Guide to the Human Genome
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Name: ZNF471 Sequence: fasta or formatted (626aa) NCBI GI: 150170667
Description:

zinc finger protein 471

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         24           1
 C cysteine            5.9         37           1
 D aspartate           2.2         14           2
 E glutamate           9.6         60           2
 F phenylalanine       5.1         32           1
 G glycine             6.1         38           1
 H histidine           7.2         45           2
 I isoleucine          4.8         30           2
 K lysine             10.1         63           2
 L leucine             4.8         30           2
 M methionine          1.9         12           2
 N asparagine          2.2         14           1
 P proline             3.4         21           1
 Q glutamine           5.8         36           1
 R arginine            5.4         34           2
 S serine              7.7         48           3
 T threonine           6.2         39           1
 V valine              3.0         19           2
 W tryptophan          1.1          7           1
 Y tyrosine            3.7         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 471 
ZNF470                0.633   zinc finger protein 470 
ZFP28                 0.548   zinc finger protein 28 
ZNF184                0.491   zinc finger protein 184 
ZNF583                0.482   zinc finger protein 583 
ZNF583                0.482   zinc finger protein 583 
ZNF583                0.482   zinc finger protein 583 
ZNF420                0.481   zinc finger protein 420 
ZNF135                0.479   zinc finger protein 135 
LOC100287429          0.473   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.473   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.473   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.473   zinc finger protein 84 
ZNF84                 0.473   zinc finger protein 84 
ZNF624                0.472   zinc finger protein 624 
ZNF546                0.470   zinc finger protein 546 
ZNF665                0.469   zinc finger protein 665 
ZNF568                0.467   zinc finger protein 568 
ZNF569                0.466   zinc finger protein 569 
ZNF780A               0.464   zinc finger protein 780A isoform b 
ZNF780A               0.464   zinc finger protein 780A isoform b 
ZNF780A               0.460   zinc finger protein 780A isoform a 
ZNF160                0.460   zinc finger protein 160 
ZNF160                0.460   zinc finger protein 160 
ZNF160                0.460   zinc finger protein 160 
ZNF540                0.458   zinc finger protein 540 
ZNF30                 0.458   zinc finger protein 30 isoform b 
ZNF283                0.457   zinc finger protein 283 
ZNF780B               0.455   zinc finger protein 780B 
ZNF30                 0.455   zinc finger protein 30 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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