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Search of human proteins with 13899317
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13899317 SH3 domain binding glutamic acid-rich protein like
2 [Homo sapiens]
(107 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13899317 SH3 domain binding glutamic acid-rich protein like 2... 219 4e-58
gi|239757584 PREDICTED: similar to SH3-binding domain and glutam... 144 2e-35
gi|6677929 SH3-binding domain and glutamic acid-rich protein iso... 144 2e-35
gi|4506925 SH3 domain binding glutamic acid-rich protein like [H... 136 3e-33
gi|48762712 SH3-binding domain and glutamic acid-rich protein is... 80 3e-16
gi|13775198 SH3 domain binding glutamic acid-rich protein like 3... 72 1e-13
gi|30061569 La ribonucleoprotein domain family member 2 isoform ... 29 0.93
gi|8567388 period 3 [Homo sapiens] 27 3.5
gi|194306629 endoplasmic reticulum aminopeptidase 2 [Homo sapiens] 27 3.5
gi|11641261 endoplasmic reticulum aminopeptidase 2 [Homo sapiens] 27 3.5
gi|21493045 A-kinase anchor protein 6 [Homo sapiens] 27 3.5
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap... 27 3.5
gi|150170667 zinc finger protein 471 [Homo sapiens] 27 4.6
gi|38570064 hypothetical protein LOC136895 [Homo sapiens] 27 4.6
gi|221139804 RNA binding motif protein 24 isoform 3 [Homo sapiens] 26 6.1
gi|23308561 RNA binding motif protein 24 isoform 2 [Homo sapiens] 26 6.1
gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [H... 26 6.1
gi|28559061 DNA cytosine-5 methyltransferase 3 beta isoform 2 [H... 26 6.1
gi|5901940 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho... 26 6.1
gi|157738629 kinesin family member 13A isoform d [Homo sapiens] 26 6.1
gi|157738627 kinesin family member 13A isoform c [Homo sapiens] 26 6.1
gi|157738625 kinesin family member 13A isoform b [Homo sapiens] 26 6.1
gi|157738621 kinesin family member 13A isoform a [Homo sapiens] 26 6.1
gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens] 26 6.1
gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sap... 26 6.1
gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapi... 26 6.1
gi|11496279 male germ cell-associated kinase [Homo sapiens] 26 6.1
gi|133930786 egf-like module-containing mucin-like receptor 3 [H... 26 6.1
gi|23397498 transmembrane protein 92 [Homo sapiens] 26 6.1
gi|33286430 solute carrier family 7 (cationic amino acid transpo... 26 7.9
>gi|13899317 SH3 domain binding glutamic acid-rich protein like 2
[Homo sapiens]
Length = 107
Score = 219 bits (558), Expect = 4e-58
Identities = 107/107 (100%), Positives = 107/107 (100%)
Query: 1 MVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPT 60
MVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPT
Sbjct: 1 MVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPT 60
Query: 61 QGNPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKPRLASKAEP 107
QGNPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKPRLASKAEP
Sbjct: 61 QGNPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKPRLASKAEP 107
>gi|239757584 PREDICTED: similar to SH3-binding domain and glutamic
acid-rich protein [Homo sapiens]
Length = 218
Score = 144 bits (363), Expect = 2e-35
Identities = 67/104 (64%), Positives = 85/104 (81%)
Query: 1 MVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPT 60
MVI+VF+A+SSG +AI+KKQQ+VV FLEANKI+F+E+DI E+ R+WM +NVP EKKP
Sbjct: 64 MVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEKKPQ 123
Query: 61 QGNPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKPRLASK 104
G PLPPQIFN ++YCGD+DSFF +KE N ++SFLGL P SK
Sbjct: 124 NGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSK 167
>gi|6677929 SH3-binding domain and glutamic acid-rich protein
isoform a [Homo sapiens]
Length = 239
Score = 144 bits (363), Expect = 2e-35
Identities = 67/104 (64%), Positives = 85/104 (81%)
Query: 1 MVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPT 60
MVI+VF+A+SSG +AI+KKQQ+VV FLEANKI+F+E+DI E+ R+WM +NVP EKKP
Sbjct: 64 MVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDEDNRRWMRENVPGEKKPQ 123
Query: 61 QGNPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKPRLASK 104
G PLPPQIFN ++YCGD+DSFF +KE N ++SFLGL P SK
Sbjct: 124 NGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSK 167
>gi|4506925 SH3 domain binding glutamic acid-rich protein like [Homo
sapiens]
Length = 114
Score = 136 bits (343), Expect = 3e-33
Identities = 67/104 (64%), Positives = 80/104 (76%)
Query: 1 MVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPT 60
MVIRV+IASSSG AIKKKQQDV+ FLEANKI FEE DI +EE R+WM +NVP +P
Sbjct: 1 MVIRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPA 60
Query: 61 QGNPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKPRLASK 104
G PLPPQIFN +Y GDYD+FFE++E+N V++FLGL SK
Sbjct: 61 TGYPLPPQIFNESQYRGDYDAFFEARENNAVYAFLGLTAPPGSK 104
>gi|48762712 SH3-binding domain and glutamic acid-rich protein
isoform b [Homo sapiens]
Length = 128
Score = 80.5 bits (197), Expect = 3e-16
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 49 MYKNVPPEKKPTQGNPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKPRLASK 104
M +NVP EKKP G PLPPQIFN ++YCGD+DSFF +KE N ++SFLGL P SK
Sbjct: 1 MRENVPGEKKPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPDSK 56
>gi|13775198 SH3 domain binding glutamic acid-rich protein like 3
[Homo sapiens]
Length = 93
Score = 71.6 bits (174), Expect = 1e-13
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 3 IRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQG 62
+RV+ S +G IK +Q +V R L+ +I+++ VDI+ R E + G
Sbjct: 4 LRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRD--------EMRALAG 55
Query: 63 NP--LPPQIFNGDRYCGDYDSFFESKESNTVFSFLGL 97
NP PPQI NGD+YCGDY+ F E+ E NT+ FL L
Sbjct: 56 NPKATPPQIVNGDQYCGDYELFVEAVEQNTLQEFLKL 92
>gi|30061569 La ribonucleoprotein domain family member 2 isoform 3
[Homo sapiens]
Length = 358
Score = 28.9 bits (63), Expect = 0.93
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 19/102 (18%)
Query: 7 IASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNP-- 64
I+ +GF ++ ++ LEA K D T E + M K + PEK P G P
Sbjct: 250 ISLIAGFQRVQALTTNLNLILEALK------DSTEVEIVDEKMRKKIEPEKWPIPGPPPR 303
Query: 65 -LPPQIFN----------GDRYCGDYDSFFESKESNTVFSFL 95
+PP F+ G +C + F S+ ++ +L
Sbjct: 304 SVPPTDFSQLIDCPEFVPGQAFCSHTGNIFSSRANDVTVGYL 345
>gi|8567388 period 3 [Homo sapiens]
Length = 1201
Score = 26.9 bits (58), Expect = 3.5
Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 20/108 (18%)
Query: 3 IRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQR-QWMYKNVPPEK---- 57
+ V ++S G + Q+ +V +++ V+ T +E+ Q +Y +V K
Sbjct: 415 VHVSVSSGYGSLGSSGSQEQLVSIASSSEASGHRVEETKAEQMTLQQVYASVNKIKNLGQ 474
Query: 58 ------------KPTQGNPLPPQIFNGDRYCGDYDSFFESKESNTVFS 93
KP G P NG C + SF ++ ++N+V++
Sbjct: 475 QLYIESMTKSSFKPVTGTRTEP---NGGGECKTFTSFHQTLKNNSVYT 519
>gi|194306629 endoplasmic reticulum aminopeptidase 2 [Homo sapiens]
Length = 960
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 3 IRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMS-----EEQRQWMYKNVP 54
IR+ I+ ++ + K K Q+V F E+ + + +DI + + +W+ KN+P
Sbjct: 894 IRMIISGTTAHFSSKDKLQEVKLFFESLEAQGSHLDIFQTVLETITKNIKWLEKNLP 950
>gi|11641261 endoplasmic reticulum aminopeptidase 2 [Homo sapiens]
Length = 960
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 3 IRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMS-----EEQRQWMYKNVP 54
IR+ I+ ++ + K K Q+V F E+ + + +DI + + +W+ KN+P
Sbjct: 894 IRMIISGTTAHFSSKDKLQEVKLFFESLEAQGSHLDIFQTVLETITKNIKWLEKNLP 950
>gi|21493045 A-kinase anchor protein 6 [Homo sapiens]
Length = 2319
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 4 RVFIASSSGFVAIKKKQQDVVRFL-EANKIEFEEVDITMSEEQRQWMYKNVPPE 56
+V S+G + + Q++ +L + + + D+ MSEEQ+Q +YK E
Sbjct: 952 KVHSVGSNGLLDFDSEYQELWDWLIDMESLVMDSHDLMMSEEQQQHLYKRYSVE 1005
>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
sapiens]
Length = 955
Score = 26.9 bits (58), Expect = 3.5
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 15 AIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQ 47
A+K+K++ + R E +++ ++ D + E +RQ
Sbjct: 577 ALKEKEEQLTRVTEVQRLQAQQADAALEEFKRQ 609
>gi|150170667 zinc finger protein 471 [Homo sapiens]
Length = 626
Score = 26.6 bits (57), Expect = 4.6
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 22 DVVRFLEANKIEFEEVDITMSEEQRQWM 49
+VV+ + + + F++V I S+E+ QWM
Sbjct: 4 EVVKVMPQDLVTFKDVAIDFSQEEWQWM 31
>gi|38570064 hypothetical protein LOC136895 [Homo sapiens]
Length = 590
Score = 26.6 bits (57), Expect = 4.6
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 18 KKQQDVVRFLEANKIEFEEVDITMSEEQR------QWMYKNVPP--EKKPTQGNPLPPQI 69
K V N +E +DI M +++ Q +Y + P EK P PP+
Sbjct: 188 KAYDSTVLKTRGNPYRYELIDIPMDSKKKALTWPGQGVYYDFPRGVEKNKPVFYPKPPKT 247
Query: 70 FNGDRYCGDYDSFFESKESN 89
F + +D +KE+N
Sbjct: 248 FAPNTSLNSWDPICSAKEAN 267
>gi|221139804 RNA binding motif protein 24 isoform 3 [Homo sapiens]
Length = 178
Score = 26.2 bits (56), Expect = 6.1
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 73 DRYCGDYDSFFESKESNTVFSFLGLKPRL 101
+R C D + + +++N ++LG KPR+
Sbjct: 8 ERACKDPNPIIDGRKANVNLAYLGAKPRI 36
>gi|23308561 RNA binding motif protein 24 isoform 2 [Homo sapiens]
Length = 191
Score = 26.2 bits (56), Expect = 6.1
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 73 DRYCGDYDSFFESKESNTVFSFLGLKPRL 101
+R C D + + +++N ++LG KPR+
Sbjct: 21 ERACKDPNPIIDGRKANVNLAYLGAKPRI 49
>gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [Homo
sapiens]
Length = 845
Score = 26.2 bits (56), Expect = 6.1
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 4 RVFIASSSGFVAIKK-KQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKP 59
R F VA+K ++D+ RFLE N + + + ++ + R + + N+P +P
Sbjct: 682 RPFFWMFENVVAMKVGDKRDISRFLECNPVMIDAIKVSAAHRAR-YFWGNLPGMNRP 737
>gi|28559061 DNA cytosine-5 methyltransferase 3 beta isoform 2 [Homo
sapiens]
Length = 833
Score = 26.2 bits (56), Expect = 6.1
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 4 RVFIASSSGFVAIKK-KQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKP 59
R F VA+K ++D+ RFLE N + + + ++ + R + + N+P +P
Sbjct: 670 RPFFWMFENVVAMKVGDKRDISRFLECNPVMIDAIKVSAAHRAR-YFWGNLPGMNRP 725
>gi|5901940 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Homo
sapiens]
Length = 853
Score = 26.2 bits (56), Expect = 6.1
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 4 RVFIASSSGFVAIKK-KQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKP 59
R F VA+K ++D+ RFLE N + + + ++ + R + + N+P +P
Sbjct: 690 RPFFWMFENVVAMKVGDKRDISRFLECNPVMIDAIKVSAAHRAR-YFWGNLPGMNRP 745
>gi|157738629 kinesin family member 13A isoform d [Homo sapiens]
Length = 1749
Score = 26.2 bits (56), Expect = 6.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 54 PPEKKPTQGNPLPPQIFNGDRYCGDYDSFFESKESNT 90
PP QG PP++F D YC F+ ESNT
Sbjct: 39 PPPSNTKQGERKPPKVFAFD-YC-----FWSMDESNT 69
>gi|157738627 kinesin family member 13A isoform c [Homo sapiens]
Length = 1757
Score = 26.2 bits (56), Expect = 6.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 54 PPEKKPTQGNPLPPQIFNGDRYCGDYDSFFESKESNT 90
PP QG PP++F D YC F+ ESNT
Sbjct: 39 PPPSNTKQGERKPPKVFAFD-YC-----FWSMDESNT 69
>gi|157738625 kinesin family member 13A isoform b [Homo sapiens]
Length = 1770
Score = 26.2 bits (56), Expect = 6.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 54 PPEKKPTQGNPLPPQIFNGDRYCGDYDSFFESKESNT 90
PP QG PP++F D YC F+ ESNT
Sbjct: 39 PPPSNTKQGERKPPKVFAFD-YC-----FWSMDESNT 69
>gi|157738621 kinesin family member 13A isoform a [Homo sapiens]
Length = 1805
Score = 26.2 bits (56), Expect = 6.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%)
Query: 54 PPEKKPTQGNPLPPQIFNGDRYCGDYDSFFESKESNT 90
PP QG PP++F D YC F+ ESNT
Sbjct: 39 PPPSNTKQGERKPPKVFAFD-YC-----FWSMDESNT 69
>gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens]
Length = 236
Score = 26.2 bits (56), Expect = 6.1
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 73 DRYCGDYDSFFESKESNTVFSFLGLKPRL 101
+R C D + + +++N ++LG KPR+
Sbjct: 66 ERACKDPNPIIDGRKANVNLAYLGAKPRI 94
>gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo
sapiens]
Length = 1003
Score = 26.2 bits (56), Expect = 6.1
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 59 PTQGNPLPPQIFNG----DRYCGDYDSFFESKESNTVFSFLGLKPRLASK 104
P QG P+ IF+G D G+ SFF +E+ TV S+L L +SK
Sbjct: 770 PRQGFPI---IFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSK 816
>gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo
sapiens]
Length = 1003
Score = 26.2 bits (56), Expect = 6.1
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 59 PTQGNPLPPQIFNG----DRYCGDYDSFFESKESNTVFSFLGLKPRLASK 104
P QG P+ IF+G D G+ SFF +E+ TV S+L L +SK
Sbjct: 770 PRQGFPI---IFHGVMGKDEREGNSPSFFNPEEAATVTSYLKLLLAPSSK 816
>gi|11496279 male germ cell-associated kinase [Homo sapiens]
Length = 623
Score = 26.2 bits (56), Expect = 6.1
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 25 RFLEANKIEFEEVDITMSEEQRQWMYK--NVPPEKKPTQGNPLPPQIFNGDRYCGDYDSF 82
RF + I + + S E Q M + N P+K+PT L F + G +
Sbjct: 237 RFPQCVPINLKTLIPNASNEAIQLMTEMLNWDPKKRPTASQALKHPYFQVGQVLGPSSNH 296
Query: 83 FESKES-NTVFSFLGLKPRLASKAEP 107
ESK+S N L KP L + EP
Sbjct: 297 LESKQSLNKQLQPLESKPSLV-EVEP 321
>gi|133930786 egf-like module-containing mucin-like receptor 3 [Homo
sapiens]
Length = 652
Score = 26.2 bits (56), Expect = 6.1
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 34 FEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQI 69
F E+ + SE + + + P+ KP++G+ P Q+
Sbjct: 613 FREIVKSKSESETYTLSSKMGPDSKPSEGDVFPGQV 648
>gi|23397498 transmembrane protein 92 [Homo sapiens]
Length = 159
Score = 26.2 bits (56), Expect = 6.1
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 35 EEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDRYCGD 78
E V +++S + + P PT P PP F + Y GD
Sbjct: 107 ERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRPEEYTGD 150
>gi|33286430 solute carrier family 7 (cationic amino acid
transporter, y+ system), member 8 isoform b [Homo
sapiens]
Length = 332
Score = 25.8 bits (55), Expect = 7.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 43 EEQRQWMYKNVPPEKKPTQGNPLP 66
EEQ+Q MY+ P + K G P P
Sbjct: 309 EEQQQPMYQPTPTKDKDVAGQPQP 332
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,295,602
Number of Sequences: 37866
Number of extensions: 192304
Number of successful extensions: 621
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 605
Number of HSP's gapped (non-prelim): 31
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.