BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|71274186 hypothetical protein LOC85449 [Homo sapiens] (1200 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|71274186 hypothetical protein LOC85449 [Homo sapiens] 2413 0.0 gi|50843837 hypothetical protein LOC55701 [Homo sapiens] 260 6e-69 gi|193211598 pleckstrin homology domain containing, family G (wi... 187 7e-47 gi|193211596 pleckstrin homology domain containing, family G (wi... 187 7e-47 gi|193211594 pleckstrin homology domain containing, family G (wi... 187 7e-47 gi|55742734 pleckstrin homology domain containing, family G (wit... 187 7e-47 gi|193211603 pleckstrin homology domain containing, family G (wi... 182 1e-45 gi|148529025 pleckstrin homology domain containing, family G (wi... 179 1e-44 gi|163644325 MCF.2 cell line derived transforming sequence-like ... 84 6e-16 gi|163644323 MCF.2 cell line derived transforming sequence-like ... 84 6e-16 gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 70 2e-11 gi|148839466 kalirin, RhoGEF kinase isoform 1 [Homo sapiens] 69 3e-11 gi|4504335 kalirin, RhoGEF kinase isoform 2 [Homo sapiens] 69 3e-11 gi|188528641 SEC14 and spectrin domains 1 [Homo sapiens] 61 7e-09 gi|153791628 MCF.2 cell line derived transforming sequence isofo... 59 2e-08 gi|31742505 Rho family guanine-nucleotide exchange factor [Homo ... 56 2e-07 gi|91208420 bassoon protein [Homo sapiens] 54 1e-06 gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 52 3e-06 gi|18079216 CASK interacting protein 1 [Homo sapiens] 52 4e-06 gi|41281612 zinc finger protein 828 [Homo sapiens] 49 2e-05 gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 46 2e-04 gi|38787970 tensin like C1 domain containing phosphatase isoform... 46 2e-04 gi|38787957 tensin like C1 domain containing phosphatase isoform... 46 2e-04 gi|38787941 tensin like C1 domain containing phosphatase isoform... 46 2e-04 gi|153791325 MCF.2 cell line derived transforming sequence isofo... 46 2e-04 gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 5e-04 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 45 5e-04 gi|19924099 synapsin I isoform Ia [Homo sapiens] 44 7e-04 gi|19924097 synapsin I isoform Ib [Homo sapiens] 44 7e-04 gi|55741655 anoctamin 8 [Homo sapiens] 44 0.001 >gi|71274186 hypothetical protein LOC85449 [Homo sapiens] Length = 1200 Score = 2413 bits (6253), Expect = 0.0 Identities = 1200/1200 (100%), Positives = 1200/1200 (100%) Query: 1 MDPPSLDTAIQHALAGLYPPFEATAPTVLGQVFRLLDSGFQGDGLSFLLDFLIPAKRLCE 60 MDPPSLDTAIQHALAGLYPPFEATAPTVLGQVFRLLDSGFQGDGLSFLLDFLIPAKRLCE Sbjct: 1 MDPPSLDTAIQHALAGLYPPFEATAPTVLGQVFRLLDSGFQGDGLSFLLDFLIPAKRLCE 60 Query: 61 QVREAACAPYSHCLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVEPQEEQSVCIM 120 QVREAACAPYSHCLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVEPQEEQSVCIM Sbjct: 61 QVREAACAPYSHCLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVEPQEEQSVCIM 120 Query: 121 IKCLSLDLCTVDKKPVPEPAYPILFTQEWLEAINSDFEGNPLHNCLVASENGIAPVPWTK 180 IKCLSLDLCTVDKKPVPEPAYPILFTQEWLEAINSDFEGNPLHNCLVASENGIAPVPWTK Sbjct: 121 IKCLSLDLCTVDKKPVPEPAYPILFTQEWLEAINSDFEGNPLHNCLVASENGIAPVPWTK 180 Query: 181 ITSPEFVDDRPQVVNALCQAWGPLPLEALDLSSPQELHQASSPDNQVLPAQSLAKGKGRT 240 ITSPEFVDDRPQVVNALCQAWGPLPLEALDLSSPQELHQASSPDNQVLPAQSLAKGKGRT Sbjct: 181 ITSPEFVDDRPQVVNALCQAWGPLPLEALDLSSPQELHQASSPDNQVLPAQSLAKGKGRT 240 Query: 241 YGSKYPGLIKVEQARCGEVAFRMDEVVSQDFEGDYVALLGFSQESRGESPSREAGTSSGC 300 YGSKYPGLIKVEQARCGEVAFRMDEVVSQDFEGDYVALLGFSQESRGESPSREAGTSSGC Sbjct: 241 YGSKYPGLIKVEQARCGEVAFRMDEVVSQDFEGDYVALLGFSQESRGESPSREAGTSSGC 300 Query: 301 TSGALEEIAGTKETPLFQKILPLSEANEGPSLGNRACTKPESSEERPYNLGFRRKVNLKA 360 TSGALEEIAGTKETPLFQKILPLSEANEGPSLGNRACTKPESSEERPYNLGFRRKVNLKA Sbjct: 301 TSGALEEIAGTKETPLFQKILPLSEANEGPSLGNRACTKPESSEERPYNLGFRRKVNLKA 360 Query: 361 PTHNSERPPQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNPENMVQLRPGPRQA 420 PTHNSERPPQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNPENMVQLRPGPRQA Sbjct: 361 PTHNSERPPQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNPENMVQLRPGPRQA 420 Query: 421 SSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQR 480 SSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQR Sbjct: 421 SSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQR 480 Query: 481 QPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAA 540 QPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAA Sbjct: 481 QPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAA 540 Query: 541 LPEASAGSPERGPTLEEEPPGPEPRIGALGVKVFRSRIACLPGGRDRAGRPLLLVSTTEG 600 LPEASAGSPERGPTLEEEPPGPEPRIGALGVKVFRSRIACLPGGRDRAGRPLLLVSTTEG Sbjct: 541 LPEASAGSPERGPTLEEEPPGPEPRIGALGVKVFRSRIACLPGGRDRAGRPLLLVSTTEG 600 Query: 601 AWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAVLIDARRQPPQPGLVSALQATQAQVPA 660 AWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAVLIDARRQPPQPGLVSALQATQAQVPA Sbjct: 601 AWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAVLIDARRQPPQPGLVSALQATQAQVPA 660 Query: 661 SIRAILFLGEKEAALQLQTLPDVQVEVLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVH 720 SIRAILFLGEKEAALQLQTLPDVQVEVLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVH Sbjct: 661 SIRAILFLGEKEAALQLQTLPDVQVEVLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVH 720 Query: 721 FFQKLDPFLADLHQASSLLQASIEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLG 780 FFQKLDPFLADLHQASSLLQASIEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLG Sbjct: 721 FFQKLDPFLADLHQASSLLQASIEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLG 780 Query: 781 LQREGGATLARLQHDASRLDFSPDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELR 840 LQREGGATLARLQHDASRLDFSPDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELR Sbjct: 781 LQREGGATLARLQHDASRLDFSPDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELR 840 Query: 841 VRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSLETVEKAHAEFENFFLQAAAQYRRGL 900 VRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSLETVEKAHAEFENFFLQAAAQYRRGL Sbjct: 841 VRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSLETVEKAHAEFENFFLQAAAQYRRGL 900 Query: 901 ELSKQAAQLGATARGAGEAERAEFPELAAFASTQRAFQAELTHFYMAAERQRTDLETLLH 960 ELSKQAAQLGATARGAGEAERAEFPELAAFASTQRAFQAELTHFYMAAERQRTDLETLLH Sbjct: 901 ELSKQAAQLGATARGAGEAERAEFPELAAFASTQRAFQAELTHFYMAAERQRTDLETLLH 960 Query: 961 LHRFCKRMTWFHMDCQDLMAQLRLDKTSRVSPGDQRRLHRYLQRLASEFPAEKLAAVGLQ 1020 LHRFCKRMTWFHMDCQDLMAQLRLDKTSRVSPGDQRRLHRYLQRLASEFPAEKLAAVGLQ Sbjct: 961 LHRFCKRMTWFHMDCQDLMAQLRLDKTSRVSPGDQRRLHRYLQRLASEFPAEKLAAVGLQ 1020 Query: 1021 VASLSRAGLGQELWEEARIRHEEIRMLLEKALTHSSCPEAPAAHSARPERRGVAAKGQGV 1080 VASLSRAGLGQELWEEARIRHEEIRMLLEKALTHSSCPEAPAAHSARPERRGVAAKGQGV Sbjct: 1021 VASLSRAGLGQELWEEARIRHEEIRMLLEKALTHSSCPEAPAAHSARPERRGVAAKGQGV 1080 Query: 1081 SVEVTSKGRWDQPPLDSLGMDHLPKSYWPPGPPRGEQNRTFQAGSPPQEAGQAAEAEDGK 1140 SVEVTSKGRWDQPPLDSLGMDHLPKSYWPPGPPRGEQNRTFQAGSPPQEAGQAAEAEDGK Sbjct: 1081 SVEVTSKGRWDQPPLDSLGMDHLPKSYWPPGPPRGEQNRTFQAGSPPQEAGQAAEAEDGK 1140 Query: 1141 GSHKLPDPAREHLLATTFFRQQPPRQSQVPRLTGGSFSSEGTDSQTSLEDSPQTSPLASL 1200 GSHKLPDPAREHLLATTFFRQQPPRQSQVPRLTGGSFSSEGTDSQTSLEDSPQTSPLASL Sbjct: 1141 GSHKLPDPAREHLLATTFFRQQPPRQSQVPRLTGGSFSSEGTDSQTSLEDSPQTSPLASL 1200 >gi|50843837 hypothetical protein LOC55701 [Homo sapiens] Length = 1519 Score = 260 bits (664), Expect = 6e-69 Identities = 279/947 (29%), Positives = 400/947 (42%), Gaps = 140/947 (14%) Query: 1 MDPPSLDTAIQHALAGLYPPFEATAPTVLGQVFRLLDSGFQGDGLSFLLDFLIPAKRLCE 60 M+P ++ +Q LA LYPPFEATAPT+LGQVF++++ ++ D L + LDFL+PAK L Sbjct: 1 MEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTYREDALRYTLDFLVPAKHLLA 60 Query: 61 QVREAACAPYSHCLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVEPQEEQSVCIM 120 +V++ ACA YS LF HEGWPLCL ++VVV LA L LLR GDFYLQV P Q+ + Sbjct: 61 KVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLA 120 Query: 121 IKCLSLDLCTVDKKPVPEPAYPILFTQEWLEAINSDFEGNPLHNCLVASENGIAPVPWTK 180 +KCL+ V + PVP A LFT EWL+ IN D L CL+++ +GI +PW + Sbjct: 121 LKCLAPGGGRVQEVPVPNEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGIQRLPWAE 180 Query: 181 ITSPEFVDDRPQVVNALCQAWGP-LPLEALDLSSPQELHQASSPDNQVLPAQSLAKGKGR 239 + P FV +V P LP L SP LP ++L Sbjct: 181 LICPRFVHKEGLMVGHQPSTLPPELPSGPPGLPSPP------------LPEEAL------ 222 Query: 240 TYGSKYPGLIKVEQARCGEVAFRMDEVVSQDFEGDYVALLGFSQESRGESPSREAGTS-- 297 G++ PG + EG+YV LL + RG SP+ G+ Sbjct: 223 --GTRSPG--------------DGHNAPVEGPEGEYVELLEVTLPVRG-SPTDAEGSPGL 265 Query: 298 SGCTSGALEEIAGTKETPLFQKILPLSEANEGPSLGNRACTKPESSEERPYNLGFRRKVN 357 S + + AG K + + + GP + A RP G + Sbjct: 266 SRVRTVPTRKGAGGKGRHRRHRAW-MHQKGLGPRGQDGA---------RPPGEGSSTGAS 315 Query: 358 LKAPTHNSERPPQGSYMNVLE---DALDCASG--------LRAGVSQEPAASKMQGPLGN 406 ++P +E P+ + + V E +A+ ASG LR G A +GP G Sbjct: 316 PESPP-GAEAVPEAAVLEVSEPPAEAVGEASGSCPLRPGELRGGGGGGQGA---EGPPGT 371 Query: 407 PENMVQ-LRPGPRQASSPRLSPASPAAAASE-TKIEVKTKERNGRLPKPMPCPSRNTSSP 464 P + R R A LS +A S K + +E G LP P S Sbjct: 372 PRRTGKGNRRKKRAAGRGALSRGGDSAPLSPGDKEDASHQEALGNLPSP--------SEH 423 Query: 465 EPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLG--KAGTTQT 522 + P L G +P P K L + +P +++ G + G + Sbjct: 424 KLPECHLVKEEYEGSGKPESEP-----------KELKTAGEKEPQLSEACGPTEEGAGER 472 Query: 523 KTSGPA-------TAP-SPLTEEKAALPEASAGSPERGPTLEEEPPGPEPRIGALGVKV- 573 + GP T P PL++ P +G + EE AL V V Sbjct: 473 ELEGPGLLCMAGHTGPEGPLSD--TPTPPLETVQEGKGDNIPEE---------ALAVSVS 521 Query: 574 ---------FRSRIACLPGGRDRAGRPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPR 624 S L GG D++GR LL + T E P + + L YL ++ R Sbjct: 522 DHPDVAWDLMASGFLILTGGVDQSGRALLTI-TPPCPPEEPPPSRDTLNTTLHYLHSLLR 580 Query: 625 PEDKAKGLAVLIDARRQPP-QPGLVSAL-QATQAQVPASIRAILFLGEKEAALQLQTLPD 682 P+ + GL+VL+D R+ PP P L+ AL Q + P ++ +L L + +L Sbjct: 581 PDLQTLGLSVLLDLRQAPPLPPALIPALSQLQDSGDPPLVQRLLILIHDDLPTELCGFQG 640 Query: 683 VQVEVLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQAS 742 +V LK ++ P +L L G + WV Q++ ++ + Sbjct: 641 AEVLSENDLKRVA---KPEELQWELGGHRDPSPSHWVEIHQEVVRLCRLCQGVLGSVRQA 697 Query: 743 IEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGATLARLQHDASRLDFS 802 IEE E A P E + K L + VL DP L LQR+GGA L RL+ + Sbjct: 698 IEELEGAAEP----EEEEAVGMPKPL-QKVLADPRLTALQRDGGAILMRLRS-------T 745 Query: 803 PDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGR 862 P + LY VDE +H LV SN + + E R L RL+ QV W+ G Sbjct: 746 PSSKLEGQGPATLYQEVDEAIHQLVRLSNLHVQQQEQRQCLRRLQ----QVLQWLSGPGE 801 Query: 863 RCLQSLTPKDGSLETVEKAHAEFENFFLQA---AAQYRRGLELSKQA 906 L S +L +++ F F + AQ R L L + A Sbjct: 802 EQLASFAMPGDTLSALQETELRFRAFSAEVQERLAQAREALALEENA 848 >gi|193211598 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 isoform 1 [Homo sapiens] Length = 1191 Score = 187 bits (474), Expect = 7e-47 Identities = 167/538 (31%), Positives = 244/538 (45%), Gaps = 52/538 (9%) Query: 485 TPEKASLQHNGPW-----KVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATA-PSPLTEEK 538 T E +S+ GP +LC + S G GP+ A PS L+ Sbjct: 86 TVESSSVLSEGPGPSGVESLLCPMSSHLSLAQGESDTPGVGLVGDPGPSRAMPSGLSPGA 145 Query: 539 AALPEASAGSP--ERGPTLEEEPPG---PEPRIGALGV----KVFRSRIACLPGGRDRAG 589 G P E LE P G P+P L ++ S +A LPG RD G Sbjct: 146 LDSDPVGLGDPLSEISKLLEAAPSGSGLPKPADCLLAQDLCWELLASGMATLPGTRDVQG 205 Query: 590 RPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAVLIDARRQPPQPGLVS 649 R +LL+ AW C+ E+ +LL YL +IPRPE +A GL VL+DAR P L S Sbjct: 206 RAVLLLCAHSPAWLQSECSSQELIRLLLYLRSIPRPEVQALGLTVLVDARICAPSSSLFS 265 Query: 650 ALQATQAQVPASIRAILFLG-----EKEAALQLQTLPDVQVEVLTSLKALSHHVDPSQLP 704 L Q P ++ +L +G E + LQL+ LP ++L H+ + LP Sbjct: 266 GLSQLQEAAPGAVYQVLLVGSTLLKEVPSGLQLEQLPS---------QSLLTHIPTAGLP 316 Query: 705 AVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQASIEEFEKADPPGGMQEATRCLSK 764 L G PYCH W+ F ++L+ L + A +LLQ +IE + P E + L + Sbjct: 317 TSLGGGLPYCHQAWLDFRRRLEALLQNCQAACALLQGAIESVKAVPQPMEPGEVGQLLQQ 376 Query: 765 SKELMEAVLRDPGLLGLQREGGATLARLQHDASRLDFSPDVRSHLAAATALYSLVDEQLH 824 ++ LM+ VL P L LQ +GG L L+ + + SPD R+ + A LY VD LH Sbjct: 377 TEVLMQQVLDSPWLAWLQCQGGRELTWLKQEVPEVTLSPDYRTAMDKADELYDRVDGLLH 436 Query: 825 VLVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSLETVEKAHAE 884 L SN + LEL L E+ +HQ+ W++Q G L+ + SL+ + +A Sbjct: 437 QLTLQSNQRIQALELVQTLEARESGLHQIEVWLQQVGWPALEE--AGEPSLDMLLQAQGS 494 Query: 885 FENFFLQAAAQYRRGLELSKQAAQLGATARGAGEAERAEFPELAAFASTQRAFQAELTHF 944 F+ + A Q R+G + + T A E + P A F A +A+LT F Sbjct: 495 FQELYQVAQEQVRQGEKFLQP-----LTGWEAAELD----PPGARFL----ALRAQLTEF 541 Query: 945 YMA-AER--QRTDLETLLHLHRFCKRMTWFHMDCQDLMAQLRLDKTSRVSPGDQRRLH 999 A A+R + D E L L R + +TW + Q ++A+L ++ V Q +LH Sbjct: 542 SRALAQRCQRLADAERLFQLFR--EALTWAE-EGQRVLAELEQERPGVVL--QQLQLH 594 >gi|193211596 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 isoform 1 [Homo sapiens] Length = 1191 Score = 187 bits (474), Expect = 7e-47 Identities = 167/538 (31%), Positives = 244/538 (45%), Gaps = 52/538 (9%) Query: 485 TPEKASLQHNGPW-----KVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATA-PSPLTEEK 538 T E +S+ GP +LC + S G GP+ A PS L+ Sbjct: 86 TVESSSVLSEGPGPSGVESLLCPMSSHLSLAQGESDTPGVGLVGDPGPSRAMPSGLSPGA 145 Query: 539 AALPEASAGSP--ERGPTLEEEPPG---PEPRIGALGV----KVFRSRIACLPGGRDRAG 589 G P E LE P G P+P L ++ S +A LPG RD G Sbjct: 146 LDSDPVGLGDPLSEISKLLEAAPSGSGLPKPADCLLAQDLCWELLASGMATLPGTRDVQG 205 Query: 590 RPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAVLIDARRQPPQPGLVS 649 R +LL+ AW C+ E+ +LL YL +IPRPE +A GL VL+DAR P L S Sbjct: 206 RAVLLLCAHSPAWLQSECSSQELIRLLLYLRSIPRPEVQALGLTVLVDARICAPSSSLFS 265 Query: 650 ALQATQAQVPASIRAILFLG-----EKEAALQLQTLPDVQVEVLTSLKALSHHVDPSQLP 704 L Q P ++ +L +G E + LQL+ LP ++L H+ + LP Sbjct: 266 GLSQLQEAAPGAVYQVLLVGSTLLKEVPSGLQLEQLPS---------QSLLTHIPTAGLP 316 Query: 705 AVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQASIEEFEKADPPGGMQEATRCLSK 764 L G PYCH W+ F ++L+ L + A +LLQ +IE + P E + L + Sbjct: 317 TSLGGGLPYCHQAWLDFRRRLEALLQNCQAACALLQGAIESVKAVPQPMEPGEVGQLLQQ 376 Query: 765 SKELMEAVLRDPGLLGLQREGGATLARLQHDASRLDFSPDVRSHLAAATALYSLVDEQLH 824 ++ LM+ VL P L LQ +GG L L+ + + SPD R+ + A LY VD LH Sbjct: 377 TEVLMQQVLDSPWLAWLQCQGGRELTWLKQEVPEVTLSPDYRTAMDKADELYDRVDGLLH 436 Query: 825 VLVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSLETVEKAHAE 884 L SN + LEL L E+ +HQ+ W++Q G L+ + SL+ + +A Sbjct: 437 QLTLQSNQRIQALELVQTLEARESGLHQIEVWLQQVGWPALEE--AGEPSLDMLLQAQGS 494 Query: 885 FENFFLQAAAQYRRGLELSKQAAQLGATARGAGEAERAEFPELAAFASTQRAFQAELTHF 944 F+ + A Q R+G + + T A E + P A F A +A+LT F Sbjct: 495 FQELYQVAQEQVRQGEKFLQP-----LTGWEAAELD----PPGARFL----ALRAQLTEF 541 Query: 945 YMA-AER--QRTDLETLLHLHRFCKRMTWFHMDCQDLMAQLRLDKTSRVSPGDQRRLH 999 A A+R + D E L L R + +TW + Q ++A+L ++ V Q +LH Sbjct: 542 SRALAQRCQRLADAERLFQLFR--EALTWAE-EGQRVLAELEQERPGVVL--QQLQLH 594 >gi|193211594 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 isoform 1 [Homo sapiens] Length = 1191 Score = 187 bits (474), Expect = 7e-47 Identities = 167/538 (31%), Positives = 244/538 (45%), Gaps = 52/538 (9%) Query: 485 TPEKASLQHNGPW-----KVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATA-PSPLTEEK 538 T E +S+ GP +LC + S G GP+ A PS L+ Sbjct: 86 TVESSSVLSEGPGPSGVESLLCPMSSHLSLAQGESDTPGVGLVGDPGPSRAMPSGLSPGA 145 Query: 539 AALPEASAGSP--ERGPTLEEEPPG---PEPRIGALGV----KVFRSRIACLPGGRDRAG 589 G P E LE P G P+P L ++ S +A LPG RD G Sbjct: 146 LDSDPVGLGDPLSEISKLLEAAPSGSGLPKPADCLLAQDLCWELLASGMATLPGTRDVQG 205 Query: 590 RPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAVLIDARRQPPQPGLVS 649 R +LL+ AW C+ E+ +LL YL +IPRPE +A GL VL+DAR P L S Sbjct: 206 RAVLLLCAHSPAWLQSECSSQELIRLLLYLRSIPRPEVQALGLTVLVDARICAPSSSLFS 265 Query: 650 ALQATQAQVPASIRAILFLG-----EKEAALQLQTLPDVQVEVLTSLKALSHHVDPSQLP 704 L Q P ++ +L +G E + LQL+ LP ++L H+ + LP Sbjct: 266 GLSQLQEAAPGAVYQVLLVGSTLLKEVPSGLQLEQLPS---------QSLLTHIPTAGLP 316 Query: 705 AVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQASIEEFEKADPPGGMQEATRCLSK 764 L G PYCH W+ F ++L+ L + A +LLQ +IE + P E + L + Sbjct: 317 TSLGGGLPYCHQAWLDFRRRLEALLQNCQAACALLQGAIESVKAVPQPMEPGEVGQLLQQ 376 Query: 765 SKELMEAVLRDPGLLGLQREGGATLARLQHDASRLDFSPDVRSHLAAATALYSLVDEQLH 824 ++ LM+ VL P L LQ +GG L L+ + + SPD R+ + A LY VD LH Sbjct: 377 TEVLMQQVLDSPWLAWLQCQGGRELTWLKQEVPEVTLSPDYRTAMDKADELYDRVDGLLH 436 Query: 825 VLVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSLETVEKAHAE 884 L SN + LEL L E+ +HQ+ W++Q G L+ + SL+ + +A Sbjct: 437 QLTLQSNQRIQALELVQTLEARESGLHQIEVWLQQVGWPALEE--AGEPSLDMLLQAQGS 494 Query: 885 FENFFLQAAAQYRRGLELSKQAAQLGATARGAGEAERAEFPELAAFASTQRAFQAELTHF 944 F+ + A Q R+G + + T A E + P A F A +A+LT F Sbjct: 495 FQELYQVAQEQVRQGEKFLQP-----LTGWEAAELD----PPGARFL----ALRAQLTEF 541 Query: 945 YMA-AER--QRTDLETLLHLHRFCKRMTWFHMDCQDLMAQLRLDKTSRVSPGDQRRLH 999 A A+R + D E L L R + +TW + Q ++A+L ++ V Q +LH Sbjct: 542 SRALAQRCQRLADAERLFQLFR--EALTWAE-EGQRVLAELEQERPGVVL--QQLQLH 594 >gi|55742734 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 isoform 1 [Homo sapiens] Length = 1191 Score = 187 bits (474), Expect = 7e-47 Identities = 167/538 (31%), Positives = 244/538 (45%), Gaps = 52/538 (9%) Query: 485 TPEKASLQHNGPW-----KVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATA-PSPLTEEK 538 T E +S+ GP +LC + S G GP+ A PS L+ Sbjct: 86 TVESSSVLSEGPGPSGVESLLCPMSSHLSLAQGESDTPGVGLVGDPGPSRAMPSGLSPGA 145 Query: 539 AALPEASAGSP--ERGPTLEEEPPG---PEPRIGALGV----KVFRSRIACLPGGRDRAG 589 G P E LE P G P+P L ++ S +A LPG RD G Sbjct: 146 LDSDPVGLGDPLSEISKLLEAAPSGSGLPKPADCLLAQDLCWELLASGMATLPGTRDVQG 205 Query: 590 RPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAVLIDARRQPPQPGLVS 649 R +LL+ AW C+ E+ +LL YL +IPRPE +A GL VL+DAR P L S Sbjct: 206 RAVLLLCAHSPAWLQSECSSQELIRLLLYLRSIPRPEVQALGLTVLVDARICAPSSSLFS 265 Query: 650 ALQATQAQVPASIRAILFLG-----EKEAALQLQTLPDVQVEVLTSLKALSHHVDPSQLP 704 L Q P ++ +L +G E + LQL+ LP ++L H+ + LP Sbjct: 266 GLSQLQEAAPGAVYQVLLVGSTLLKEVPSGLQLEQLPS---------QSLLTHIPTAGLP 316 Query: 705 AVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQASIEEFEKADPPGGMQEATRCLSK 764 L G PYCH W+ F ++L+ L + A +LLQ +IE + P E + L + Sbjct: 317 TSLGGGLPYCHQAWLDFRRRLEALLQNCQAACALLQGAIESVKAVPQPMEPGEVGQLLQQ 376 Query: 765 SKELMEAVLRDPGLLGLQREGGATLARLQHDASRLDFSPDVRSHLAAATALYSLVDEQLH 824 ++ LM+ VL P L LQ +GG L L+ + + SPD R+ + A LY VD LH Sbjct: 377 TEVLMQQVLDSPWLAWLQCQGGRELTWLKQEVPEVTLSPDYRTAMDKADELYDRVDGLLH 436 Query: 825 VLVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSLETVEKAHAE 884 L SN + LEL L E+ +HQ+ W++Q G L+ + SL+ + +A Sbjct: 437 QLTLQSNQRIQALELVQTLEARESGLHQIEVWLQQVGWPALEE--AGEPSLDMLLQAQGS 494 Query: 885 FENFFLQAAAQYRRGLELSKQAAQLGATARGAGEAERAEFPELAAFASTQRAFQAELTHF 944 F+ + A Q R+G + + T A E + P A F A +A+LT F Sbjct: 495 FQELYQVAQEQVRQGEKFLQP-----LTGWEAAELD----PPGARFL----ALRAQLTEF 541 Query: 945 YMA-AER--QRTDLETLLHLHRFCKRMTWFHMDCQDLMAQLRLDKTSRVSPGDQRRLH 999 A A+R + D E L L R + +TW + Q ++A+L ++ V Q +LH Sbjct: 542 SRALAQRCQRLADAERLFQLFR--EALTWAE-EGQRVLAELEQERPGVVL--QQLQLH 594 >gi|193211603 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 isoform 2 [Homo sapiens] Length = 1110 Score = 182 bits (463), Expect = 1e-45 Identities = 157/507 (30%), Positives = 234/507 (46%), Gaps = 55/507 (10%) Query: 517 AGTTQTKTSGPATAPSPLTEE----------KAALPEAS--AGSPERGP----TLEEEPP 560 A K GP P+ T++ K LP A+ +G +RG ++ E P Sbjct: 38 ASQMHVKDPGPPRPPAGATQDEELQGSPLSRKFQLPPAADESGDAQRGTVESSSVLSEGP 97 Query: 561 GPEPRIGALGVKVFRSRIACLPGGRDRAGRPLLLVSTTEGAWEAPWCTVSEVTKLLSYLC 620 GP L S ++ G RD GR +LL+ AW C+ E+ +LL YL Sbjct: 98 GPSGVESLLCP--MSSHLSLAQGTRDVQGRAVLLLCAHSPAWLQSECSSQELIRLLLYLR 155 Query: 621 TIPRPEDKAKGLAVLIDARRQPPQPGLVSALQATQAQVPASIRAILFLG-----EKEAAL 675 +IPRPE +A GL VL+DAR P L S L Q P ++ +L +G E + L Sbjct: 156 SIPRPEVQALGLTVLVDARICAPSSSLFSGLSQLQEAAPGAVYQVLLVGSTLLKEVPSGL 215 Query: 676 QLQTLPDVQVEVLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQA 735 QL+ LP ++L H+ + LP L G PYCH W+ F ++L+ L + A Sbjct: 216 QLEQLPS---------QSLLTHIPTAGLPTSLGGGLPYCHQAWLDFRRRLEALLQNCQAA 266 Query: 736 SSLLQASIEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGATLARLQHD 795 +LLQ +IE + P E + L +++ LM+ VL P L LQ +GG L L+ + Sbjct: 267 CALLQGAIESVKAVPQPMEPGEVGQLLQQTEVLMQQVLDSPWLAWLQCQGGRELTWLKQE 326 Query: 796 ASRLDFSPDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELRVRLGRLEAAIHQVSD 855 + SPD R+ + A LY VD LH L SN + LEL L E+ +HQ+ Sbjct: 327 VPEVTLSPDYRTAMDKADELYDRVDGLLHQLTLQSNQRIQALELVQTLEARESGLHQIEV 386 Query: 856 WMEQEGRRCLQSLTPKDGSLETVEKAHAEFENFFLQAAAQYRRGLELSKQAAQLGATARG 915 W++Q G L+ + SL+ + +A F+ + A Q R+G + + T Sbjct: 387 WLQQVGWPALEE--AGEPSLDMLLQAQGSFQELYQVAQEQVRQGEKFLQP-----LTGWE 439 Query: 916 AGEAERAEFPELAAFASTQRAFQAELTHFYMA-AER--QRTDLETLLHLHRFCKRMTWFH 972 A E + P A F A +A+LT F A A+R + D E L L R + +TW Sbjct: 440 AAELD----PPGARFL----ALRAQLTEFSRALAQRCQRLADAERLFQLFR--EALTWAE 489 Query: 973 MDCQDLMAQLRLDKTSRVSPGDQRRLH 999 + Q ++A+L ++ V Q +LH Sbjct: 490 -EGQRVLAELEQERPGVVL--QQLQLH 513 >gi|148529025 pleckstrin homology domain containing, family G (with RhoGef domain) member 4B [Homo sapiens] Length = 1271 Score = 179 bits (454), Expect = 1e-44 Identities = 114/306 (37%), Positives = 163/306 (53%), Gaps = 12/306 (3%) Query: 542 PEASAGSPERGPTLEEE--PPGP-------EPRIGALGVKVFRSRIACLPGGRDRAGRPL 592 P + P R P E+E PPG ++ + ++ +S + LPG RDR GR + Sbjct: 157 PSGPSDVPARQPHPEQEGWPPGTGDFPSQVPKQVLDVSQELLQSGVVTLPGTRDRHGRAV 216 Query: 593 LLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAVLIDARRQPPQPGLVSALQ 652 + V T W + +E+T+LL Y +IPR E + GL VL+DARR P P + AL Sbjct: 217 VQVRTRSLLWTREHSSCAELTRLLLYFHSIPRKEVRDLGLVVLVDARRSPAAPAVSQALS 276 Query: 653 ATQAQVPASIRAILFLGEKEAALQLQTLPDVQVEVLTSLKALSHHVDPSQLPAVLEGPFP 712 Q I +IL L +KE+A + +Q EV++SLKA+ VD QL A L+G FP Sbjct: 277 GLQNNTSPIIHSILLLVDKESAFRPDKDAIIQCEVVSSLKAVHKFVDSCQLTADLDGSFP 336 Query: 713 YCHTEWVHFFQKLDPFLADLHQASSLLQASIEEFEKADPPGGMQEATRCLSKSKELMEAV 772 Y H +W+ F Q+L+ F A+ +A LQ S P QE + + + +M+ V Sbjct: 337 YSHGDWICFRQRLEHFAANCEEAIIFLQNSFCSLNTHRTPRTAQEVAELIDQHETMMKLV 396 Query: 773 LRDPGLLGLQREGGATLARLQHDASRLDFSPDVRSHLAAATALYSLVDEQLHVLVTASNS 832 L DP L+ L+ EGG LARL+ + + D R L AAT+LY VDE++H LV SN+ Sbjct: 397 LEDPLLVSLRLEGGTVLARLRREELGTE---DSRDTLEAATSLYDRVDEEVHRLVLTSNN 453 Query: 833 LLGKLE 838 L +LE Sbjct: 454 RLQQLE 459 >gi|163644325 MCF.2 cell line derived transforming sequence-like isoform a [Homo sapiens] Length = 1182 Score = 84.3 bits (207), Expect = 6e-16 Identities = 137/595 (23%), Positives = 234/595 (39%), Gaps = 78/595 (13%) Query: 575 RSRIACLPGGRDRAGRPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAV 634 + R A L GGR + G P++ E P E +++YL +IP +D G + Sbjct: 104 KKRFAYLSGGRGQDGSPVITFPDYPAFSEIP---DKEFQNVMTYLTSIPSLQDAGIGFIL 160 Query: 635 LIDARRQPPQPGLVSALQATQAQVPASIRAILFLGEKEAALQLQTLPD------------ 682 +ID RR S L+ A PA+++ +L L + +TL D Sbjct: 161 VIDRRRDKWTSVKASVLRIA-ASFPANLQLVLVL--RPTGFFQRTLSDIAFKFNRDDFKM 217 Query: 683 -VQVEVLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQA 741 V V +L+S+ L ++D SQL L G YCH+ W+ ++ F + Q + +LQ+ Sbjct: 218 KVPVIMLSSVPDLHGYIDKSQLTEDLGGTLDYCHSRWLCQRTAIESFALMVKQTAQMLQS 277 Query: 742 SIEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGA---TLARLQHDASR 798 E + + P +Q + L E + D L +EG + +L LQ + S Sbjct: 278 FGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDLRL--ALKEGHSVLESLRELQAEGSE 335 Query: 799 LDFSPDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELRVRLGRLEAAIHQVSDWME 858 + D + A L + ++E KLE ++L E +V ++ Sbjct: 336 PSVNQDQLDNQATVQRLLAQLNETEAAFDEFWAKHQQKLEQCLQLRHFEQGFREVKAILD 395 Query: 859 QEGRRCLQSLTPKDGSLETVEKAHAEFENFFLQAAAQYRRGLELSKQAAQLGATARGAGE 918 ++ + + T SL VE + +F ++ R LS QL A + Sbjct: 396 AASQK-IATFTDIGNSLAHVEHLLRDLASFEEKSGVAVERARALSLDGEQLIGNKHYAVD 454 Query: 919 AERAEFPELAAFASTQRAFQAELTHFYMAAERQRTDLETLLHLHRFCK-RMTWFHMDCQD 977 + R + EL F AE+ R+R L L LHR + M W C + Sbjct: 455 SIRPKCQELRHLCD---QFSAEIA-------RRRGLLSKSLELHRRLETSMKW----CDE 500 Query: 978 ---LMAQLRLDKTSRVSPGDQ--RRLHRYLQRLASEFPAEKLAAVGLQVASLSRAGLGQE 1032 L+A +DK + + + ++L+ +E ++L A+ + S+ L Q+ Sbjct: 501 GIYLLASQPVDKCQSQDGAEAALQEIEKFLE-TGAENKIQELNAIYKEYESI----LNQD 555 Query: 1033 LWEEARIRHEEIRMLLEKALTHSSCPEAPAAHSARPERRGVAAKGQGVSVEVTSKGRWDQ 1092 L E R ++ + E + + AA RP Q V+ Sbjct: 556 LMEHVRKVFQKQASMEEVFHRRQASLKKLAARQTRPV--------QPVA----------- 596 Query: 1093 PPLDSLGMDHLPKSYWPPGPPRGEQNRTFQAGS----PPQEA-GQAAEAEDGKGS 1142 P ++L P PG RG +N + + G+ P + A + +E+ G+GS Sbjct: 597 PRPEALAKSPCPS----PGIRRGSENSSSEGGALRRGPYRRAKSEMSESRQGRGS 647 >gi|163644323 MCF.2 cell line derived transforming sequence-like isoform b [Homo sapiens] Length = 1129 Score = 84.3 bits (207), Expect = 6e-16 Identities = 137/595 (23%), Positives = 234/595 (39%), Gaps = 78/595 (13%) Query: 575 RSRIACLPGGRDRAGRPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAV 634 + R A L GGR + G P++ E P E +++YL +IP +D G + Sbjct: 51 KKRFAYLSGGRGQDGSPVITFPDYPAFSEIP---DKEFQNVMTYLTSIPSLQDAGIGFIL 107 Query: 635 LIDARRQPPQPGLVSALQATQAQVPASIRAILFLGEKEAALQLQTLPD------------ 682 +ID RR S L+ A PA+++ +L L + +TL D Sbjct: 108 VIDRRRDKWTSVKASVLRIA-ASFPANLQLVLVL--RPTGFFQRTLSDIAFKFNRDDFKM 164 Query: 683 -VQVEVLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQA 741 V V +L+S+ L ++D SQL L G YCH+ W+ ++ F + Q + +LQ+ Sbjct: 165 KVPVIMLSSVPDLHGYIDKSQLTEDLGGTLDYCHSRWLCQRTAIESFALMVKQTAQMLQS 224 Query: 742 SIEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGA---TLARLQHDASR 798 E + + P +Q + L E + D L +EG + +L LQ + S Sbjct: 225 FGTELAETELPNDVQSTSSVLCAHTEKKDKAKEDLRL--ALKEGHSVLESLRELQAEGSE 282 Query: 799 LDFSPDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELRVRLGRLEAAIHQVSDWME 858 + D + A L + ++E KLE ++L E +V ++ Sbjct: 283 PSVNQDQLDNQATVQRLLAQLNETEAAFDEFWAKHQQKLEQCLQLRHFEQGFREVKAILD 342 Query: 859 QEGRRCLQSLTPKDGSLETVEKAHAEFENFFLQAAAQYRRGLELSKQAAQLGATARGAGE 918 ++ + + T SL VE + +F ++ R LS QL A + Sbjct: 343 AASQK-IATFTDIGNSLAHVEHLLRDLASFEEKSGVAVERARALSLDGEQLIGNKHYAVD 401 Query: 919 AERAEFPELAAFASTQRAFQAELTHFYMAAERQRTDLETLLHLHRFCK-RMTWFHMDCQD 977 + R + EL F AE+ R+R L L LHR + M W C + Sbjct: 402 SIRPKCQELRHLCD---QFSAEIA-------RRRGLLSKSLELHRRLETSMKW----CDE 447 Query: 978 ---LMAQLRLDKTSRVSPGDQ--RRLHRYLQRLASEFPAEKLAAVGLQVASLSRAGLGQE 1032 L+A +DK + + + ++L+ +E ++L A+ + S+ L Q+ Sbjct: 448 GIYLLASQPVDKCQSQDGAEAALQEIEKFLE-TGAENKIQELNAIYKEYESI----LNQD 502 Query: 1033 LWEEARIRHEEIRMLLEKALTHSSCPEAPAAHSARPERRGVAAKGQGVSVEVTSKGRWDQ 1092 L E R ++ + E + + AA RP Q V+ Sbjct: 503 LMEHVRKVFQKQASMEEVFHRRQASLKKLAARQTRPV--------QPVA----------- 543 Query: 1093 PPLDSLGMDHLPKSYWPPGPPRGEQNRTFQAGS----PPQEA-GQAAEAEDGKGS 1142 P ++L P PG RG +N + + G+ P + A + +E+ G+GS Sbjct: 544 PRPEALAKSPCPS----PGIRRGSENSSSEGGALRRGPYRRAKSEMSESRQGRGS 594 >gi|45439359 triple functional domain (PTPRF interacting) [Homo sapiens] Length = 3097 Score = 69.7 bits (169), Expect = 2e-11 Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 9/229 (3%) Query: 573 VFRSRIACLPGGRDRAGRPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGL 632 + + ++A L GGRD+ G P+L T ++ +L+SYL IP E +G Sbjct: 68 ILKEKVAYLSGGRDKRGGPIL---TFPARSNHDRIRQEDLRRLISYLACIPSEEVCKRGF 124 Query: 633 AVLIDARRQPPQPGLVSALQATQAQVPASIRAILFLGEKEAALQLQT---LPDVQVEV-L 688 V++D R + L+ Q P I L + + +T + E + Sbjct: 125 TVIVDMRGSK-WDSIKPLLKILQESFPCCIHVALIIKPDNFWQKQRTNFGSSKFEFETNM 183 Query: 689 TSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQASIEEFEK 748 SL+ L+ VDPSQL +G Y H EW+ + ++++ S L+ + K Sbjct: 184 VSLEGLTKVVDPSQLTPEFDGCLEYNHEEWIEIRVAFEDYISNATHMLSRLEELQDILAK 243 Query: 749 ADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGATLARLQHDAS 797 + P ++ A + + +L + V++ P + L EG L R+Q S Sbjct: 244 KELPQDLEGARNMIEEHSQLKKKVIKAP-IEDLDLEGQKLLQRIQSSES 291 Score = 36.6 bits (83), Expect = 0.15 Identities = 60/293 (20%), Positives = 111/293 (37%), Gaps = 34/293 (11%) Query: 717 EWVHFFQKLDP--FLADL----HQASSLLQASIEEFEKA----DPPGGMQEATRCLSKSK 766 EW F LD L D+ HQ + ++++ + KA D P +Q+ + + Sbjct: 429 EWKAFAAALDERSTLLDMSSIFHQKAEKYMSNVDSWCKACGEVDLPSELQDLEDAIHHHQ 488 Query: 767 ELMEAVLRDPGLLGLQREGGATLARLQHDAS--RLDFSPDVRSHLAAATALYSLVDEQLH 824 + E + + ++G + L +LQ + D ++ A + ++ E LH Sbjct: 489 GIYEHITL--AYSEVSQDGKSLLDKLQRPLTPGSSDSLTASANYSKAVHHVLDVIHEVLH 546 Query: 825 VLVTASNSLLGK---LELRVRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSL---ETV 878 N + L R++L + + QV DW+E G L T SL + Sbjct: 547 HQRQLENIWQHRKVRLHQRLQLCVFQQDVQQVLDWIENHGEAFLSKHTGVGKSLHRARAL 606 Query: 879 EKAHAEFENFFLQAAAQYRRGLELSKQAAQLGATARGAGEAERAEFPELAAFASTQRAFQ 938 +K H +FE + LE ++Q AQ GE + E + A + Sbjct: 607 QKRHEDFEEVAQNTYTNADKLLEAAEQLAQ-------TGECDPEEIYQAA------HQLE 653 Query: 939 AELTHFYMAAERQRTDLETLLHLHRFCKRM-TWFHMDCQDLMAQLRLDKTSRV 990 + F E+++ L+ + H K + TW ++L+ + + V Sbjct: 654 DRIQDFVRRVEQRKILLDMSVSFHTHVKELWTWLEELQKELLDDVYAESVEAV 706 >gi|148839466 kalirin, RhoGEF kinase isoform 1 [Homo sapiens] Length = 2986 Score = 68.9 bits (167), Expect = 3e-11 Identities = 78/351 (22%), Positives = 144/351 (41%), Gaps = 19/351 (5%) Query: 573 VFRSRIACLPGGRDRAGRPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGL 632 + + ++A + GGRD+ G P+L T ++ KL++YL ++P + +G Sbjct: 38 ILKEKVAFVSGGRDKRGGPIL---TFPARSNHDRIRQEDLRKLVTYLASVPSEDVCKRGF 94 Query: 633 AVLIDARRQPPQPGLVSALQAT-QAQVPASIRAILFLGE----KEAALQLQTLPDVQVEV 687 V+ID R + L+ L T Q PA I L + ++ + + Sbjct: 95 TVIIDMRGS--KWDLIKPLLKTLQEAFPAEIHVALIIKPDNFWQKQKTNFGSSKFIFETS 152 Query: 688 LTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQASIEEFE 747 + S++ L+ VDPSQL +G Y H EW+ L+ F S L+ E Sbjct: 153 MVSVEGLTKLVDPSQLTEEFDGSLDYNHEEWIELRLSLEEFFNSAVHLLSRLEDLQEMLA 212 Query: 748 KADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGATLARLQ-----HDASRLDFS 802 + + P ++ + R + + +L + VL+ P + L REG L ++ + + S Sbjct: 213 RKEFPVDVEGSRRLIDEHTQLKKKVLKAP-VEELDREGQRLLQCIRCSDGFSGRNCIPGS 271 Query: 803 PDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGR 862 D +S + T+L + L + KL+ +L E ++ DW+ Sbjct: 272 ADFQSLVPKITSLLDKLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWISHNKE 331 Query: 863 RCLQSLTPKDGSLE---TVEKAHAEFENFFLQAAAQYRRGLELSKQAAQLG 910 LQS T S + ++ H F + A R + ++ + ++ G Sbjct: 332 LFLQSHTEIGVSYQYALDLQTQHNHFAMNSMNAYVNINRIMSVASRLSEAG 382 Score = 43.1 bits (100), Expect = 0.002 Identities = 78/347 (22%), Positives = 129/347 (37%), Gaps = 61/347 (17%) Query: 717 EWVHFFQKLDP------FLADLHQASSLLQASIEEFEKADPPGG----MQEATRCLSKSK 766 EW F LD A HQ + + ++ + K GG MQ+ + + Sbjct: 399 EWKSFAAALDERSTILAMSAVFHQKAEQFLSGVDAWCKMCSEGGLPSEMQDLELAIHHHQ 458 Query: 767 ELMEAVLRDPGLLGLQREGGATLARLQHDASRLDFSPDVRSHLAAATALYS--------L 818 L E V + + ++G A L LQ S S ATA YS + Sbjct: 459 TLYEQVTQ--AYTEVSQDGKALLDVLQRPLS------PGNSESLTATANYSKAVHQVLDV 510 Query: 819 VDEQLHV---LVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSL 875 V E LH L + +L R++L + + QV DW+E G L T SL Sbjct: 511 VHEVLHHQRRLESIWQHRKVRLHQRLQLCVFQQDVQQVLDWIENHGEAFLSKHTGVGKSL 570 Query: 876 E---TVEKAHAEFENFFLQAAAQYRRGLELSKQAAQLGATARGAGEAERAEFPELAAFAS 932 ++K H +FE + LE ++Q AQ GE + E + A Sbjct: 571 HRARALQKRHDDFEEVAQNTYTNADKLLEAAEQLAQ-------TGECDPEEIYKAA---- 619 Query: 933 TQRAFQAELTHFYMAAERQRTDLETLLHLHRFCKRM-TWFHMDCQDLMAQLRLDKTSRVS 991 R + + F E+++ L+ + H K + TW ++++ + D V Sbjct: 620 --RHLEVRIQDFVRRVEQRKLLLDMSVSFHTHTKELWTWMEDLQKEMLEDVCADSVDAV- 676 Query: 992 PGDQRRLHRYLQRLASEFPAEKLAAVGLQVASLSRAGLGQELWEEAR 1038 Q L +F ++ A + A+L+ G++L ++ R Sbjct: 677 -----------QELIKQFQQQQTATLD---ATLNVIKEGEDLIQQLR 709 Score = 32.7 bits (73), Expect = 2.1 Identities = 40/170 (23%), Positives = 64/170 (37%), Gaps = 17/170 (10%) Query: 810 AAATALYSLVDEQLHVLVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGRRCLQSLT 869 A L + E+ H L + +LE ++L L+A + QV W+ + G L + Sbjct: 859 AQVQELLEFLHEKQHELELNAEQTHKRLEQCLQLRHLQAEVKQVLGWI-RNGESMLNASL 917 Query: 870 PKDGSLETVEKAHAEFENFFL---------------QAAAQYRRGLELSKQAAQLGATA- 913 SL E+ E E F L Q+A Q ++ E+ QA A A Sbjct: 918 VNASSLSEAEQLQREHEQFQLAIESLFHATSLQKTHQSALQVQQKAEVLLQAGHYDADAI 977 Query: 914 RGAGEAERAEFPELAAFASTQRAFQAELTHFYMAAERQRTDLETLLHLHR 963 R E + +L + FY +E+ + LE+L +R Sbjct: 978 RECAEKVALHWQQLMLKMEDRLKLVNASVAFYKTSEQVCSVLESLEQEYR 1027 >gi|4504335 kalirin, RhoGEF kinase isoform 2 [Homo sapiens] Length = 1663 Score = 68.9 bits (167), Expect = 3e-11 Identities = 78/351 (22%), Positives = 144/351 (41%), Gaps = 19/351 (5%) Query: 573 VFRSRIACLPGGRDRAGRPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGL 632 + + ++A + GGRD+ G P+L T ++ KL++YL ++P + +G Sbjct: 38 ILKEKVAFVSGGRDKRGGPIL---TFPARSNHDRIRQEDLRKLVTYLASVPSEDVCKRGF 94 Query: 633 AVLIDARRQPPQPGLVSALQAT-QAQVPASIRAILFLGE----KEAALQLQTLPDVQVEV 687 V+ID R + L+ L T Q PA I L + ++ + + Sbjct: 95 TVIIDMRGS--KWDLIKPLLKTLQEAFPAEIHVALIIKPDNFWQKQKTNFGSSKFIFETS 152 Query: 688 LTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQASIEEFE 747 + S++ L+ VDPSQL +G Y H EW+ L+ F S L+ E Sbjct: 153 MVSVEGLTKLVDPSQLTEEFDGSLDYNHEEWIELRLSLEEFFNSAVHLLSRLEDLQEMLA 212 Query: 748 KADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGATLARLQ-----HDASRLDFS 802 + + P ++ + R + + +L + VL+ P + L REG L ++ + + S Sbjct: 213 RKEFPVDVEGSRRLIDEHTQLKKKVLKAP-VEELDREGQRLLQCIRCSDGFSGRNCIPGS 271 Query: 803 PDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGR 862 D +S + T+L + L + KL+ +L E ++ DW+ Sbjct: 272 ADFQSLVPKITSLLDKLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWISHNKE 331 Query: 863 RCLQSLTPKDGSLE---TVEKAHAEFENFFLQAAAQYRRGLELSKQAAQLG 910 LQS T S + ++ H F + A R + ++ + ++ G Sbjct: 332 LFLQSHTEIGVSYQYALDLQTQHNHFAMNSMNAYVNINRIMSVASRLSEAG 382 Score = 43.1 bits (100), Expect = 0.002 Identities = 78/347 (22%), Positives = 129/347 (37%), Gaps = 61/347 (17%) Query: 717 EWVHFFQKLDP------FLADLHQASSLLQASIEEFEKADPPGG----MQEATRCLSKSK 766 EW F LD A HQ + + ++ + K GG MQ+ + + Sbjct: 399 EWKSFAAALDERSTILAMSAVFHQKAEQFLSGVDAWCKMCSEGGLPSEMQDLELAIHHHQ 458 Query: 767 ELMEAVLRDPGLLGLQREGGATLARLQHDASRLDFSPDVRSHLAAATALYS--------L 818 L E V + + ++G A L LQ S S ATA YS + Sbjct: 459 TLYEQVTQ--AYTEVSQDGKALLDVLQRPLS------PGNSESLTATANYSKAVHQVLDV 510 Query: 819 VDEQLHV---LVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSL 875 V E LH L + +L R++L + + QV DW+E G L T SL Sbjct: 511 VHEVLHHQRRLESIWQHRKVRLHQRLQLCVFQQDVQQVLDWIENHGEAFLSKHTGVGKSL 570 Query: 876 E---TVEKAHAEFENFFLQAAAQYRRGLELSKQAAQLGATARGAGEAERAEFPELAAFAS 932 ++K H +FE + LE ++Q AQ GE + E + A Sbjct: 571 HRARALQKRHDDFEEVAQNTYTNADKLLEAAEQLAQ-------TGECDPEEIYKAA---- 619 Query: 933 TQRAFQAELTHFYMAAERQRTDLETLLHLHRFCKRM-TWFHMDCQDLMAQLRLDKTSRVS 991 R + + F E+++ L+ + H K + TW ++++ + D V Sbjct: 620 --RHLEVRIQDFVRRVEQRKLLLDMSVSFHTHTKELWTWMEDLQKEMLEDVCADSVDAV- 676 Query: 992 PGDQRRLHRYLQRLASEFPAEKLAAVGLQVASLSRAGLGQELWEEAR 1038 Q L +F ++ A + A+L+ G++L ++ R Sbjct: 677 -----------QELIKQFQQQQTATLD---ATLNVIKEGEDLIQQLR 709 Score = 32.7 bits (73), Expect = 2.1 Identities = 40/170 (23%), Positives = 64/170 (37%), Gaps = 17/170 (10%) Query: 810 AAATALYSLVDEQLHVLVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGRRCLQSLT 869 A L + E+ H L + +LE ++L L+A + QV W+ + G L + Sbjct: 859 AQVQELLEFLHEKQHELELNAEQTHKRLEQCLQLRHLQAEVKQVLGWI-RNGESMLNASL 917 Query: 870 PKDGSLETVEKAHAEFENFFL---------------QAAAQYRRGLELSKQAAQLGATA- 913 SL E+ E E F L Q+A Q ++ E+ QA A A Sbjct: 918 VNASSLSEAEQLQREHEQFQLAIESLFHATSLQKTHQSALQVQQKAEVLLQAGHYDADAI 977 Query: 914 RGAGEAERAEFPELAAFASTQRAFQAELTHFYMAAERQRTDLETLLHLHR 963 R E + +L + FY +E+ + LE+L +R Sbjct: 978 RECAEKVALHWQQLMLKMEDRLKLVNASVAFYKTSEQVCSVLESLEQEYR 1027 >gi|188528641 SEC14 and spectrin domains 1 [Homo sapiens] Length = 696 Score = 60.8 bits (146), Expect = 7e-09 Identities = 107/479 (22%), Positives = 189/479 (39%), Gaps = 68/479 (14%) Query: 573 VFRSRIACLPGGRDRAGRPLLLVSTTEGAWEAPWC----TVSEVTKLLSYLCTIPRPEDK 628 + + ++A L GG+DR +L + P C + E++ L YL +IP + K Sbjct: 9 ILKKKLAFLSGGKDRRSGLILTI---------PLCLEQTNMDELSVTLDYLLSIPSEKCK 59 Query: 629 AKGLAVLIDARRQPPQPGLV-SALQATQAQVPASIRAILFLGEKEAALQLQTLPDVQVE- 686 A+G V++D R+ Q +V + + Q VPA + + + E + T E Sbjct: 60 ARGFTVIVDGRKS--QWNVVKTVVVMLQNVVPAEVSLVCVVKPDEFWDKKVTHFCFWKEK 117 Query: 687 -------VLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLL 739 +L S L+ +++P QL G Y H +W++ + F + S+ L Sbjct: 118 DRLGFEVILVSANKLTRYIEPCQLTEDFGGSLTYDHMDWLNKRLVFEKFTKE----STSL 173 Query: 740 QASIEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGATLARLQH----- 794 + G QE R S +L DP + + G L+ LQ Sbjct: 174 LDELALINNGSDKGNQQEKER----SVDLNFLPSVDPET--VLQTGHELLSELQQRRFNG 227 Query: 795 DASRLDFSPDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELRVRLGRLEAAIHQVS 854 + +SP + L A + L+D L T + + R +L ++ + QV Sbjct: 228 SDGGVSWSP-MDDELLAQPQVMKLLD-SLREQYTRYQEVCRQRSKRTQLEEIQQKVMQVV 285 Query: 855 DWMEQEGRRCLQSLTPKDGSL---ETVEKAHAEFENFFLQAAAQYRRGLELSKQAAQLGA 911 +W+E G L++ S+ + +++ H E E+ + A Y +EL++Q A L Sbjct: 286 NWLEGPGSEQLRAQWGIGDSIRASQALQQKHEEIESQHSEWFAVY---VELNQQIAAL-- 340 Query: 912 TARGAGEAERAEFPELAAFASTQRAFQAELTHFYMAAERQRTDLETLLHLHRFCKRMTWF 971 AG+ E +L S Q+ E ++ L+ L H + ++ Sbjct: 341 --LNAGDEE-----DLVELKSLQQQLSDVCYRQASQLEFRQNLLQAALEFHGVAQDLS-- 391 Query: 972 HMDCQDLMAQLRLDKTSRVSPGDQRRLHRYLQRLASEFPAEKLAAVGLQVASLSRAGLG 1030 L+ L +D V+P D + + L+ L EKL +V + + L G G Sbjct: 392 -QQLDGLLGMLCVD----VAPADGASIQQTLKLL-----EEKLKSVDVGLQGLREKGQG 440 >gi|153791628 MCF.2 cell line derived transforming sequence isoform a [Homo sapiens] Length = 985 Score = 59.3 bits (142), Expect = 2e-08 Identities = 53/245 (21%), Positives = 103/245 (42%), Gaps = 20/245 (8%) Query: 612 VTKLLSYLCTIPRPEDKAKGLAVLIDARRQPPQPGLVSALQATQAQVPASIRAILFLGEK 671 + K+L+YL +I R +++D RR L +LQ A P ++ +L L + Sbjct: 35 IAKVLTYLTSIARQNGSDSRFTIILD-RRLDTWSSLKISLQKISASFPGNLHLVLVL--R 91 Query: 672 EAALQLQTLPDV-------------QVEVLTSLKALSHHVDPSQLPAVLEGPFPYCHTEW 718 + +T D+ V +L+S+ L ++D QL L G YCH+EW Sbjct: 92 PTSFLQRTFTDIGFWFSQEDFMLKLPVVMLSSVSDLLTYIDDKQLTPELGGTLQYCHSEW 151 Query: 719 VHFFQKLDPFLADLHQASSLLQASIEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGL 778 + F ++ F + + + +LQ+ E + + P + L+ E + D + Sbjct: 152 IIFRNAIENFALTVKEMAQMLQSFGTELAETELPDDIPSIEEILAIRAERYHLLKND--I 209 Query: 779 LGLQREGGATLARLQHDASRLDFSPDVRSH--LAAATALYSLVDEQLHVLVTASNSLLGK 836 + +EG L L+ + S + H ++ + + Q+H + TA + K Sbjct: 210 TAVTKEGKILLTNLEVPDTEGAVSSRLECHRQISGDWQTINKLLTQVHDMETAFDGFWEK 269 Query: 837 LELRV 841 +L++ Sbjct: 270 HQLKM 274 >gi|31742505 Rho family guanine-nucleotide exchange factor [Homo sapiens] Length = 1114 Score = 56.2 bits (134), Expect = 2e-07 Identities = 53/241 (21%), Positives = 99/241 (41%), Gaps = 21/241 (8%) Query: 571 VKVFRSRIACLPGGRDRAGRPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAK 630 ++ + A L GGR G P++ G P + +++YL +IP E + Sbjct: 42 IEQLHRQFAILSGGRGEDGAPIITFPEFSGFKHIP---DEDFLNVMTYLTSIPSVEAASI 98 Query: 631 GLAVLIDARRQPPQPGLVSALQATQAQVPASIRAILFLGEKEAALQLQTLPDVQVE---- 686 G V+ID RR+ + ++L P +++ I L + + +T D+ ++ Sbjct: 99 GFIVVID-RRRDKWSSVKASLTRIAVAFPGNLQLIFIL--RPSRFIQRTFTDIGIKYYRN 155 Query: 687 ---------VLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQASS 737 ++ S+ L ++D SQL L G Y H +WV+ ++ F L + Sbjct: 156 EFKTKVPIIMVNSVSDLHGYIDKSQLTRELGGTLEYRHGQWVNHRTAIENFALTLKTTAQ 215 Query: 738 LLQASIEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGATLARLQHDAS 797 +LQ A+ P M L + + + LLG ++G L+ +Q A+ Sbjct: 216 MLQTFGSCLATAELPRSMLSTEDLLMSHTRQRDKLQDELKLLG--KQGTTLLSCIQEPAT 273 Query: 798 R 798 + Sbjct: 274 K 274 >gi|91208420 bassoon protein [Homo sapiens] Length = 3926 Score = 53.5 bits (127), Expect = 1e-06 Identities = 100/426 (23%), Positives = 160/426 (37%), Gaps = 74/426 (17%) Query: 199 QAWGPLPLEALDL--SSPQELHQASSPDNQVLPAQSLAKGKGRTYGSKYPGLIKVEQARC 256 Q GP L + + ++ +E QA+ P + PA SL ++++ QA Sbjct: 1217 QPTGPRGLGSFEYQDTTDREYGQAAQPAAEGTPA-SLGAAVYEEILQTSQSIVRMRQASS 1275 Query: 257 GEVAFRMDEVVSQDFEGDYVALLGFSQESRGE-----SPSREAG-------TSSGCTSGA 304 ++AF D+ + F A + +++ G SP++ A TSS + G Sbjct: 1276 RDLAFAEDKKKEKQFLNAESAYMDPMKQNGGPLTPGTSPTQLAAPVSFSTPTSSDSSGGR 1335 Query: 305 L-------EEIAGTKETPLFQKILPLSEANEGPSLG---NRACTKPESSEERPYNLGFRR 354 + + A + PL P S ++ +G ++ P ++ P G R Sbjct: 1336 VIPDVRVTQHFAKETQDPLKLHSSPASPSSASKEIGMPFSQGPGTPATTAVAPCPAGLPR 1395 Query: 355 KVNLKAPTHNSERPPQGS--------------YMNVLEDALDCASGLRAG--VSQEPAAS 398 A SER P S Y + ED SGL A ++E S Sbjct: 1396 GYMTPASPAGSERSPSPSSTAHSYGHSPTTANYGSQTEDLPQAPSGLAAAGRAAREKPLS 1455 Query: 399 KMQGPLGNPENMVQLRPGPRQA------SSPRLSPASPAAAASETKIEV---KTKERNGR 449 G G P+ P +A SSP LSP+SP+ + + + ++ T E + + Sbjct: 1456 ASDGEGGTPQ--------PSRAYSYFASSSPPLSPSSPSESPTFSPGKMGPRATAEFSTQ 1507 Query: 450 LPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPKPN 509 P P P S SP PTP + Q + TP + S P V P Sbjct: 1508 TPSPAPA-SDMPRSPGAPTPSPMVA------QGTQTPHRPST----PRLVWQESSQEAPF 1556 Query: 510 RAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERGPTLEE---EPPGPE--P 564 +L ++QT+ + + SPL P S P++ + EPPGP P Sbjct: 1557 MVITLASDASSQTRMVHASASTSPLCSPTETQPTTHGYSQTTPPSVSQLPPEPPGPPGFP 1616 Query: 565 RIGALG 570 R+ + G Sbjct: 1617 RVPSAG 1622 Score = 41.6 bits (96), Expect = 0.005 Identities = 57/235 (24%), Positives = 85/235 (36%), Gaps = 34/235 (14%) Query: 380 ALDCASGLRAGVSQEPAASKMQGPLGNPENMV-QLRPGPRQASSPRLSPASPAAAASETK 438 A D G R S A P P+ Q PGP+Q+ SP AA+ + + Sbjct: 3718 ASDSKKGSRQAHSGPAALQSKAEPQAQPQLQGRQAAPGPQQSQSPSSRQIPSGAASRQPQ 3777 Query: 439 IEVKTKERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWK 498 + + + + P+ +R +P T G QP+ P+ GP Sbjct: 3778 TQQQQQGLGLQPPQQALTQARLQQQSQPTTRG----SAPAASQPAGKPQPGPSTATGPQP 3833 Query: 499 VLCSLYSPKPNRAKSLGKAGTTQTKTSG------PATAPSPLTEEKAALPEASAGSPERG 552 + P ++ G GT + G PA P P + A P + G+P Sbjct: 3834 ------AGPPRAEQTNGSKGTAKAPQQGRAPQAQPAPGPGPAGVKAGARPGGTPGAPAGQ 3887 Query: 553 PTLEEEPPGPEPRIGALGVKVFRSRIACLPGG-RDRAGRPLLLVSTTEGAWEAPW 606 P GA G VF S+I LPGG ++AG+ VS + + W Sbjct: 3888 P-------------GADGESVF-SKI--LPGGAAEQAGKLTEAVSAFGKKFSSFW 3926 Score = 35.8 bits (81), Expect = 0.25 Identities = 41/158 (25%), Positives = 60/158 (37%), Gaps = 26/158 (16%) Query: 448 GRLPKPMPCPSRNTSSPEPPTPG-------LKFSFLRGQRQPS-VTPEKASLQHNGPWKV 499 G L +P P P + P P LK +G QPS P KAS Sbjct: 523 GSLGEPTPLPPPTSQQPPVGAPHRASGTSPLKQKGPQGLGQPSGPLPAKAS--------P 574 Query: 500 LCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERGPTLEEEP 559 L + SP P++A K + S P+ PS + E+K +P + P+ P P Sbjct: 575 LSTKASPLPSKASPQAKP----LRASEPSKTPSSVQEKKTRVPTKAEPMPKPPPETTPTP 630 Query: 560 PGPEPRIGALGVKVFRSRIACLP----GG--RDRAGRP 591 P+ + G + + +P GG D G+P Sbjct: 631 ATPKVKSGVRRAEPATPVVKAVPEAPKGGEAEDLVGKP 668 Score = 34.3 bits (77), Expect = 0.73 Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 26/190 (13%) Query: 420 ASSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPPTP----GLKFSF 475 ASS RL+ A + + + R LP+PM R+ S P+P +P K F Sbjct: 2812 ASSERLNKAH---VSPQKHFTADSALRQQTLPRPMKTLQRSLSDPKPLSPTAEESAKERF 2868 Query: 476 LRGQRQPSVTPEKASLQHNG-PWKVLCSLYSPKPNRA---------KSLGKAGTTQTKTS 525 Q Q + + ++L N KV +L SP P A L A Q + Sbjct: 2869 SLYQHQGGLGSQVSALPPNSLVRKVKRTLPSPPPEEAHLPLAGQASPQLYAASLLQRGLT 2928 Query: 526 GPATAPS-------PLTEEKAALPEASAGSPERGPTLEEEPPGPEPRIG--ALGVKVFRS 576 GP T P+ L + + S ++ L+EE + ++ LG+ + Sbjct: 2929 GPTTVPATKASLLRELDRDLRLVEHESTKLRKKQAELDEEEKEIDAKLKYLELGITQRKE 2988 Query: 577 RIACLPGGRD 586 +A GGRD Sbjct: 2989 SLAKDRGGRD 2998 Score = 32.3 bits (72), Expect = 2.8 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 15/80 (18%) Query: 395 PAASKMQGPLGNPENMVQL-----RPGPRQASSPR-LSPASPAAAASETKIEVKTKERNG 448 PA S + PLG P+ +PG RQA + R S PA AA+ ++ G Sbjct: 249 PAHSPAKQPLGKPDQERSRGPGGPQPGSRQAETARATSVPGPAQAAAPPEV--------G 300 Query: 449 RLPKPMPCPSR-NTSSPEPP 467 R+ P P++ +T+ P PP Sbjct: 301 RVSPQPPQPTKPSTAEPRPP 320 Score = 31.6 bits (70), Expect = 4.7 Identities = 19/68 (27%), Positives = 29/68 (42%) Query: 503 LYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERGPTLEEEPPGP 562 +Y KP AK+ G G ++ + A PL A + +AG+P P ++PP Sbjct: 2280 VYLGKPAAAKAPGAGGPSRPEMPVGAAREEPLPTTTPAAIKEAAGAPAPAPLAGQKPPAD 2339 Query: 563 EPRIGALG 570 G G Sbjct: 2340 AAPGGGSG 2347 >gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] Length = 904 Score = 52.0 bits (123), Expect = 3e-06 Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 18/176 (10%) Query: 388 RAGVSQEPAASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKTKE-R 446 R S P + P P+ V P P+Q SSP SP+ ++ K ++ R Sbjct: 612 RRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTR 671 Query: 447 NGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSP 506 R P+P R++ SP P P S +R S +P++ SP Sbjct: 672 EARSPQPN---KRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQ--------------SP 714 Query: 507 KPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERGPTLEEEPPGP 562 P+ + T + K A +PSP + + + + +GSPE PP P Sbjct: 715 SPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSP 770 Score = 35.4 bits (80), Expect = 0.33 Identities = 39/180 (21%), Positives = 58/180 (32%), Gaps = 19/180 (10%) Query: 395 PAASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPM 454 P P P + P P+Q++ R S S + + K+ P P Sbjct: 395 PRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPA 454 Query: 455 PCPSRNTSSPEPPTPGLKFSF---------LRGQRQPSVTPEKASLQHNGPWKVLCSLYS 505 P P + S G K + R Q Q S + +S Sbjct: 455 PKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDE--------R 506 Query: 506 PKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEA-SAGSPERGPTLEEEPPGPEP 564 PK + K+ G+ G + + + +PSP +K P SP PT P P P Sbjct: 507 PKRSHVKN-GEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAP 565 Score = 35.0 bits (79), Expect = 0.43 Identities = 39/155 (25%), Positives = 56/155 (36%), Gaps = 25/155 (16%) Query: 416 GPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEP--------- 466 G R+ SP S +A+ S K + +T R R P P P+R SP P Sbjct: 518 GRRRRHSP-----SRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRT 572 Query: 467 PTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSG 526 PTP + +R PS P + S + YSP P + + + Sbjct: 573 PTPPPR------RRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS 626 Query: 527 PATAPSPLTEEKAALPEASAGSP---ERGPTLEEE 558 P +P P + P SP R P+L + Sbjct: 627 P--SPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSK 659 Score = 32.7 bits (73), Expect = 2.1 Identities = 37/154 (24%), Positives = 54/154 (35%), Gaps = 18/154 (11%) Query: 414 RPGPRQASSPRLSPASPAAAASETKIEVK-----------TKERNGRLPKPMPCPSRNTS 462 RP PR+ + PR P P S + + + + + R P P + TS Sbjct: 320 RPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTS 379 Query: 463 SPEPPTPGLKFSFLRGQRQ----PSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAG 518 SP T L S +R+ P TP + P + S + K + S G+ Sbjct: 380 SPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQ---SNRTRKSRVSVSPGRTS 436 Query: 519 TTQTKTSGPATAPSPLTEEKAALPEASAGSPERG 552 TK G SP K E S ++G Sbjct: 437 GKVTKHKGTEKRESPSPAPKPRKVELSESEEDKG 470 Score = 31.6 bits (70), Expect = 4.7 Identities = 36/160 (22%), Positives = 54/160 (33%), Gaps = 31/160 (19%) Query: 406 NPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPE 465 +P P PR+ SSP + + S +TK R+ P P P + +PE Sbjct: 171 SPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRH---RTKSRS-----PSPAPEKKEKTPE 222 Query: 466 PPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTS 525 P P +K ++PSV ++ L PKP + K Sbjct: 223 LPEPSVKV------KEPSVQEATSTSD---------ILKVPKPE--------PIPEPKEP 259 Query: 526 GPATAPSPLTEEKAALPEASAGSPERGPTLEEEPPGPEPR 565 P E++ P + + S R T P PR Sbjct: 260 SPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPR 299 >gi|18079216 CASK interacting protein 1 [Homo sapiens] Length = 1431 Score = 51.6 bits (122), Expect = 4e-06 Identities = 55/177 (31%), Positives = 67/177 (37%), Gaps = 31/177 (17%) Query: 406 NPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPS----RNT 461 N V+ RP QA P L P P A T + LP P+P P + Sbjct: 1172 NGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDL--------AHLP-PLPPPEGEARKPA 1222 Query: 462 SSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQ 521 P P P L + Q P+ T +K L G SP+ RA G Sbjct: 1223 KPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPG---------SPEVKRAH--GTPPPVS 1271 Query: 522 TKTSGPATAPSPLTEEKAALPEASAG-----SPERGPTLE-EEPPGPEPRIGALGVK 572 K P TAP P+ + A LP SAG SP R P +PPG P +GA K Sbjct: 1272 PKPPPPPTAPKPV-KAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAK 1327 >gi|41281612 zinc finger protein 828 [Homo sapiens] Length = 812 Score = 49.3 bits (116), Expect = 2e-05 Identities = 51/177 (28%), Positives = 67/177 (37%), Gaps = 28/177 (15%) Query: 395 PAASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPM 454 PA S LG+ + +P P L+P P S E++T LP P Sbjct: 128 PALSMETQKLGSVLSPESPKPTP-------LTPLEPQKPGSVVSPELQTP-----LPSPE 175 Query: 455 PCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSL 514 P + SSPEPP + PS P+K + P V +L +PKP + Sbjct: 176 PSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPA--PVSPESVKATLSNPKPQKQSHF 233 Query: 515 GKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERGP-------TLEEEPPGPEP 564 +T GP +A SP + AA PE SP P T EP P P Sbjct: 234 -------PETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSP 283 Score = 32.0 bits (71), Expect = 3.6 Identities = 69/302 (22%), Positives = 99/302 (32%), Gaps = 63/302 (20%) Query: 290 PSREAGTSSG--------CTSGALEEIAGTKETPLFQKILPLSEANEGPSLGNRACTKPE 341 PS+ A SS C S L + +P QK P+S + +L N KP+ Sbjct: 176 PSKPASVSSPEPPKSVPVCESQKLAPVP----SPEPQKPAPVSPESVKATLSN---PKPQ 228 Query: 342 SSEERPYNLGFRRKVNLKAPTHNSERPPQGSYMNVLEDALDCASGLRAGVSQEPAASKMQ 401 P LG + ++P + P G ++ A S EP + Sbjct: 229 KQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSART----TSPEP---RKP 281 Query: 402 GPLGNPEN---MVQLRPGPRQASSPRLSPAS--PAAAASETKIEVKTKERNGRLPKPMPC 456 P +PE + P PR+ + P +SP S P S + +G P Sbjct: 282 SPSESPEPWKPFPAVSPEPRRPA-PAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPA 340 Query: 457 PSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPK--------- 507 PS SP P P PSV+P GPWK S+ S Sbjct: 341 PS---VSPGPWKP-----------IPSVSP--------GPWKPTPSVSSASWKSSSVSPS 378 Query: 508 ----PNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERGPTLEEEPPGPE 563 P + K+G + + + P +P PE P P + PE Sbjct: 379 SWKSPPASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEIRSPAGSPE 438 Query: 564 PR 565 R Sbjct: 439 LR 440 >gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens] Length = 816 Score = 46.2 bits (108), Expect = 2e-04 Identities = 86/382 (22%), Positives = 134/382 (35%), Gaps = 53/382 (13%) Query: 202 GPLPLEALDLSSPQELHQASS---PDNQVLPAQSLAKGKGRTYGSKYPGLIKVEQARCGE 258 GPL + L +S+ + + + + P L A + G T G+ P + + +A E Sbjct: 118 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 177 Query: 259 VAFRMDEVVSQD---FEGDYVALLGFSQESRGE-SPSREAGTSSGCTSGALEEIAGTKET 314 V ++ EG ++ S+ S E SP+ S+G G L+ A Sbjct: 178 VGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG---GGLQRPASRS-- 232 Query: 315 PLFQKILPLSE-ANEGPSLGNRACTKPESSEERPYNLGFRRKVNLKAPTHNSERPPQGSY 373 L PLS A GPS S+ +P L + RPPQ + Sbjct: 233 -LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGL-------------QALRPPQVTP 278 Query: 374 MNVLEDALDCASGLRAGVSQEPAASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAA 433 +DA L + P+ S P P +Q P P PA+P + Sbjct: 279 PR--KDAAPALGPLSSSPLATPSPSAPPSPSAPPS--LQTLPSP---------PATPPSQ 325 Query: 434 ASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQH 493 A+ + + + LP P P T P+ P P L L+ P +P + L Sbjct: 326 ATTSLGSPTLQATHSFLPSP-PLSPLATPPPQAP-PALALPPLQAPPSPPASPPLSPLAT 383 Query: 494 NGPWK-------VLCSLYSPKPNRAK----SLGKAGTTQTKTSGPATAPSPLTEEKAALP 542 P +L + +SP P+ S + + P+ AP L +P Sbjct: 384 PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP 443 Query: 543 EASAGSPERGPTLEEEPPGPEP 564 + SP P+ P P P Sbjct: 444 PSPPASPPMSPSATPPPQAPPP 465 Score = 33.9 bits (76), Expect = 0.95 Identities = 46/181 (25%), Positives = 63/181 (34%), Gaps = 32/181 (17%) Query: 386 GLRAGVSQEPAASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKTKE 445 G V ++P A + G G R GP + S P PA+ E K Sbjct: 48 GAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRP------PASGRGERAPPAKNTS 101 Query: 446 RNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYS 505 P P+ P R + + P G K LR + +V KA+ + Sbjct: 102 -----PGPVSSPGRASGTTRPGPLGQKG--LRISAEETVARGKAT-------------EA 141 Query: 506 PKPNRAKSLGKAGTTQTKTSGPATA-PSPLTEEKAALPEASAGSPERGPTLEEEPPGPEP 564 PK +S AG + TSGP PSP ++ G P P+ PP P Sbjct: 142 PK----RSALSAGARRD-TSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGP 196 Query: 565 R 565 R Sbjct: 197 R 197 >gi|38787970 tensin like C1 domain containing phosphatase isoform 3 [Homo sapiens] Length = 1285 Score = 46.2 bits (108), Expect = 2e-04 Identities = 69/258 (26%), Positives = 90/258 (34%), Gaps = 34/258 (13%) Query: 369 PQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNP-ENMVQLRPGPRQASSPRLSP 427 P+G Y + AL S A S PA ++ G+P E PG + +SP Sbjct: 650 PEGRYGHPGYPALVTYSYGGAVPSYCPAYGRVPHSCGSPGEGRGYPSPGAHSPRAGSISP 709 Query: 428 ASPAAAAS-ETKIEVKTKERNGRLPKP----MPCPSRNTSSPEPPTPGLKFSFLRGQ--- 479 SP S + E+ T+E R P P P + S EP S+ G Sbjct: 710 GSPPYPQSRKLSYEIPTEEGGDRYPLPGHLASAGPLASAESLEP------VSWREGPSGH 763 Query: 480 ----RQPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLT 535 R P P AS + +GP +P + GK T + T P +AP+ Sbjct: 764 STLPRSPRDAPCSASSELSGP-------STPLHTSSPVQGKESTRRQDTRSPTSAPTQRL 816 Query: 536 EEKAALPEASAGSPERGPTLEEEPPGPEPRIGALGVKVFRSRIAC------LPGGRDRAG 589 ALP S + P L GPEP + F PGG Sbjct: 817 SPGEALPPVSQAGTGKAPEL-PSGSGPEPLAPSPVSPTFPPSSPSDWPQERSPGGHSDGA 875 Query: 590 RPLLLVSTT-EGAWEAPW 606 P V TT G APW Sbjct: 876 SPRSPVPTTLPGLRHAPW 893 Score = 33.1 bits (74), Expect = 1.6 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 354 RKVNLKAPTHNSERPPQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNPENMVQL 413 RK++ + PT +G L L A L + S EP + + +GP G+ Sbjct: 718 RKLSYEIPTE------EGGDRYPLPGHLASAGPLASAESLEPVSWR-EGPSGHSTLPRSP 770 Query: 414 RPGPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPP 467 R P ASS P++P +S + + T+ ++ R P P + PP Sbjct: 771 RDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDTRSPTSAPTQRLSPGEALPP 824 >gi|38787957 tensin like C1 domain containing phosphatase isoform 2 [Homo sapiens] Length = 1409 Score = 46.2 bits (108), Expect = 2e-04 Identities = 69/258 (26%), Positives = 90/258 (34%), Gaps = 34/258 (13%) Query: 369 PQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNP-ENMVQLRPGPRQASSPRLSP 427 P+G Y + AL S A S PA ++ G+P E PG + +SP Sbjct: 774 PEGRYGHPGYPALVTYSYGGAVPSYCPAYGRVPHSCGSPGEGRGYPSPGAHSPRAGSISP 833 Query: 428 ASPAAAAS-ETKIEVKTKERNGRLPKP----MPCPSRNTSSPEPPTPGLKFSFLRGQ--- 479 SP S + E+ T+E R P P P + S EP S+ G Sbjct: 834 GSPPYPQSRKLSYEIPTEEGGDRYPLPGHLASAGPLASAESLEP------VSWREGPSGH 887 Query: 480 ----RQPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLT 535 R P P AS + +GP +P + GK T + T P +AP+ Sbjct: 888 STLPRSPRDAPCSASSELSGP-------STPLHTSSPVQGKESTRRQDTRSPTSAPTQRL 940 Query: 536 EEKAALPEASAGSPERGPTLEEEPPGPEPRIGALGVKVFRSRIAC------LPGGRDRAG 589 ALP S + P L GPEP + F PGG Sbjct: 941 SPGEALPPVSQAGTGKAPEL-PSGSGPEPLAPSPVSPTFPPSSPSDWPQERSPGGHSDGA 999 Query: 590 RPLLLVSTT-EGAWEAPW 606 P V TT G APW Sbjct: 1000 SPRSPVPTTLPGLRHAPW 1017 Score = 33.1 bits (74), Expect = 1.6 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 354 RKVNLKAPTHNSERPPQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNPENMVQL 413 RK++ + PT +G L L A L + S EP + + +GP G+ Sbjct: 842 RKLSYEIPTE------EGGDRYPLPGHLASAGPLASAESLEPVSWR-EGPSGHSTLPRSP 894 Query: 414 RPGPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPP 467 R P ASS P++P +S + + T+ ++ R P P + PP Sbjct: 895 RDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDTRSPTSAPTQRLSPGEALPP 948 >gi|38787941 tensin like C1 domain containing phosphatase isoform 1 [Homo sapiens] Length = 1419 Score = 46.2 bits (108), Expect = 2e-04 Identities = 69/258 (26%), Positives = 90/258 (34%), Gaps = 34/258 (13%) Query: 369 PQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNP-ENMVQLRPGPRQASSPRLSP 427 P+G Y + AL S A S PA ++ G+P E PG + +SP Sbjct: 784 PEGRYGHPGYPALVTYSYGGAVPSYCPAYGRVPHSCGSPGEGRGYPSPGAHSPRAGSISP 843 Query: 428 ASPAAAAS-ETKIEVKTKERNGRLPKP----MPCPSRNTSSPEPPTPGLKFSFLRGQ--- 479 SP S + E+ T+E R P P P + S EP S+ G Sbjct: 844 GSPPYPQSRKLSYEIPTEEGGDRYPLPGHLASAGPLASAESLEP------VSWREGPSGH 897 Query: 480 ----RQPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLT 535 R P P AS + +GP +P + GK T + T P +AP+ Sbjct: 898 STLPRSPRDAPCSASSELSGP-------STPLHTSSPVQGKESTRRQDTRSPTSAPTQRL 950 Query: 536 EEKAALPEASAGSPERGPTLEEEPPGPEPRIGALGVKVFRSRIAC------LPGGRDRAG 589 ALP S + P L GPEP + F PGG Sbjct: 951 SPGEALPPVSQAGTGKAPEL-PSGSGPEPLAPSPVSPTFPPSSPSDWPQERSPGGHSDGA 1009 Query: 590 RPLLLVSTT-EGAWEAPW 606 P V TT G APW Sbjct: 1010 SPRSPVPTTLPGLRHAPW 1027 Score = 33.1 bits (74), Expect = 1.6 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 354 RKVNLKAPTHNSERPPQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNPENMVQL 413 RK++ + PT +G L L A L + S EP + + +GP G+ Sbjct: 852 RKLSYEIPTE------EGGDRYPLPGHLASAGPLASAESLEPVSWR-EGPSGHSTLPRSP 904 Query: 414 RPGPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPP 467 R P ASS P++P +S + + T+ ++ R P P + PP Sbjct: 905 RDAPCSASSELSGPSTPLHTSSPVQGKESTRRQDTRSPTSAPTQRLSPGEALPP 958 >gi|153791325 MCF.2 cell line derived transforming sequence isoform b [Homo sapiens] Length = 925 Score = 45.8 bits (107), Expect = 2e-04 Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 4/159 (2%) Query: 685 VEVLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQASIE 744 V +L+S+ L ++D QL L G YCH+EW+ F ++ F + + + +LQ+ Sbjct: 58 VVMLSSVSDLLTYIDDKQLTPELGGTLQYCHSEWIIFRNAIENFALTVKEMAQMLQSFGT 117 Query: 745 EFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGATLARLQHDASRLDFSPD 804 E + + P + L+ E + D + + +EG L L+ + S Sbjct: 118 ELAETELPDDIPSIEEILAIRAERYHLLKND--ITAVTKEGKILLTNLEVPDTEGAVSSR 175 Query: 805 VRSH--LAAATALYSLVDEQLHVLVTASNSLLGKLELRV 841 + H ++ + + Q+H + TA + K +L++ Sbjct: 176 LECHRQISGDWQTINKLLTQVHDMETAFDGFWEKHQLKM 214 >gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 855 Score = 44.7 bits (104), Expect = 5e-04 Identities = 84/388 (21%), Positives = 136/388 (35%), Gaps = 35/388 (9%) Query: 202 GPLPLEALDLSSPQELHQASS---PDNQVLPAQSLAKGKGRTYGSKYPGLIKVEQARCGE 258 GPL + L +S+ + + + + P L A + G T G+ P + + +A E Sbjct: 127 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 186 Query: 259 VAFRMDEVVSQD---FEGDYVALLGFSQESRGE-SPSREAGTSSGCTSGALEEIAGTKET 314 V ++ EG ++ S+ S E SP+ S+G G L+ A Sbjct: 187 VGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG---GGLQRPASRS-- 241 Query: 315 PLFQKILPLSE-ANEGPSLGNRACTKPESSEERPYNLGFRRKVNLKAPTHNSER---PPQ 370 L PLS A GPS S+ +P L R + P ++ P Sbjct: 242 -LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLS 300 Query: 371 GSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNPENMVQLRPGPRQASSPRLSPASP 430 S + + S + P +S + L P + P P S + P+ P Sbjct: 301 SSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAP--PSPSAPPSLQTLPSPP 358 Query: 431 AAAASETKIEVKT---KERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPE 487 A S+ + + + + LP P P T P+ P P L L+ P +P Sbjct: 359 ATPPSQATTSLGSPTLQATHSFLPSP-PLSPLATPPPQAP-PALALPPLQAPPSPPASPP 416 Query: 488 KASLQHNGPWK-------VLCSLYSPKPNRAK----SLGKAGTTQTKTSGPATAPSPLTE 536 + L P +L + +SP P+ S + + P+ AP L Sbjct: 417 LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAA 476 Query: 537 EKAALPEASAGSPERGPTLEEEPPGPEP 564 +P + SP P+ P P P Sbjct: 477 PPLQVPPSPPASPPMSPSATPPPQAPPP 504 Score = 40.8 bits (94), Expect = 0.008 Identities = 87/373 (23%), Positives = 132/373 (35%), Gaps = 77/373 (20%) Query: 202 GPLPLEALDLSSPQELHQASSPDNQVLPAQSLAKGK----GRTYGSKYPGLIKVEQARCG 257 GP +P AS + PA++ + G GR G+ PG + G Sbjct: 78 GPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL-------G 130 Query: 258 EVAFRMDEVVSQDFEGDYVALLGFSQESRGESPSREAGTSSGCTSGALEEIAG-TKETPL 316 + R+ ++E+ + EA S ++GA + +G T TP Sbjct: 131 QKGLRIS-----------------AEETVARGKATEAPKRSALSAGARRDTSGPTPGTP- 172 Query: 317 FQKILPLSEANEGPSLGNRACTKPE-SSEERPYNLGFRRKVNLKAPTHNSERPPQGSYMN 375 + G +G +P S+ RP G R+ V+ A H++ P + Sbjct: 173 -SPAMARRSRAAGTEVG---LPRPAPSARPRPPTEGPRKSVS-SASEHSTTEPSPAARRR 227 Query: 376 VLEDALDCASGLRAGVSQEPAASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAAS 435 GL+ S+ ++S PL +P R GP +PR +PA P+ Sbjct: 228 P-----SAGGGLQRPASRSLSSSAT--PLSSPA-----RSGPSARGTPR-APAHPSQPKP 274 Query: 436 ETKIEVK----TKERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSV--TPEKA 489 + ++ T R P P S ++P P L+ Q P++ TP + Sbjct: 275 KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAA------LQSQAPPTLPATPHSS 328 Query: 490 SLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSP 549 SL C L +P P S + QT S PAT PS T S GSP Sbjct: 329 SLT--------CQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAT--------TSLGSP 372 Query: 550 ERGPTLEEEPPGP 562 T P P Sbjct: 373 TLQATHSFLPSPP 385 Score = 35.4 bits (80), Expect = 0.33 Identities = 49/184 (26%), Positives = 67/184 (36%), Gaps = 29/184 (15%) Query: 386 GLRAGVSQEPAASKMQGPLGNPENMVQLRPGP-RQASSPRLSPAS--PAAAASETKIEVK 442 G V ++P A + G G R GP R A + +PAS PA+ E K Sbjct: 48 GAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAK 107 Query: 443 TKERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCS 502 P P+ P R + + P G K LR + +V KA+ Sbjct: 108 NTS-----PGPVSSPGRASGTTRPGPLGQKG--LRISAEETVARGKAT------------ 148 Query: 503 LYSPKPNRAKSLGKAGTTQTKTSGPATA-PSPLTEEKAALPEASAGSPERGPTLEEEPPG 561 +PK +S AG + TSGP PSP ++ G P P+ PP Sbjct: 149 -EAPK----RSALSAGARRD-TSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPT 202 Query: 562 PEPR 565 PR Sbjct: 203 EGPR 206 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 44.7 bits (104), Expect = 5e-04 Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 15/168 (8%) Query: 389 AGVSQEPAASKM---QGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKTKE 445 AG S PA+ + P P RP SSP + P++ + + K K Sbjct: 292 AGRSPSPASGRRGEGDAPFSEPGTTSTQRP-----SSPETATKQPSSPYEDKDKDKKEKS 346 Query: 446 RNGRLPKPMPCPSRNTSSPEPPTP-GLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLY 504 +P P P R+++ PEPP P L G QP T + N P + + Sbjct: 347 AT----RPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRD 402 Query: 505 SPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERG 552 P + L ++ +++ +S P+ P+ ++ ++ PE+ +P G Sbjct: 403 RSPPKSPEKLPQSSSSE--SSPPSPQPTKVSRHASSSPESPKPAPAPG 448 Score = 40.8 bits (94), Expect = 0.008 Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 35/197 (17%) Query: 391 VSQEPAASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETK------------ 438 V + PA++ Q P + L+P + SS S +S ++++S + Sbjct: 2506 VGEPPASTGAQ----QPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSS 2561 Query: 439 ------IEVKTKERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQ 492 + V+ + R+P P P P PP P P+ ++S Sbjct: 2562 DSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEP-----------TPAKRKRRSSSS 2610 Query: 493 HNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERG 552 + S S + + S + ++ + +S +++PSP ALP+ + SP++ Sbjct: 2611 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPA--SPKKP 2668 Query: 553 PTLEEEPPGPEPRIGAL 569 P E P I +L Sbjct: 2669 PPGERRSRSPRKPIDSL 2685 Score = 34.3 bits (77), Expect = 0.73 Identities = 45/186 (24%), Positives = 70/186 (37%), Gaps = 22/186 (11%) Query: 398 SKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPMP-- 455 SK + L ++ P P+Q S + P + +S+ K + +T R R P Sbjct: 767 SKAKSRLSLRRSLSGSSPCPKQKS--QTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPK 824 Query: 456 ----CPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPKPN-- 509 PSR + S P P +K RQ S+T +A+ Q P + C SP P Sbjct: 825 QKSKTPSRQSHSSSSPHPKVKSG--TPPRQGSITSPQANEQSVTPQRRSCFESSPDPELK 882 Query: 510 ----RAKSLGKAGTTQTKTS-----GPATAPSPLTEEKAAL-PEASAGSPERGPTLEEEP 559 S + + K+S P+ + SP + KA + P + S P+ Sbjct: 883 SRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVT 942 Query: 560 PGPEPR 565 PR Sbjct: 943 SRTTPR 948 Score = 33.1 bits (74), Expect = 1.6 Identities = 45/200 (22%), Positives = 69/200 (34%), Gaps = 28/200 (14%) Query: 385 SGLRAGVSQEPAASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKTK 444 SG V +P A+ + G+ + P PR S +S + T+ Sbjct: 1598 SGSSPEVKDKPRAAP-RAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTE 1656 Query: 445 ERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLY 504 PK + SSPEP T R R KA L Sbjct: 1657 SSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLS------------ 1704 Query: 505 SPKPNRAKSLGKAGTTQTKT------SGPATAPSPLTEEKAALPEASAGSPERGPTLEE- 557 R++S + T+++T S ++P P + +++ SA SP T Sbjct: 1705 ----RRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRG 1760 Query: 558 EPPGPEPRIGALGVKVFRSR 577 P P+PR G++ RSR Sbjct: 1761 RSPSPKPR----GLQRSRSR 1776 Score = 31.2 bits (69), Expect = 6.2 Identities = 86/415 (20%), Positives = 148/415 (35%), Gaps = 56/415 (13%) Query: 182 TSPEFVDDRPQVVNALCQAWGPLPLEALDLSSPQELHQAS--SPDNQVLPAQSLAKGKGR 239 +SPE V++RP V L Q+ LEA+++ S SP+++ L L + Sbjct: 1270 SSPE-VEERPAVSLTLDQSQSQASLEAVEVPSMASSWGGPHFSPEHKELSNSPLREN--- 1325 Query: 240 TYGSKYPGLIKVEQARCGEVAFRMD----EVVSQDFEGDYVALLGF--SQESRGESPSRE 293 ++GS +E G + M+ V +D G ++ L S + + +S Sbjct: 1326 SFGSP------LEFRNSGPLGTEMNTGFSSEVKEDLNGPFLNQLETDPSLDMKEQSTRSS 1379 Query: 294 AGTSSGCTSGALEEIAGTKETPLFQKIL---PLSEANEGPSLGNRACTKPESSEERPYNL 350 +SS + A+E+ + + +L P + + E S + + PE + P Sbjct: 1380 GHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSS----SASSPEMKDGLPRTP 1435 Query: 351 GFRRKVNLKAPTHNSERPPQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLG-NPEN 409 R + + P +L +S + + P+ + + P+ Sbjct: 1436 SRRSRSGSSPGLRDGSGTPS-------RHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKA 1488 Query: 410 MVQL-RPGPRQASSPRLS----PASPAAAASETKIEVKT--------KERNGRLP----K 452 + Q RP R SSP L+ + SE+ ++ KT + R+G K Sbjct: 1489 LPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVK 1548 Query: 453 PMPCPSRNTSSPEPPTPGLKFSF-LRGQRQPSVTPEKASLQHNGPWKVLCSLYSP----K 507 P P + S P K LR + + +PE S P + S SP K Sbjct: 1549 PSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSR-SGSSPEVKDK 1607 Query: 508 PNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERGPTLEEEPPGP 562 P A + + PA P + + SPE + E P P Sbjct: 1608 PRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHP 1662 Score = 30.8 bits (68), Expect = 8.1 Identities = 42/175 (24%), Positives = 62/175 (35%), Gaps = 27/175 (15%) Query: 414 RPGPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPPTPGLKF 473 R PR SP +S PA + ++ + R+ P+ SR SP P GL+ Sbjct: 1719 RTPPRHRRSPSVSSPEPAEKSRSSR-----RRRSASSPRTKTT-SRRGRSPSPKPRGLQR 1772 Query: 474 SFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSP 533 S R +R+ + T + S S R +S ++ T+ + G S Sbjct: 1773 SRSRSRREKTRTTRRRDRSG--------SSQSTSRRRQRSRSRSRVTRRRRGG-----SG 1819 Query: 534 LTEEKAALPEASAGSPERGPTLEEEPPGPEPRIGALGVKVFRSRIACLPGGRDRA 588 A E+S S R PP R RSR + P R R+ Sbjct: 1820 YHSRSPARQESSRTSSRRRRGRSRTPPTSRKR--------SRSRTSPAPWKRSRS 1866 >gi|19924099 synapsin I isoform Ia [Homo sapiens] Length = 705 Score = 44.3 bits (103), Expect = 7e-04 Identities = 57/208 (27%), Positives = 76/208 (36%), Gaps = 32/208 (15%) Query: 392 SQEPA---ASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKT-KERN 447 SQ+PA A + P G P Q PGP++ P P + + Sbjct: 449 SQQPAGPPAQQRPPPQGGPP---QPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLP 505 Query: 448 GRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPK 507 RLP P P + S PPT G +G++ V + P SP Sbjct: 506 QRLPSPTSAPQQPASQAAPPTQG------QGRQSRPVAGGPGAPPAARP------PASPS 553 Query: 508 PNRAKSLGKAGTTQTKTSGP----ATAPSPLTEEKAALPEASAGSPERGPTLEEEPPGPE 563 P R +A T QT SGP A+ P +++ P+ G GPT + GP Sbjct: 554 PQRQAGPPQA-TRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPG--PAGPTRQASQAGPV 610 Query: 564 PRIGALGVKVFRSRIACLPGGRDRAGRP 591 PR G + R P G AGRP Sbjct: 611 PRTGPPTTQQPR------PSGPGPAGRP 632 >gi|19924097 synapsin I isoform Ib [Homo sapiens] Length = 669 Score = 44.3 bits (103), Expect = 7e-04 Identities = 57/208 (27%), Positives = 76/208 (36%), Gaps = 32/208 (15%) Query: 392 SQEPA---ASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKT-KERN 447 SQ+PA A + P G P Q PGP++ P P + + Sbjct: 449 SQQPAGPPAQQRPPPQGGPP---QPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLP 505 Query: 448 GRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPK 507 RLP P P + S PPT G +G++ V + P SP Sbjct: 506 QRLPSPTSAPQQPASQAAPPTQG------QGRQSRPVAGGPGAPPAARP------PASPS 553 Query: 508 PNRAKSLGKAGTTQTKTSGP----ATAPSPLTEEKAALPEASAGSPERGPTLEEEPPGPE 563 P R +A T QT SGP A+ P +++ P+ G GPT + GP Sbjct: 554 PQRQAGPPQA-TRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPG--PAGPTRQASQAGPV 610 Query: 564 PRIGALGVKVFRSRIACLPGGRDRAGRP 591 PR G + R P G AGRP Sbjct: 611 PRTGPPTTQQPR------PSGPGPAGRP 632 >gi|55741655 anoctamin 8 [Homo sapiens] Length = 1232 Score = 43.5 bits (101), Expect = 0.001 Identities = 62/251 (24%), Positives = 88/251 (35%), Gaps = 38/251 (15%) Query: 323 LSEANEGPSLGNRACTKPESSEER-PYNLGFR--RKVNLKAPTHNSERPPQGSYMNVLED 379 L+ A G + P S+ R P L F+ + + + S PP+ + L Sbjct: 997 LAAAGAGATTRPPPAQSPTGSDTRLPAFLSFKFLKSPETRRDSERSHSPPKAFHAGKLFP 1056 Query: 380 ALDCASGLRAGVSQEPAASKMQGPLGNPENMVQLRP-GPRQASSPRLSPASPA--AAASE 436 G EP ++ G Q RP G + S R+ + P A A E Sbjct: 1057 F--------GGTRAEPGSNGAGG---------QARPDGTPSSGSSRVQRSGPVDEALAEE 1099 Query: 437 TKIEVKTKERNGRLPKPMPCPS---RNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQH 493 + +E +G P+ P+ R + SP PP P + R P TP Q Sbjct: 1100 LEAPRPEEEGSGTALAPVGAPALRTRRSRSPAPPPP------MPLPRPP--TPPAGCWQW 1151 Query: 494 NGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERGP 553 +GPW C P +A L A +GP AP PL + + P Sbjct: 1152 DGPWG--CGGEGAAPRQA--LAAAECPPCAMAGPPPAPQPLPGDASFYSLPPPPLPPTSD 1207 Query: 554 TLEEEPPGPEP 564 LE P P P Sbjct: 1208 PLETPAPSPSP 1218 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.132 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,543,183 Number of Sequences: 37866 Number of extensions: 3067490 Number of successful extensions: 15276 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 498 Number of HSP's that attempted gapping in prelim test: 13706 Number of HSP's gapped (non-prelim): 1931 length of query: 1200 length of database: 18,247,518 effective HSP length: 114 effective length of query: 1086 effective length of database: 13,930,794 effective search space: 15128842284 effective search space used: 15128842284 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.