Guide to the Human Genome
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Name: SH3BGRL2 Sequence: fasta or formatted (107aa) NCBI GI: 13899317
Description:

SH3 domain binding glutamic acid-rich protein like 2

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          5           1
 C cysteine            0.9          1           1
 D aspartate           4.7          5           1
 E glutamate           9.3         10           2
 F phenylalanine       8.4          9           2
 G glycine             4.7          5           1
 H histidine           0.0          0           0
 I isoleucine          5.6          6           1
 K lysine              9.3         10           3
 L leucine             4.7          5           1
 M methionine          2.8          3           1
 N asparagine          4.7          5           1
 P proline             7.5          8           2
 Q glutamine           5.6          6           2
 R arginine            4.7          5           1
 S serine              8.4          9           3
 T threonine           2.8          3           1
 V valine              7.5          8           2
 W tryptophan          0.9          1           1
 Y tyrosine            2.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3 domain binding glutamic acid-rich protein like 2... 
LOC100291671          0.613   PREDICTED: similar to SH3-binding domain and glutam...
SH3BGR                0.613   SH3-binding domain and glutamic acid-rich protein iso...
SH3BGRL               0.572   SH3 domain binding glutamic acid-rich protein like [H...
SH3BGR                0.284   SH3-binding domain and glutamic acid-rich protein is...
SH3BGRL3              0.242   SH3 domain binding glutamic acid-rich protein like 3...
LARP1B                0.021   La ribonucleoprotein domain family member 2 isoform ...
PER3                  0.010   period 3 
ERAP2                 0.010   endoplasmic reticulum aminopeptidase 2 
ERAP2                 0.010   endoplasmic reticulum aminopeptidase 2 
AKAP6                 0.010   A-kinase anchor protein 6 
CCDC46                0.010   coiled-coil domain containing 46 isoform a 
ZNF471                0.010   zinc finger protein 471 
C7orf31               0.010   hypothetical protein LOC136895 
RBM24                 0.005   RNA binding motif protein 24 isoform 3 
RBM24                 0.005   RNA binding motif protein 24 isoform 2 
DNMT3B                0.005   DNA cytosine-5 methyltransferase 3 beta isoform 6 [H...
DNMT3B                0.005   DNA cytosine-5 methyltransferase 3 beta isoform 2 [H...
DNMT3B                0.005   DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho...
KIF13A                0.005   kinesin family member 13A isoform d 
KIF13A                0.005   kinesin family member 13A isoform c 
KIF13A                0.005   kinesin family member 13A isoform b 
KIF13A                0.005   kinesin family member 13A isoform a 
RBM24                 0.005   RNA binding motif protein 24 isoform 1 
MOV10                 0.005   Mov10, Moloney leukemia virus 10, homolog 
MOV10                 0.005   Mov10, Moloney leukemia virus 10, homolog 
MAK                   0.005   male germ cell-associated kinase 
EMR3                  0.005   egf-like module-containing mucin-like receptor 3 [H...
TMEM92                0.005   transmembrane protein 92 
SLC7A8                0.005   solute carrier family 7 (cationic amino acid transpo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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