Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PLEKHG4B Sequence: fasta or formatted (1271aa) NCBI GI: 148529025
Description:

pleckstrin homology domain containing, family G (with RhoGef domain) member 4B

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2        104           3
 C cysteine            2.8         35           2
 D aspartate           5.0         64           1
 E glutamate           7.5         95           2
 F phenylalanine       2.5         32           2
 G glycine             7.0         89           3
 H histidine           3.5         44           2
 I isoleucine          2.6         33           2
 K lysine              3.6         46           2
 L leucine            10.7        136           3
 M methionine          1.7         21           2
 N asparagine          1.6         20           2
 P proline             6.8         86           2
 Q glutamine           5.7         73           2
 R arginine            7.7         98           4
 S serine             10.4        132           5
 T threonine           4.7         60           2
 V valine              5.7         72           3
 W tryptophan          1.3         16           1
 Y tyrosine            1.2         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology domain containing, family G (wi... 
PLEKHG4               0.158   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.158   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.158   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.158   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.158   pleckstrin homology domain containing, family G (wit...
FLJ10357              0.139   hypothetical protein LOC55701 
TRIO                  0.070   triple functional domain (PTPRF interacting) 
KALRN                 0.068   kalirin, RhoGEF kinase isoform 1 
KALRN                 0.068   kalirin, RhoGEF kinase isoform 2 
GEFT                  0.068   RhoA/RAC/CDC42 exchange factor isoform 1 
GEFT                  0.068   RhoA/RAC/CDC42 exchange factor isoform 3 
MCF2L                 0.067   MCF.2 cell line derived transforming sequence-like ...
MCF2L                 0.067   MCF.2 cell line derived transforming sequence-like ...
MCF2                  0.062   MCF.2 cell line derived transforming sequence isofo...
MCF2                  0.062   MCF.2 cell line derived transforming sequence isofo...
KALRN                 0.061   kalirin, RhoGEF kinase isoform 3 
KIAA1755              0.061   hypothetical protein LOC85449 
MCF2L2                0.037   Rho family guanine-nucleotide exchange factor 
PLEKHG1               0.030   pleckstrin homology domain containing, family G (wit...
PLEKHG2               0.023   common-site lymphoma/leukemia guanine nucleotide ex...
OBSCN                 0.021   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.021   obscurin, cytoskeletal calmodulin and titin-interac...
PLEKHG3               0.018   pleckstrin homology domain containing, family G, mem...
SPATA13               0.018   spermatogenesis associated 13 
DNMBP                 0.017   dynamin binding protein 
ARHGEF4               0.017   Rho guanine nucleotide exchange factor 4 isoform a [...
PREX1                 0.016   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
PREX2                 0.015   DEP domain containing 2 isoform b 
PREX2                 0.015   DEP domain containing 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press