gi|194239674 crystallin, zeta isoform a [Homo sapiens] 52 9e-07
gi|13236495 crystallin, zeta isoform a [Homo sapiens] 52 9e-07
gi|194239676 crystallin, zeta isoform b [Homo sapiens] 51 2e-06
gi|67078404 trans-2-enoyl-CoA reductase, mitochondrial isoform a... 49 1e-05
gi|28557745 zinc binding alcohol dehydrogenase domain containing... 41 0.002
gi|24308257 vesicle amine transport protein 1 homolog (T. califo... 39 0.010
gi|67078406 trans-2-enoyl-CoA reductase, mitochondrial isoform b... 37 0.039
gi|18379349 vesicle amine transport protein 1 [Homo sapiens] 35 0.15
gi|41872631 fatty acid synthase [Homo sapiens] 33 0.33
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 33 0.33
gi|90669511 crystallin, zeta-like 1 [Homo sapiens] 32 1.3
gi|56788377 nucleoporin like 1 isoform b [Homo sapiens] 30 2.8
gi|30102928 nucleoporin like 1 isoform a [Homo sapiens] 30 2.8
gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens] 30 3.7
gi|28558993 intraflagellar transport 88 homolog isoform 1 [Homo ... 30 3.7
gi|28329439 intraflagellar transport 88 homolog isoform 2 [Homo ... 30 3.7
gi|47519420 reticulon 4 interacting protein 1 precursor [Homo sa... 30 3.7
gi|21450785 suppressor of cytokine signaling 6 [Homo sapiens] 30 4.8
>gi|71743840 class IV alcohol dehydrogenase, mu or sigma subunit
[Homo sapiens]
Length = 386
Score = 781 bits (2017), Expect = 0.0
Identities = 386/386 (100%), Positives = 386/386 (100%)
Query: 1 MFAEIQIQDKDRMGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICR 60
MFAEIQIQDKDRMGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICR
Sbjct: 1 MFAEIQIQDKDRMGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICR 60
Query: 61 TDDHVIKGTMVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPD 120
TDDHVIKGTMVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPD
Sbjct: 61 TDDHVIKGTMVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPD 120
Query: 121 GNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEK 180
GNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEK
Sbjct: 121 GNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEK 180
Query: 181 VCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDK 240
VCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDK
Sbjct: 181 VCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDK 240
Query: 241 FEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGT 300
FEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGT
Sbjct: 241 FEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGT 300
Query: 301 SVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITH 360
SVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITH
Sbjct: 301 SVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITH 360
Query: 361 VLPFKKISEGFELLNSGQSIRTVLTF 386
VLPFKKISEGFELLNSGQSIRTVLTF
Sbjct: 361 VLPFKKISEGFELLNSGQSIRTVLTF 386
>gi|34577061 class I alcohol dehydrogenase, beta subunit [Homo
sapiens]
Length = 375
Score = 554 bits (1427), Expect = e-158
Identities = 259/375 (69%), Positives = 315/375 (84%), Gaps = 1/375 (0%)
Query: 13 MGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVS 72
M TAGKVIKCKAAVLWE K+PFSIE++EVAPPK EVRIK++A GIC TDDHV+ G +V+
Sbjct: 1 MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVT 60
Query: 73 KFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG- 131
PVI+GHEA GIVES+GEGVTTVKPGDKVIPLF PQC +C C+NP+ N C+++D+
Sbjct: 61 PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 120
Query: 132 RGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 191
RG L DGT RFTC+GKP+HHF+ TSTF++YTVVDE++VAKID A+P EKVCLIGCGFSTG
Sbjct: 121 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 180
Query: 192 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 251
YG+AV KV PGSTC VFGLGGVGLS +MGCK+AGA+RII +D+NKDKF KA +GATE
Sbjct: 181 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 240
Query: 252 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 311
CI+P+D KPI EVL EMT V ++FEVIG L+TM+ +L CH GTSV+VGVPP+++
Sbjct: 241 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 300
Query: 312 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGF 371
L+ +PMLL TGRTWKG V+GG KS++ +PKLV +F+AKKF LD LITHVLPF+KI+EGF
Sbjct: 301 NLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGF 360
Query: 372 ELLNSGQSIRTVLTF 386
+LL+SG+SIRTVLTF
Sbjct: 361 DLLHSGKSIRTVLTF 375
>gi|4501933 class I alcohol dehydrogenase, gamma subunit [Homo
sapiens]
Length = 375
Score = 552 bits (1422), Expect = e-157
Identities = 259/375 (69%), Positives = 314/375 (83%), Gaps = 1/375 (0%)
Query: 13 MGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVS 72
M TAGKVIKCKAAVLWE K+PFSIEE+EVAPPK EVRIK++A GICR+D+HV+ G +V+
Sbjct: 1 MSTAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVT 60
Query: 73 KFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG- 131
PVI+GHEA GIVES+GEGVTTVKPGDKVIPLF PQC +C C+NP+ N C+++D+
Sbjct: 61 PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNP 120
Query: 132 RGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 191
RG L DGT RFTC GKP+HHF+ STF++YTVVDE++VAKID A+P EKVCLIGCGFSTG
Sbjct: 121 RGTLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 180
Query: 192 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 251
YG+AVK KV PGSTC VFGLGGVGLSV+MGCK+AGA+RII +D+NKDKF KA +GATE
Sbjct: 181 YGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE 240
Query: 252 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 311
CI+P+D KPI EVL EMT V ++FEVIG L+TM+ +L CH GTSV+VGVPP ++
Sbjct: 241 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQ 300
Query: 312 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGF 371
L+ +PMLL TGRTWKG +FGG KS++ VPKLV +F+AKKF LD LIT++LPF+KI+EGF
Sbjct: 301 NLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNILPFEKINEGF 360
Query: 372 ELLNSGQSIRTVLTF 386
+LL SG+SIRTVLTF
Sbjct: 361 DLLRSGKSIRTVLTF 375
>gi|4501929 class I alcohol dehydrogenase, alpha subunit [Homo
sapiens]
Length = 375
Score = 546 bits (1407), Expect = e-155
Identities = 257/375 (68%), Positives = 313/375 (83%), Gaps = 1/375 (0%)
Query: 13 MGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVS 72
M TAGKVIKCKAAVLWE K+PFSIEE+EVAPPK EVRIK++A GIC TDDHV+ GTMV+
Sbjct: 1 MSTAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVT 60
Query: 73 KFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG- 131
PVI+GHEA GIVES+GEGVTTVKPGDKVIPL +PQC +C C+NP+ N C+++D++
Sbjct: 61 PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNP 120
Query: 132 RGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 191
+G L DGT+RFTC+ KP+HHF+ STF++YTVVDE++VAKID A+P EKVCLIGCGFSTG
Sbjct: 121 QGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 180
Query: 192 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 251
YG+AV KV PGSTC VFGLGGVGLS IMGCK+AGA+RII +D+NKDKF KA +GATE
Sbjct: 181 YGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATE 240
Query: 252 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 311
CI+P+D KPI EVL EMT V ++FEVIG L+TM+ +L CH GTSV+VGVPP ++
Sbjct: 241 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQ 300
Query: 312 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGF 371
L+ +PMLL TGRTWKG + GG KS++ VPKLV +F+AKKF LD LITHVLPF+KI+EGF
Sbjct: 301 NLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINEGF 360
Query: 372 ELLNSGQSIRTVLTF 386
+LL+SG+SIRT+L F
Sbjct: 361 DLLHSGKSIRTILMF 375
>gi|156523966 class V alcohol dehydrogenase isoform 1 [Homo sapiens]
Length = 375
Score = 464 bits (1193), Expect = e-131
Identities = 224/373 (60%), Positives = 285/373 (76%), Gaps = 1/373 (0%)
Query: 13 MGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVS 72
M T G+VI+CKAA+LW+ PFSIEE+EVAPPK KEVRIK++ATG+C T+ V+ +
Sbjct: 1 MSTTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLD 60
Query: 73 K-FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG 131
+P I+GHE GIVESIGEGV+TVKPGDKVI LFLPQC EC +C N +GN CI+ +
Sbjct: 61 LLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFCIQFKQSK 120
Query: 132 RGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 191
+++DGT+RFTCKGK ++HF NTSTF EYTV+ E SVAKID AP EKVCLI CGFSTG
Sbjct: 121 TQLMSDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFSTG 180
Query: 192 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 251
+GAA+ T KV PGSTC VFGLGGVGLSV+MGCK+AGA+RIIG+D+NK+KF+KA +GATE
Sbjct: 181 FGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGATE 240
Query: 252 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 311
C++P+D KPI EVL +MT + + FE IG+L+ + ALASC+ +YG VVVGV P++
Sbjct: 241 CLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGVLPASV 300
Query: 312 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGF 371
L L F+GR+ KG VFGG KSR +PKLV +++A+K +LD LITH L KI+E
Sbjct: 301 QLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAV 360
Query: 372 ELLNSGQSIRTVL 384
EL+ +G+ IR +L
Sbjct: 361 ELMKTGKCIRCIL 373
>gi|71565154 class III alcohol dehydrogenase, chi subunit [Homo
sapiens]
Length = 374
Score = 463 bits (1192), Expect = e-130
Identities = 227/371 (61%), Positives = 282/371 (76%), Gaps = 2/371 (0%)
Query: 16 AGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSK-F 74
A +VIKCKAAV WE +P SIEEIEVAPPK EVRIKI+AT +C TD + + G F
Sbjct: 2 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61
Query: 75 PVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDIT-GRG 133
PVI+GHE GIVES+GEGVT +K GD VIPL++PQC EC C NP NLC + +T G+G
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 134 VLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYG 193
++ DGT+RFTCKGK + H+M TSTF+EYTVV + SVAKID AP +KVCL+GCG STGYG
Sbjct: 122 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 181
Query: 194 AAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECI 253
AAV T K++PGS C VFGLGGVGL+VIMGCK AGASRIIG+D+NKDKF +A GATECI
Sbjct: 182 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 241
Query: 254 SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKML 313
+P+D +KPI EVL EMT V Y+FE IG+++ M AL +CH +G SVVVGV S + +
Sbjct: 242 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 301
Query: 314 TYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFEL 373
P L TGRTWKG FGG KS + VPKLV+E+++KK +D+ +TH L F +I++ FEL
Sbjct: 302 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFEL 361
Query: 374 LNSGQSIRTVL 384
++SG+SIRTV+
Sbjct: 362 MHSGKSIRTVV 372
>gi|4501939 class V alcohol dehydrogenase isoform 2 [Homo sapiens]
Length = 368
Score = 458 bits (1179), Expect = e-129
Identities = 221/367 (60%), Positives = 281/367 (76%), Gaps = 1/367 (0%)
Query: 13 MGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVS 72
M T G+VI+CKAA+LW+ PFSIEE+EVAPPK KEVRIK++ATG+C T+ V+ +
Sbjct: 1 MSTTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLD 60
Query: 73 K-FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG 131
+P I+GHE GIVESIGEGV+TVKPGDKVI LFLPQC EC +C N +GN CI+ +
Sbjct: 61 LLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFCIQFKQSK 120
Query: 132 RGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 191
+++DGT+RFTCKGK ++HF NTSTF EYTV+ E SVAKID AP EKVCLI CGFSTG
Sbjct: 121 TQLMSDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFSTG 180
Query: 192 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 251
+GAA+ T KV PGSTC VFGLGGVGLSV+MGCK+AGA+RIIG+D+NK+KF+KA +GATE
Sbjct: 181 FGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGATE 240
Query: 252 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 311
C++P+D KPI EVL +MT + + FE IG+L+ + ALASC+ +YG VVVGV P++
Sbjct: 241 CLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGVLPASV 300
Query: 312 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGF 371
L L F+GR+ KG VFGG KSR +PKLV +++A+K +LD LITH L KI+E
Sbjct: 301 QLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAV 360
Query: 372 ELLNSGQ 378
EL+ +G+
Sbjct: 361 ELMKTGK 367
>gi|71565152 class II alcohol dehydrogenase, pi subunit [Homo
sapiens]
Length = 380
Score = 442 bits (1138), Expect = e-124
Identities = 221/380 (58%), Positives = 273/380 (71%), Gaps = 6/380 (1%)
Query: 13 MGTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVS 72
MGT GKVIKCKAA+ WE +P IEE+EVAPPK EVRI+I+AT +C TD VI
Sbjct: 1 MGTKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEG 60
Query: 73 -KFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLC-----IR 126
FPVIVGHEA GIVESIG GVT VKPGDKVIPL+ P CR+C C +P NLC ++
Sbjct: 61 LAFPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLK 120
Query: 127 SDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGC 186
S + + ++ D T+RFTCKGKPV+HF TSTF++YTVV + ++AKIDD A E+VCL+GC
Sbjct: 121 SPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGC 180
Query: 187 GFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA 246
GFSTGYGAA+ KV PGSTC VFGLGGVGLS +MGCK+AGASRIIGID+N +KF KA A
Sbjct: 181 GFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKA 240
Query: 247 VGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGV 306
+GAT+C++P+D KPI EV+ E+T V + + G ETM AL +G+ +GV
Sbjct: 241 LGATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGV 300
Query: 307 PPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKK 366
+K LT P L GRT G FGG KS D +PKLVT++ KKF+LD L+TH LPF K
Sbjct: 301 AAGSKGLTIFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDK 360
Query: 367 ISEGFELLNSGQSIRTVLTF 386
ISE F+L+N G+S+RT+L F
Sbjct: 361 ISEAFDLMNQGKSVRTILIF 380
>gi|156627571 sorbitol dehydrogenase [Homo sapiens]
Length = 357
Score = 88.2 bits (217), Expect = 1e-17
Identities = 89/354 (25%), Positives = 151/354 (42%), Gaps = 32/354 (9%)
Query: 36 IEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESIGE 91
+E + P EV +++ + GIC +D H + G + K P+++GHEA+G VE +G
Sbjct: 22 LENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGS 81
Query: 92 GVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHH 151
V +KPGD+V E A R D + G + F C P
Sbjct: 82 SVKHLKPGDRV-------AIEPGAPREND-------EFCKMGRYNLSPSIFFCATPP--- 124
Query: 152 FMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG 211
+ + + + K+ D E+ LI S G A + G V G +V G
Sbjct: 125 --DDGNLCRFYKHNAAFCYKLPDNVTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCG 180
Query: 212 LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECIS-PKDSTKPISEVLSEMT 270
G +G+ ++ K+ GA++++ DL+ + KA +GA + K+S + I+ +
Sbjct: 181 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQL 240
Query: 271 GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCV 330
G T E G E I A + G V+VG+ +T P+L R + +
Sbjct: 241 GCKPEVTIECTG-AEASIQAGIYATRSGGNLVLVGL---GSEMTTVPLLHAAIR--EVDI 294
Query: 331 FGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQSIRTVL 384
G + + P ++ +K ++ L+TH P +K E FE G ++ +L
Sbjct: 295 KGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIML 348
>gi|194239674 crystallin, zeta isoform a [Homo sapiens]
Length = 329
Score = 52.0 bits (123), Expect = 9e-07
Identities = 57/271 (21%), Positives = 107/271 (39%), Gaps = 53/271 (19%)
Query: 38 EIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSK--FPVIVGHEATGIVESIGEGVTT 95
+I V PK +V IK+ A G+ + ++ GT K P G + G++E++G+ +
Sbjct: 27 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 86
Query: 96 VKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNT 155
K GD+V S I+G
Sbjct: 87 FKKGDRVF---------------------TSSTISG------------------------ 101
Query: 156 STFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GG 214
+ EY + + +V K+ + ++ IG + T Y A + + VK G + +V G GG
Sbjct: 102 -GYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGG 160
Query: 215 VGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNV 274
VGL+ ++ G +I+G ++ + + GA E + ++ I ++ + +
Sbjct: 161 VGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE-VNYIDKIKKYVGEKGI 218
Query: 275 GYTFEVIGHLETMIDALASCHMNYGTSVVVG 305
E++ ++ D H G +VVG
Sbjct: 219 DIIIEMLANVNLSKDLSLLSH--GGRVIVVG 247
>gi|13236495 crystallin, zeta isoform a [Homo sapiens]
Length = 329
Score = 52.0 bits (123), Expect = 9e-07
Identities = 57/271 (21%), Positives = 107/271 (39%), Gaps = 53/271 (19%)
Query: 38 EIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSK--FPVIVGHEATGIVESIGEGVTT 95
+I V PK +V IK+ A G+ + ++ GT K P G + G++E++G+ +
Sbjct: 27 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 86
Query: 96 VKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNT 155
K GD+V S I+G
Sbjct: 87 FKKGDRVF---------------------TSSTISG------------------------ 101
Query: 156 STFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GG 214
+ EY + + +V K+ + ++ IG + T Y A + + VK G + +V G GG
Sbjct: 102 -GYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGG 160
Query: 215 VGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNV 274
VGL+ ++ G +I+G ++ + + GA E + ++ I ++ + +
Sbjct: 161 VGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE-VNYIDKIKKYVGEKGI 218
Query: 275 GYTFEVIGHLETMIDALASCHMNYGTSVVVG 305
E++ ++ D H G +VVG
Sbjct: 219 DIIIEMLANVNLSKDLSLLSH--GGRVIVVG 247
>gi|194239676 crystallin, zeta isoform b [Homo sapiens]
Length = 295
Score = 51.2 bits (121), Expect = 2e-06
Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 50/223 (22%)
Query: 38 EIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSK--FPVIVGHEATGIVESIGEGVTT 95
+I V PK +V IK+ A G+ + ++ GT K P G + G++E++G+ +
Sbjct: 27 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 86
Query: 96 VKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNT 155
K GD+V S I+G
Sbjct: 87 FKKGDRVF---------------------TSSTISG------------------------ 101
Query: 156 STFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GG 214
+ EY + + +V K+ + ++ IG + T Y A + + VK G + +V G GG
Sbjct: 102 -GYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGG 160
Query: 215 VGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKD 257
VGL+ ++ G +I+G ++ + + GA E + ++
Sbjct: 161 VGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE 202
>gi|67078404 trans-2-enoyl-CoA reductase, mitochondrial isoform a
[Homo sapiens]
Length = 373
Score = 48.5 bits (114), Expect = 1e-05
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 36 IEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT--MVSKFPVIVGHEATGIVESIGEGV 93
++ +E+A + +VR+K+LA I +D ++I+G + + P + G+E V ++G V
Sbjct: 60 LKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNV 119
Query: 94 TTVKPGDKVIP 104
T +KPGD VIP
Sbjct: 120 TGLKPGDWVIP 130
>gi|28557745 zinc binding alcohol dehydrogenase domain containing 2
[Homo sapiens]
Length = 377
Score = 40.8 bits (94), Expect = 0.002
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 152 FMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG 211
+M +F EYTVV +S+A + PE + L+ G +T Y + + G + G +V
Sbjct: 123 YMAPGSFAEYTVV-PASIATPVPSVKPEYLTLLVSG-TTAYISLKELGGLSEGKKVLVTA 180
Query: 212 LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTG 271
G M +IG + +K ++G I+ K T+P+ VL +
Sbjct: 181 AAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYK--TEPVGTVLKQEYP 238
Query: 272 NNVGYTFEVIG--HLETMIDALASCHMNYGTSVVVG 305
V +E +G + +DALA+ G +V+G
Sbjct: 239 EGVDVVYESVGGAMFDLAVDALAT----KGRLIVIG 270
>gi|24308257 vesicle amine transport protein 1 homolog (T.
californica)-like [Homo sapiens]
Length = 419
Score = 38.5 bits (88), Expect = 0.010
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 44 PKTKEVRIKILATGICRTDDHVIKGTMVS--KFPVIVGHEATGIVESIGEGVTTVKPGDK 101
P+ E++I++ A G+ D V +G + + K P++ G E +GIVE++G+ V + GD+
Sbjct: 66 PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDR 125
Query: 102 VI 103
V+
Sbjct: 126 VM 127
>gi|67078406 trans-2-enoyl-CoA reductase, mitochondrial isoform b
[Homo sapiens]
Length = 297
Score = 36.6 bits (83), Expect = 0.039
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 53 ILATGICRTDDHVIKGT--MVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIP 104
+LA I +D ++I+G + + P + G+E V ++G VT +KPGD VIP
Sbjct: 1 MLAAPINPSDINMIQGNYGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIP 54
>gi|18379349 vesicle amine transport protein 1 [Homo sapiens]
Length = 393
Score = 34.7 bits (78), Expect = 0.15
Identities = 59/295 (20%), Positives = 100/295 (33%), Gaps = 75/295 (25%)
Query: 44 PKTKEVRIKILATGICRTDDHVIKGTM--VSKFPVIVGHEATGIVESIGEGVTTVKPGDK 101
P ++ +++ A G+ D +G + PV G E G+V ++GEGV+ K GD+
Sbjct: 74 PGPGQLTLRLRACGLNFADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDR 133
Query: 102 VIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEY 161
V+ L + + E
Sbjct: 134 VMVL-----------------------------------------------NRSGMWQEE 146
Query: 162 TVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPG-STCVVFGLGGVGLSVI 220
V I +A E+ + + T Y G ++PG S V GGVG++ +
Sbjct: 147 VTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGHSVLVHMAAGGVGMAAV 206
Query: 221 MGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEV 280
C++ + G + K E G T I +T + E+ +++ V +
Sbjct: 207 QLCRTVENVTVFG-TASASKHEALKENGVTHPID-YHTTDYVDEI-KKISPKGVDIVMDP 263
Query: 281 IGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTG---------RTW 326
+G +T Y + P K++TY L TG RTW
Sbjct: 264 LGGSDTA--------KGYNL-----LKPMGKVVTYGMANLLTGPKRNLMALARTW 305
>gi|41872631 fatty acid synthase [Homo sapiens]
Length = 2511
Score = 33.5 bits (75), Expect = 0.33
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 179 EKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVF-GLGGVGLSVI-----MGCK 224
E+ + +ST Y A V G+V+PG T ++ G GGVG + I +GC+
Sbjct: 1643 EEAASVPVVYSTAYYALVVRGRVRPGETLLIHSGSGGVGQAAIAIALSLGCR 1694
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 33.5 bits (75), Expect = 0.33
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 188 FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 247
+ST GA+ KT +P S+ V GLG +G +++ S +RI I ++ DK + A A
Sbjct: 281 WSTPSGASWKTASARPVSSVGVVGLGTMGRGIVI---SFARARIPVIAVDSDKNQLATAN 337
Query: 248 GATECISPKDSTK 260
+ K+++K
Sbjct: 338 KMITSVLEKEASK 350
>gi|90669511 crystallin, zeta-like 1 [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 1.3
Identities = 45/216 (20%), Positives = 85/216 (39%), Gaps = 28/216 (12%)
Query: 29 EQKQPFSIEEIEVAP-PKTKEVRIKILATGICRTDDHVIKGTMVSKFPVIVGHEATGIVE 87
+++ F +E E P + V++++ A + + + ++ + K VG E GIV
Sbjct: 12 DEEITFVFQEKEDLPVTEDNFVKLQVKACALSQINTKLLAEMKMKKDLFPVGREIAGIVL 71
Query: 88 SIGEGVTTVKPGDKVI---PLFLPQCRECNACRNPDGNLCIRSD----ITGRGVLADGTT 140
+G V+ +P D+V+ PL C R + L + + G + DG
Sbjct: 72 DVGSKVSFFQPDDEVVGILPLDSEDPGLCEVVRVHEHYLVHKPEKVTWTEAAGSIRDGVR 131
Query: 141 RFTCKGKPVHHFMNTSTFTEYTVVDESSV-------------AKIDDAA--PPEKVCLIG 185
+T +H+ + S ++D +S AK+ A +K CL
Sbjct: 132 AYTA----LHYLSHLSPGKSVLIMDGASAFGTIAIQLAHHRGAKVISTACSLEDKQCLER 187
Query: 186 CGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIM 221
V GKV +C+ GG+G+ +++
Sbjct: 188 FRPPIARVIDVSNGKVHVAESCLE-ETGGLGVDIVL 222
>gi|56788377 nucleoporin like 1 isoform b [Homo sapiens]
Length = 587
Score = 30.4 bits (67), Expect = 2.8
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 184 IGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGAS 229
+G F T +G+ + TG G LGG G S GC + GAS
Sbjct: 472 LGVSFGTPFGSGIGTGLQSSGLGSS--NLGGFGTSSGFGCSTTGAS 515
>gi|30102928 nucleoporin like 1 isoform a [Homo sapiens]
Length = 599
Score = 30.4 bits (67), Expect = 2.8
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 184 IGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGAS 229
+G F T +G+ + TG G LGG G S GC + GAS
Sbjct: 484 LGVSFGTPFGSGIGTGLQSSGLGSS--NLGGFGTSSGFGCSTTGAS 527
>gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens]
Length = 331
Score = 30.0 bits (66), Expect = 3.7
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
Query: 255 PKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMN----YGTSVVVGVPPSA 310
P + + E ++E +N+ F+V GH +AL +M Y SVV P
Sbjct: 150 PDEKIPTLREAVAECLNHNLTIFFDVKGHAHKATEALKKMYMEFPQLYNNSVVCSFLPEV 209
Query: 311 ----KMLTYDPMLLFTGRTWKGCVFGGLKSRDD 339
+ D + T R W G K R D
Sbjct: 210 IYKMRQTDRDVITALTHRPWSLSHTGDGKPRYD 242
>gi|28558993 intraflagellar transport 88 homolog isoform 1 [Homo
sapiens]
Length = 833
Score = 30.0 bits (66), Expect = 3.7
Identities = 27/115 (23%), Positives = 40/115 (34%), Gaps = 11/115 (9%)
Query: 192 YGAAVKTGKVKPGSTCVVFGLGGVGLSVI--MGCKSAGASRIIGIDLNKDKFEKAMAVGA 249
Y AV+ KV V LS + MG A AS I +N D++ A
Sbjct: 440 YNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAALTNK 499
Query: 250 TECISPKDSTKPISEVLSEMTGN---------NVGYTFEVIGHLETMIDALASCH 295
+ + +E E N N+G T+E + L+ +D H
Sbjct: 500 GNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLH 554
>gi|28329439 intraflagellar transport 88 homolog isoform 2 [Homo
sapiens]
Length = 824
Score = 30.0 bits (66), Expect = 3.7
Identities = 27/115 (23%), Positives = 40/115 (34%), Gaps = 11/115 (9%)
Query: 192 YGAAVKTGKVKPGSTCVVFGLGGVGLSVI--MGCKSAGASRIIGIDLNKDKFEKAMAVGA 249
Y AV+ KV V LS + MG A AS I +N D++ A
Sbjct: 431 YNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAALTNK 490
Query: 250 TECISPKDSTKPISEVLSEMTGN---------NVGYTFEVIGHLETMIDALASCH 295
+ + +E E N N+G T+E + L+ +D H
Sbjct: 491 GNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLH 545
>gi|47519420 reticulon 4 interacting protein 1 precursor [Homo
sapiens]
Length = 396
Score = 30.0 bits (66), Expect = 3.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 66 IKGTMVSKFPVIVGHEATGIVESIGEGVTTVKPGDKV 102
IKG +FP+ +G + +G+V G V KPGD+V
Sbjct: 110 IKG---EEFPLTLGRDVSGVVMECGLDVKYFKPGDEV 143
>gi|21450785 suppressor of cytokine signaling 6 [Homo sapiens]
Length = 535
Score = 29.6 bits (65), Expect = 4.8
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 231 IIGIDLNKDKFEKAMAVGATECI--SPK---DSTKPISEVLSEMTGNNVGYTFEVIGHLE 285
++ ++ D+ + +G T + SP+ D P+S +L M N + F + E
Sbjct: 274 VVAPEIFVDQSVNGLLIGTTGVMLQSPRAGHDDVPPLSPLLPPMQNNQIQRNFSGLTGTE 333
Query: 286 TMIDALASCHMNYGTSVVVGV 306
+ CH+N+ + GV
Sbjct: 334 AHVAESMRCHLNFDPNSAPGV 354
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,680,135
Number of Sequences: 37866
Number of extensions: 636104
Number of successful extensions: 1468
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1428
Number of HSP's gapped (non-prelim): 35
length of query: 386
length of database: 18,247,518
effective HSP length: 104
effective length of query: 282
effective length of database: 14,309,454
effective search space: 4035266028
effective search space used: 4035266028
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.