Guide to the Human Genome
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Name: KIF13A Sequence: fasta or formatted (1805aa) NCBI GI: 157738621
Description:

kinesin family member 13A isoform a

Referenced in:

Kinesins

Other entries for this name:
alt prot [1770aa] kinesin family member 13A isoform b
alt prot [1757aa] kinesin family member 13A isoform c
alt prot [1749aa] kinesin family member 13A isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2        112           2
 C cysteine            1.6         29           2
 D aspartate           5.4         97           2
 E glutamate           9.5        171           4
 F phenylalanine       2.7         49           2
 G glycine             5.1         92           2
 H histidine           2.3         41           2
 I isoleucine          4.5         81           3
 K lysine              6.4        115           2
 L leucine             8.9        161           2
 M methionine          1.7         30           2
 N asparagine          4.5         82           2
 P proline             4.7         85           3
 Q glutamine           4.7         85           2
 R arginine            5.6        101           2
 S serine              9.9        178           3
 T threonine           5.2         94           2
 V valine              7.6        137           2
 W tryptophan          1.2         21           1
 Y tyrosine            2.4         44           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 13A isoform a 
KIF13A                0.974   kinesin family member 13A isoform b 
KIF13A                0.964   kinesin family member 13A isoform c 
KIF13A                0.955   kinesin family member 13A isoform d 
KIF13B                0.509   kinesin family member 13B 
KIF1A                 0.168   axonal transport of synaptic vesicles 
KIF1B                 0.161   kinesin family member 1B isoform b 
KIF1C                 0.151   kinesin family member 1C 
KIF1B                 0.151   kinesin family member 1B isoform alpha 
KIF16B                0.127   kinesin-like motor protein C20orf23 
KIF14                 0.124   kinesin family member 14 
STARD9                0.085   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.085   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.085   PREDICTED: StAR-related lipid transfer (START) doma...
KIF3A                 0.077   kinesin family member 3A 
KIF17                 0.076   kinesin family member 17 isoform b 
KIF17                 0.076   kinesin family member 17 isoform a 
KIF3B                 0.072   kinesin family member 3B 
KIF4B                 0.070   kinesin family member 4B 
KIF4A                 0.069   kinesin family member 4 
KIF15                 0.065   kinesin family member 15 
KIF18B                0.063   kinesin family member 18B 
KIF27                 0.062   kinesin family member 27 
KIF3C                 0.062   kinesin family member 3C 
KIF5C                 0.062   kinesin family member 5C 
CENPE                 0.061   centromere protein E 
KIF21B                0.060   kinesin family member 21B 
KIF5B                 0.060   kinesin family member 5B 
KIF5A                 0.060   kinesin family member 5A 
KIF21A                0.059   kinesin family member 21A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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