Search of human proteins with 71143137

Search of human proteins with 71143137

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|71143137 high-mobility group box 3 [Homo sapiens]
         (200 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|71143137 high-mobility group box 3 [Homo sapiens]                  415   e-116
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...   365   e-101
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...   365   e-101
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...   361   e-100
gi|169212060 PREDICTED: high mobility group protein B3-like prot...   351   2e-97
gi|239745831 PREDICTED: high mobility group protein B3-like prot...   351   2e-97
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]          341   3e-94
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]          341   3e-94
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...   341   3e-94
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...   337   3e-93
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...   337   3e-93
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...   337   3e-93
gi|4504425 high-mobility group box 1 [Homo sapiens]                   311   3e-85
gi|194688135 high-mobility group box 2 [Homo sapiens]                 308   3e-84
gi|194688133 high-mobility group box 2 [Homo sapiens]                 308   3e-84
gi|11321591 high-mobility group box 2 [Homo sapiens]                  308   3e-84
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]           294   4e-80
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...   273   7e-74
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]            231   2e-61
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]          224   5e-59
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]          224   5e-59
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]          223   1e-58
gi|57232750 HMG2 like isoform 1 [Homo sapiens]                        144   7e-35
gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]          129   2e-30
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]          129   2e-30
gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]          113   9e-26
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     85   4e-17
gi|169165476 PREDICTED: similar to high-mobility group box 2 [Ho...    82   2e-16
gi|239748075 PREDICTED: similar to high-mobility group box 2 [Ho...    82   2e-16
gi|239741972 PREDICTED: similar to high-mobility group box 2 [Ho...    82   2e-16

>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score =  415 bits (1066), Expect = e-116
 Identities = 200/200 (100%), Positives = 200/200 (100%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
           DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI
Sbjct: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV
Sbjct: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180

Query: 181 EEEDEEEEEEEEEEEEEEDE 200
           EEEDEEEEEEEEEEEEEEDE
Sbjct: 181 EEEDEEEEEEEEEEEEEEDE 200


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  365 bits (936), Expect = e-101
 Identities = 179/200 (89%), Positives = 187/200 (93%), Gaps = 1/200 (0%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MAKGDPKKP+GKMSAYAF VQTC +EHKKKNPEVPVNFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
            EMAKAD+V YDREMKDYGPAKGGKKK DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GDVAKKLGEMWNNLNDSEKQPY+TKAAKLKEKYEKDV D K KGKF GAK PAKVARKKV
Sbjct: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179

Query: 181 EEEDEEEEEEEEEEEEEEDE 200
           EEEDEE+EEEEE+E++EEDE
Sbjct: 180 EEEDEEDEEEEEKEKDEEDE 199


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  365 bits (936), Expect = e-101
 Identities = 179/200 (89%), Positives = 187/200 (93%), Gaps = 1/200 (0%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MAKGDPKKP+GKMSAYAF VQTC +EHKKKNPEVPVNFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
            EMAKAD+V YDREMKDYGPAKGGKKK DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GDVAKKLGEMWNNLNDSEKQPY+TKAAKLKEKYEKDV D K KGKF GAK PAKVARKKV
Sbjct: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179

Query: 181 EEEDEEEEEEEEEEEEEEDE 200
           EEEDEE+EEEEE+E++EEDE
Sbjct: 180 EEEDEEDEEEEEKEKDEEDE 199


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  361 bits (926), Expect = e-100
 Identities = 178/200 (89%), Positives = 186/200 (93%), Gaps = 1/200 (0%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MAKGDPKKP+GKMSAYAF VQTC +EHKKKNPEV VNFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
            EMAKAD+V YDREMKDYGPAKGGKKK DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GDVAKKLGEMWNNLNDSEKQPY+TKAAKLKEKYEKDV D K KGKF GAK PAKVARKKV
Sbjct: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179

Query: 181 EEEDEEEEEEEEEEEEEEDE 200
           EEEDEE+EEEEE+E++EEDE
Sbjct: 180 EEEDEEDEEEEEKEKDEEDE 199


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  351 bits (901), Expect = 2e-97
 Identities = 170/188 (90%), Positives = 179/188 (95%), Gaps = 1/188 (0%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNP+VP+NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
           +E+AKADKV YD+E+KDYGPAKGGKKK DPNAPKRPPSGFFLFCSEF PK KSTNPGI I
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPI 119

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GDVAKKLGEMW NLNDSEKQPYIT+AAKLKEKYEKDVA YKSKGK DGAKGPAKVA+KKV
Sbjct: 120 GDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKV 179

Query: 181 EEEDEEEE 188
           EEEDE+EE
Sbjct: 180 EEEDEDEE 187


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  351 bits (901), Expect = 2e-97
 Identities = 170/188 (90%), Positives = 179/188 (95%), Gaps = 1/188 (0%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNP+VP+NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
           +E+AKADKV YD+E+KDYGPAKGGKKK DPNAPKRPPSGFFLFCSEF PK KSTNPGI I
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPI 119

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GDVAKKLGEMW NLNDSEKQPYIT+AAKLKEKYEKDVA YKSKGK DGAKGPAKVA+KKV
Sbjct: 120 GDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKV 179

Query: 181 EEEDEEEE 188
           EEEDE+EE
Sbjct: 180 EEEDEDEE 187


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  341 bits (874), Expect = 3e-94
 Identities = 166/200 (83%), Positives = 181/200 (90%), Gaps = 1/200 (0%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MA+GD KKPKGKMSAYAFF QTCREEHKKKNPEVPVNF EFSKKCSE+ KTMSGKEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
           DEMAK DKV YD+EMKD GP +GGKKK DPNA KRP SGFFLFCSEF PKIKSTNPGISI
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKK-DPNALKRPLSGFFLFCSEFHPKIKSTNPGISI 119

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GD+AKKLGEMW N +D EKQPYITKAA LKEKYEKDVADYKSKGKFD AKGP K+A KKV
Sbjct: 120 GDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKV 179

Query: 181 EEEDEEEEEEEEEEEEEEDE 200
           +E+D+E+EEEEEEEEE+++E
Sbjct: 180 KEKDKEDEEEEEEEEEKKEE 199


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  341 bits (874), Expect = 3e-94
 Identities = 166/200 (83%), Positives = 181/200 (90%), Gaps = 1/200 (0%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MA+GD KKPKGKMSAYAFF QTCREEHKKKNPEVPVNF EFSKKCSE+ KTMSGKEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
           DEMAK DKV YD+EMKD GP +GGKKK DPNA KRP SGFFLFCSEF PKIKSTNPGISI
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKK-DPNALKRPLSGFFLFCSEFHPKIKSTNPGISI 119

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GD+AKKLGEMW N +D EKQPYITKAA LKEKYEKDVADYKSKGKFD AKGP K+A KKV
Sbjct: 120 GDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKV 179

Query: 181 EEEDEEEEEEEEEEEEEEDE 200
           +E+D+E+EEEEEEEEE+++E
Sbjct: 180 KEKDKEDEEEEEEEEEKKEE 199


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
           sapiens]
          Length = 201

 Score =  341 bits (874), Expect = 3e-94
 Identities = 166/200 (83%), Positives = 181/200 (90%), Gaps = 1/200 (0%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MA+GD KKPKGKMSAYAFF QTCREEHKKKNPEVPVNF EFSKKCSE+ KTMSGKEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
           DEMAK DKV YD+EMKD GP +GGKKK DPNA KRP SGFFLFCSEF PKIKSTNPGISI
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKK-DPNALKRPLSGFFLFCSEFHPKIKSTNPGISI 119

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GD+AKKLGEMW N +D EKQPYITKAA LKEKYEKDVADYKSKGKFD AKGP K+A KKV
Sbjct: 120 GDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKV 179

Query: 181 EEEDEEEEEEEEEEEEEEDE 200
           +E+D+E+EEEEEEEEE+++E
Sbjct: 180 KEKDKEDEEEEEEEEEKKEE 199


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  337 bits (865), Expect = 3e-93
 Identities = 170/189 (89%), Positives = 173/189 (91%), Gaps = 5/189 (2%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MAKGDPKKPKGKMSAY FFVQTCREE KKKNP   VNFAEFSKKCSERWKTMSGKEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
           DEMAK DKV  DREMK  GPAKGGKKKKDP+APKRPPSGFFLF SE RPKIKSTNPGISI
Sbjct: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GDVAKKLGEMWNNLNDSEKQPYITK AKLKEKYEKDVAD KSKGKFDG+K PAKVA KKV
Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175

Query: 181 EEEDEEEEE 189
           EEEDE+EEE
Sbjct: 176 EEEDEDEEE 184


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  337 bits (865), Expect = 3e-93
 Identities = 170/189 (89%), Positives = 173/189 (91%), Gaps = 5/189 (2%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MAKGDPKKPKGKMSAY FFVQTCREE KKKNP   VNFAEFSKKCSERWKTMSGKEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
           DEMAK DKV  DREMK  GPAKGGKKKKDP+APKRPPSGFFLF SE RPKIKSTNPGISI
Sbjct: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GDVAKKLGEMWNNLNDSEKQPYITK AKLKEKYEKDVAD KSKGKFDG+K PAKVA KKV
Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175

Query: 181 EEEDEEEEE 189
           EEEDE+EEE
Sbjct: 176 EEEDEDEEE 184


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score =  337 bits (865), Expect = 3e-93
 Identities = 170/189 (89%), Positives = 173/189 (91%), Gaps = 5/189 (2%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           MAKGDPKKPKGKMSAY FFVQTCREE KKKNP   VNFAEFSKKCSERWKTMSGKEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
           DEMAK DKV  DREMK  GPAKGGKKKKDP+APKRPPSGFFLF SE RPKIKSTNPGISI
Sbjct: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180
           GDVAKKLGEMWNNLNDSEKQPYITK AKLKEKYEKDVAD KSKGKFDG+K PAKVA KKV
Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175

Query: 181 EEEDEEEEE 189
           EEEDE+EEE
Sbjct: 176 EEEDEDEEE 184


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score =  311 bits (796), Expect = 3e-85
 Identities = 152/206 (73%), Positives = 171/206 (83%), Gaps = 6/206 (2%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           M KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+  VNF+EFSKKCSERWKTMS KEK KF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 118
           ++MAKADK RY+REMK Y P KG  KKK  DPNAPKRPPS FFLFCSE+RPKIK  +PG+
Sbjct: 61  EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 120

Query: 119 SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAK----GPAK 174
           SIGDVAKKLGEMWNN    +KQPY  KAAKLKEKYEKD+A Y++KGK D AK       K
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 180

Query: 175 VARKKVEEEDEEEEEEEEEEEEEEDE 200
             +KK EEEDEE+EE+EEEEE+EEDE
Sbjct: 181 SKKKKEEEEDEEDEEDEEEEEDEEDE 206


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  308 bits (788), Expect = 3e-84
 Identities = 150/205 (73%), Positives = 174/205 (84%), Gaps = 5/205 (2%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           M KGDP KP+GKMS+YAFFVQTCREEHKKK+P+  VNFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGK--KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 118
           ++MAK+DK RYDREMK+Y P KG K  KKKDPNAPKRPPS FFLFCSE RPKIKS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 119 SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFD-GAKGPAKV-- 175
           SIGD AKKLGEMW+  +  +KQPY  KAAKLKEKYEKD+A Y++KGK + G KGP +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 176 ARKKVEEEDEEEEEEEEEEEEEEDE 200
           ++KK E EDEEEEEEEE+E+EEE++
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEED 205


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  308 bits (788), Expect = 3e-84
 Identities = 150/205 (73%), Positives = 174/205 (84%), Gaps = 5/205 (2%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           M KGDP KP+GKMS+YAFFVQTCREEHKKK+P+  VNFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGK--KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 118
           ++MAK+DK RYDREMK+Y P KG K  KKKDPNAPKRPPS FFLFCSE RPKIKS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 119 SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFD-GAKGPAKV-- 175
           SIGD AKKLGEMW+  +  +KQPY  KAAKLKEKYEKD+A Y++KGK + G KGP +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 176 ARKKVEEEDEEEEEEEEEEEEEEDE 200
           ++KK E EDEEEEEEEE+E+EEE++
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEED 205


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  308 bits (788), Expect = 3e-84
 Identities = 150/205 (73%), Positives = 174/205 (84%), Gaps = 5/205 (2%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           M KGDP KP+GKMS+YAFFVQTCREEHKKK+P+  VNFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGK--KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 118
           ++MAK+DK RYDREMK+Y P KG K  KKKDPNAPKRPPS FFLFCSE RPKIKS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 119 SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFD-GAKGPAKV-- 175
           SIGD AKKLGEMW+  +  +KQPY  KAAKLKEKYEKD+A Y++KGK + G KGP +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 176 ARKKVEEEDEEEEEEEEEEEEEEDE 200
           ++KK E EDEEEEEEEE+E+EEE++
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEED 205


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score =  294 bits (752), Expect = 4e-80
 Identities = 143/205 (69%), Positives = 168/205 (81%), Gaps = 5/205 (2%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           M KGDPKKP+GKMS+YAFFVQTCREEHKKK+ +  VNF+EFS KCSERWKTMS KEK KF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 118
           ++MAKADK  Y+R+MK Y P KG  KKK  DPNAPKRPPS FFLFCSE+ PKIK  +PG+
Sbjct: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120

Query: 119 SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKG---PAKV 175
           SIGDVAKKLGEMWNN    +KQP   KAAKLKEKYEKD+A Y++KGK + AK     A+ 
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180

Query: 176 ARKKVEEEDEEEEEEEEEEEEEEDE 200
           ++KK EEE++EE+EE+EEEE+EEDE
Sbjct: 181 SKKKKEEEEDEEDEEDEEEEDEEDE 205


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score =  273 bits (698), Expect = 7e-74
 Identities = 136/150 (90%), Positives = 139/150 (92%), Gaps = 2/150 (1%)

Query: 40  EFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSG 99
           EFSKKCSERWKTMSGKEKSKFDEMAK DKV  DREMK  GPAKGGKKKKDP+APKRPPSG
Sbjct: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76

Query: 100 FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVAD 159
           FFLF SE RPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITK AKLKEKYEKDVAD
Sbjct: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136

Query: 160 YKSKGKFDGAKGPAKVARKKVEEEDEEEEE 189
            KSKGKFDG+K PAKVA KKVEEEDE+EEE
Sbjct: 137 SKSKGKFDGSKRPAKVAWKKVEEEDEDEEE 166



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)

Query: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62
           K DP  PK   S +  F    R + K  NP + +   + +KK  E W  ++  EK  +  
Sbjct: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYIT 121

Query: 63  MAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRP 96
                K +Y++++ D       K K   +  KRP
Sbjct: 122 KTAKLKEKYEKDVAD------SKSKGKFDGSKRP 149


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score =  231 bits (590), Expect = 2e-61
 Identities = 114/181 (62%), Positives = 140/181 (77%), Gaps = 5/181 (2%)

Query: 25  EEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGG 84
           EEHKKKNP+  V F+EF KKCSE WKT+  KEK KF++MAKADK  Y+REMK Y P KG 
Sbjct: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758

Query: 85  KKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 142
           KKKK  DPNAPKRPP  FFLFCSE+RPKIK  +PG+SI DV KKL  MWNN   ++KQ Y
Sbjct: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818

Query: 143 ITKAAKLKEKYEKDVADYKSKGKFDGAKG---PAKVARKKVEEEDEEEEEEEEEEEEEED 199
             KAAKLKEKY+KD+A Y++KGK + AK     A+ ++KK EEE++EE+E+EEE EE++D
Sbjct: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDD 878

Query: 200 E 200
           +
Sbjct: 879 K 879



 Score = 33.9 bits (76), Expect = 0.095
 Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 8/91 (8%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64
           DP  PK    A+  F    R + K ++P + ++  +  KK +  W   +  +K  +++ A
Sbjct: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822

Query: 65  KADKVRYDREMKDYGPAKGGKKKKDPNAPKR 95
              K +Y +++  Y      + K  PN+ K+
Sbjct: 823 AKLKEKYKKDIAAY------RAKGKPNSAKK 847


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score =  224 bits (570), Expect = 5e-59
 Identities = 115/180 (63%), Positives = 133/180 (73%), Gaps = 13/180 (7%)

Query: 34  VPVNFAEFSKKCSERWKTMSGKEKSKF-------DEMAKADKVRYDREMKDYGPAKGGKK 86
           V VNF+EFSKKCSERWK MS KEK KF       ++MAKADK  Y REMK Y P KG  K
Sbjct: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222

Query: 87  KK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYIT 144
           KK  DPNAPKRPPS FFL+ SE+ PKIK   PG+S GDVAKKLGEMWNN    +KQPY  
Sbjct: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282

Query: 145 KAAKLKEKYEKDVADYKSKGKFDGAKG----PAKVARKKVEEEDEEEEEEEEEEEEEEDE 200
           ++AKLKEKYEKD+A Y++KGK D A       AK  +KK EEE+EE+EE+EEEE++EEDE
Sbjct: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDE 342



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 74/196 (37%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64
           DP  PK   SA  FF+       K K     ++F + +KK  E W   +  +K  +++ +
Sbjct: 227 DPNAPKRPPSA--FFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVA 124
              K +Y++++  Y  AKG                          K  + N G       
Sbjct: 285 AKLKEKYEKDIAAY-RAKG--------------------------KHDAANNG------- 310

Query: 125 KKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEED 184
                             + KAAK K+K E++                      + +EED
Sbjct: 311 ------------------VVKAAKSKKKKEEE--------------------ENEEDEED 332

Query: 185 EEEEEEEEEEEEEEDE 200
           EEEE++EE+E+EE+DE
Sbjct: 333 EEEEKDEEDEDEEDDE 348



 Score = 30.8 bits (68), Expect = 0.80
 Identities = 17/73 (23%), Positives = 28/73 (38%)

Query: 93  PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEK 152
           P RP        S            ++  + +KK  E W N++  EK  +     K ++ 
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199

Query: 153 YEKDVADYKSKGK 165
            + D A YK + K
Sbjct: 200 AKADKAHYKREMK 212


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score =  224 bits (570), Expect = 5e-59
 Identities = 115/180 (63%), Positives = 133/180 (73%), Gaps = 13/180 (7%)

Query: 34  VPVNFAEFSKKCSERWKTMSGKEKSKF-------DEMAKADKVRYDREMKDYGPAKGGKK 86
           V VNF+EFSKKCSERWK MS KEK KF       ++MAKADK  Y REMK Y P KG  K
Sbjct: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222

Query: 87  KK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYIT 144
           KK  DPNAPKRPPS FFL+ SE+ PKIK   PG+S GDVAKKLGEMWNN    +KQPY  
Sbjct: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282

Query: 145 KAAKLKEKYEKDVADYKSKGKFDGAKG----PAKVARKKVEEEDEEEEEEEEEEEEEEDE 200
           ++AKLKEKYEKD+A Y++KGK D A       AK  +KK EEE+EE+EE+EEEE++EEDE
Sbjct: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDE 342



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 74/196 (37%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64
           DP  PK   SA  FF+       K K     ++F + +KK  E W   +  +K  +++ +
Sbjct: 227 DPNAPKRPPSA--FFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVA 124
              K +Y++++  Y  AKG                          K  + N G       
Sbjct: 285 AKLKEKYEKDIAAY-RAKG--------------------------KHDAANNG------- 310

Query: 125 KKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEED 184
                             + KAAK K+K E++                      + +EED
Sbjct: 311 ------------------VVKAAKSKKKKEEE--------------------ENEEDEED 332

Query: 185 EEEEEEEEEEEEEEDE 200
           EEEE++EE+E+EE+DE
Sbjct: 333 EEEEKDEEDEDEEDDE 348



 Score = 30.8 bits (68), Expect = 0.80
 Identities = 17/73 (23%), Positives = 28/73 (38%)

Query: 93  PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEK 152
           P RP        S            ++  + +KK  E W N++  EK  +     K ++ 
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199

Query: 153 YEKDVADYKSKGK 165
            + D A YK + K
Sbjct: 200 AKADKAHYKREMK 212


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score =  223 bits (567), Expect = 1e-58
 Identities = 113/177 (63%), Positives = 132/177 (74%), Gaps = 10/177 (5%)

Query: 34  VPVNFAEFSKKCSERWKTMSGKEKSKF-------DEMAKADKVRYDREMKDYGPAKGGKK 86
           V VNF+EFSKKCSERWK MS KEK KF       ++MAKADK  Y REMK Y P KG  K
Sbjct: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222

Query: 87  KK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYIT 144
           KK  DPNAPKRPPS FFL+ SE+ PKIK   PG+S GDVAKKLGEMWNN    +KQPY  
Sbjct: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282

Query: 145 KAAKLKEKYEKDVADYKSKGKFDGA-KGPAKVARKKVEEEDEEEEEEEEEEEEEEDE 200
           ++AKLKEKYEKD+A Y++KGK D A  G  K A+ K ++E+EE EE+EE+EEEE+DE
Sbjct: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDE 339



 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 44/196 (22%), Positives = 75/196 (38%), Gaps = 73/196 (37%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64
           DP  PK   SA  FF+       K K     ++F + +KK  E W   +  +K  +++ +
Sbjct: 227 DPNAPKRPPSA--FFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVA 124
              K +Y++++  Y  AKG                          K  + N G       
Sbjct: 285 AKLKEKYEKDIAAY-RAKG--------------------------KHDAANNG------- 310

Query: 125 KKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEED 184
                             + KAAK K+K E++                     ++ EE++
Sbjct: 311 ------------------VVKAAKSKKKKEEE-------------------ENEEDEEDE 333

Query: 185 EEEEEEEEEEEEEEDE 200
           EEE++E+E+EE++EDE
Sbjct: 334 EEEKDEDEDEEDDEDE 349



 Score = 30.8 bits (68), Expect = 0.80
 Identities = 17/73 (23%), Positives = 28/73 (38%)

Query: 93  PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEK 152
           P RP        S            ++  + +KK  E W N++  EK  +     K ++ 
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199

Query: 153 YEKDVADYKSKGK 165
            + D A YK + K
Sbjct: 200 AKADKAHYKREMK 212


>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
          Length = 186

 Score =  144 bits (362), Expect = 7e-35
 Identities = 66/163 (40%), Positives = 100/163 (61%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
           M K    KPK  +S+Y  F+   R + K++ P   V F EFS+KCSE+W+++S  EK+K+
Sbjct: 1   MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60

Query: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
           + +AK DK RY  EM +Y   +  ++K+DP  P+RPPS F LFC +   ++K  NP  S+
Sbjct: 61  EALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV 120

Query: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSK 163
             VAK  G+MW+   D EK PY  + A L+ KY +++  Y+ +
Sbjct: 121 VQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQ 163



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 93  PKRPPSGFFLFCSEFRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYITKAAKLK 150
           PK   S +  F   +R K K   P   +G  + ++K  E W +++  EK  Y   A   K
Sbjct: 9   PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68

Query: 151 EKYEKDVADYKSKGKFDGAKGPAKVAR 177
            +Y++++ +Y  K K    + P +  R
Sbjct: 69  ARYQEEMMNYVGKRKKRRKRDPQEPRR 95



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 2/93 (2%)

Query: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62
           K DP++P+   S++  F Q    + K++NP   V   + +K   + W T +  EK  +++
Sbjct: 87  KRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV--VQVAKATGKMWSTATDLEKHPYEQ 144

Query: 63  MAKADKVRYDREMKDYGPAKGGKKKKDPNAPKR 95
                + +Y  E++ Y      +KK   +A  R
Sbjct: 145 RVALLRAKYFEELELYRKQCNARKKYRMSARNR 177


>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  129 bits (324), Expect = 2e-30
 Identities = 72/128 (56%), Positives = 84/128 (65%), Gaps = 5/128 (3%)

Query: 62  EMAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS 119
           +  K D   Y+REMK Y P K   K K  DPNAPK PP  FF+F SE  PKIK  +PG+S
Sbjct: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89

Query: 120 IGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVAR-- 177
           I DVAKKLGEMWN + + +K PY  KA KLKEKYEKD+A +  KGK D AK  A  A   
Sbjct: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKC 149

Query: 178 KKVEEEDE 185
           KK +EED+
Sbjct: 150 KKKKEEDK 157



 Score = 33.9 bits (76), Expect = 0.095
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  ++  +K  +++ A
Sbjct: 60  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 116

Query: 65  KADKVRYDREMKDYGPAKGGKKKKD 89
              K +Y++++     A GGK K D
Sbjct: 117 VKLKEKYEKDI----AAFGGKGKPD 137


>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  129 bits (324), Expect = 2e-30
 Identities = 72/128 (56%), Positives = 84/128 (65%), Gaps = 5/128 (3%)

Query: 62  EMAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS 119
           +  K D   Y+REMK Y P K   K K  DPNAPK PP  FF+F SE  PKIK  +PG+S
Sbjct: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89

Query: 120 IGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVAR-- 177
           I DVAKKLGEMWN + + +K PY  KA KLKEKYEKD+A +  KGK D AK  A  A   
Sbjct: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKC 149

Query: 178 KKVEEEDE 185
           KK +EED+
Sbjct: 150 KKKKEEDK 157



 Score = 33.9 bits (76), Expect = 0.095
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  ++  +K  +++ A
Sbjct: 60  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 116

Query: 65  KADKVRYDREMKDYGPAKGGKKKKD 89
              K +Y++++     A GGK K D
Sbjct: 117 VKLKEKYEKDI----AAFGGKGKPD 137


>gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 227

 Score =  113 bits (283), Expect = 9e-26
 Identities = 61/102 (59%), Positives = 72/102 (70%), Gaps = 3/102 (2%)

Query: 86  KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITK 145
           K +DPNAPK PP  FF+F SE  PKIK  +PG+SI DVAKKLGEMWN + + +K PY  K
Sbjct: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142

Query: 146 AAKLKEKYEKDVADYKSKGKFDGAKGPAKVAR--KKVEEEDE 185
           A KLKEKYEKD+A +  KGK D AK  A  A   KK +EED+
Sbjct: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184



 Score = 33.9 bits (76), Expect = 0.095
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  ++  +K  +++ A
Sbjct: 87  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 143

Query: 65  KADKVRYDREMKDYGPAKGGKKKKD 89
              K +Y++++     A GGK K D
Sbjct: 144 VKLKEKYEKDI----AAFGGKGKPD 164


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 85.1 bits (209), Expect = 4e-17
 Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 1/148 (0%)

Query: 40  EFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSG 99
           EF    S    +  G       +  +  K +  ++ K        KK KDPNAPKRP S 
Sbjct: 494 EFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSA 553

Query: 100 FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVAD 159
           + L+ +  R KIKS +PGISI D++KK GE+W  ++  +K+ +  KA   +  YEK + +
Sbjct: 554 YMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKE 613

Query: 160 YKSKGKFDGAKGPAKVARKKVEEEDEEE 187
           Y+  G+ + +K      +KKV+ + E++
Sbjct: 614 YEG-GRGESSKRDKSKKKKKVKVKMEKK 640



 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 35/195 (17%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64
           DP  PK  MSAY  ++   RE+ K  +P + +   + SKK  E WK MS ++K ++D  A
Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISIT--DLSKKAGEIWKGMSKEKKEEWDRKA 600

Query: 65  KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVA 124
           +  +  Y++ MK+Y   +G   K+D +  K+            + K+K            
Sbjct: 601 EDARRDYEKAMKEYEGGRGESSKRDKSKKKK------------KVKVKMEK--------- 639

Query: 125 KKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEED 184
           K      ++   S +Q  ++++ K KE    D          + + G  K  +K+   ED
Sbjct: 640 KSTPSRGSSSKSSSRQ--LSESFKSKEFVSSD----------ESSSGENKSKKKRRRSED 687

Query: 185 EEEEEEEEEEEEEED 199
            EEEE        ED
Sbjct: 688 SEEEELASTPPSSED 702


>gi|169165476 PREDICTED: similar to high-mobility group box 2
          [Homo sapiens]
          Length = 91

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 48/88 (54%), Positives = 55/88 (62%), Gaps = 2/88 (2%)

Query: 1  MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
          MAKGD + PKGKMSA  FFV+TCREEHKK  P+ PV+F    K    R +   GKEK   
Sbjct: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59

Query: 61 DEMAKADKVRYDREMKDYGPAKGGKKKK 88
           +  +  K   D EMKDY PAKG KKKK
Sbjct: 60 IKSQRWVK-DADWEMKDYDPAKGHKKKK 86


>gi|239748075 PREDICTED: similar to high-mobility group box 2
          [Homo sapiens]
          Length = 91

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 48/88 (54%), Positives = 55/88 (62%), Gaps = 2/88 (2%)

Query: 1  MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
          MAKGD + PKGKMSA  FFV+TCREEHKK  P+ PV+F    K    R +   GKEK   
Sbjct: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59

Query: 61 DEMAKADKVRYDREMKDYGPAKGGKKKK 88
           +  +  K   D EMKDY PAKG KKKK
Sbjct: 60 IKSQRWVK-DADWEMKDYDPAKGHKKKK 86


>gi|239741972 PREDICTED: similar to high-mobility group box 2
          [Homo sapiens]
          Length = 91

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 48/88 (54%), Positives = 55/88 (62%), Gaps = 2/88 (2%)

Query: 1  MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
          MAKGD + PKGKMSA  FFV+TCREEHKK  P+ PV+F    K    R +   GKEK   
Sbjct: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59

Query: 61 DEMAKADKVRYDREMKDYGPAKGGKKKK 88
           +  +  K   D EMKDY PAKG KKKK
Sbjct: 60 IKSQRWVK-DADWEMKDYDPAKGHKKKK 86


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.306    0.128    0.364 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,657,641
Number of Sequences: 37866
Number of extensions: 518895
Number of successful extensions: 26361
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 196
Number of HSP's that attempted gapping in prelim test: 6621
Number of HSP's gapped (non-prelim): 9436
length of query: 200
length of database: 18,247,518
effective HSP length: 97
effective length of query: 103
effective length of database: 14,574,516
effective search space: 1501175148
effective search space used: 1501175148
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.