Guide to the Human Genome
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Name: EMR3 Sequence: fasta or formatted (652aa) NCBI GI: 133930786
Description:

egf-like module-containing mucin-like receptor 3

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         37           2
 C cysteine            4.3         28           1
 D aspartate           2.9         19           1
 E glutamate           4.1         27           2
 F phenylalanine       5.4         35           2
 G glycine             5.4         35           1
 H histidine           2.0         13           1
 I isoleucine          5.1         33           2
 K lysine              5.5         36           2
 L leucine            12.0         78           3
 M methionine          2.1         14           1
 N asparagine          4.9         32           2
 P proline             3.4         22           2
 Q glutamine           5.2         34           2
 R arginine            2.8         18           1
 S serine              9.7         63           2
 T threonine           7.8         51           2
 V valine              7.1         46           2
 W tryptophan          1.7         11           1
 Y tyrosine            3.1         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   egf-like module-containing mucin-like receptor 3 [H... 
EMR2                  0.466   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.448   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.428   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.418   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.417   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.409   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.407   egf-like module containing, mucin-like, hormone rece...
EMR1                  0.330   egf-like module containing, mucin-like, hormone rece...
CD97                  0.249   CD97 antigen isoform 2 precursor 
ELTD1                 0.223   EGF, latrophilin and seven transmembrane domain con...
CD97                  0.220   CD97 antigen isoform 1 precursor 
CD97                  0.219   CD97 antigen isoform 3 precursor 
LPHN3                 0.200   latrophilin 3 precursor 
LPHN2                 0.196   latrophilin 2 precursor 
LPHN1                 0.190   latrophilin 1 isoform 1 precursor 
LPHN1                 0.190   latrophilin 1 isoform 2 precursor 
CELSR1                0.141   cadherin EGF LAG seven-pass G-type receptor 1 
GPR133                0.133   G protein-coupled receptor 133 
CELSR2                0.133   cadherin EGF LAG seven-pass G-type receptor 2 
GPR112                0.124   G-protein coupled receptor 112 
GPR64                 0.121   G protein-coupled receptor 64 isoform 3 
GPR64                 0.121   G protein-coupled receptor 64 isoform 2 
GPR64                 0.121   G protein-coupled receptor 64 isoform 1 
GPR64                 0.121   G protein-coupled receptor 64 isoform 4 
CELSR3                0.121   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
BAI1                  0.100   brain-specific angiogenesis inhibitor 1 precursor [...
GPR144                0.096   G protein-coupled receptor 144 
BAI3                  0.092   brain-specific angiogenesis inhibitor 3 
GPR126                0.091   G protein-coupled receptor 126 alpha 1 precursor [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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