Guide to the Human Genome
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Search of human proteins with 6912630

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6912630 interferon-induced protein with tetratricopeptide
repeats 5 [Homo sapiens]
         (482 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912630 interferon-induced protein with tetratricopeptide rep...   971   0.0  
gi|116534937 interferon-induced protein with tetratricopeptide r...   538   e-153
gi|58330892 interferon-induced protein with tetratricopeptide re...   520   e-147
gi|153082755 interferon-induced protein with tetratricopeptide r...   403   e-112
gi|31542980 interferon-induced protein with tetratricopeptide re...   377   e-104
gi|72534658 interferon-induced protein with tetratricopeptide re...   377   e-104
gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens]       54   3e-07
gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens]       54   3e-07
gi|83415184 transmembrane and tetratricopeptide repeat containin...    53   7e-07
gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...    45   2e-04
gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo ...    43   7e-04
gi|28558993 intraflagellar transport 88 homolog isoform 1 [Homo ...    41   0.002
gi|28329439 intraflagellar transport 88 homolog isoform 2 [Homo ...    41   0.002
gi|25952122 Bardet-Biedl syndrome 4 [Homo sapiens]                     40   0.006
gi|170784869 tetratricopeptide repeat domain 13 isoform b [Homo ...    40   0.006
gi|7662078 tetratricopeptide repeat domain 37 [Homo sapiens]           38   0.018
gi|189011544 ubiquitously transcribed tetratricopeptide repeat, ...    35   0.15 
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]         35   0.20 
gi|167466177 cell division cycle protein 27 isoform 1 [Homo sapi...    34   0.26 
gi|167466175 cell division cycle protein 27 isoform 2 [Homo sapi...    34   0.26 
gi|239741018 PREDICTED: hypothetical protein XP_002342056 [Homo ...    33   0.44 
gi|4557269 adenylosuccinate lyase isoform a [Homo sapiens]             33   0.58 
gi|54607135 translocase of outer mitochondrial membrane 70 homol...    33   0.58 
gi|22749211 transmembrane and tetratricopeptide repeat containin...    33   0.58 
gi|144446030 lymphocyte antigen 75 [Homo sapiens]                      33   0.58 
gi|225735593 RNA polymerase II associated protein 3 isoform 2 [H...    32   0.98 
gi|225735591 RNA polymerase II associated protein 3 isoform 1 [H...    32   0.98 
gi|52630440 FK506-binding protein 8 [Homo sapiens]                     32   1.3  
gi|28603842 tetratricopeptide repeat domain 9C [Homo sapiens]          32   1.3  
gi|118766328 transmembrane and tetratricopeptide repeat containi...    32   1.3  

>gi|6912630 interferon-induced protein with tetratricopeptide
           repeats 5 [Homo sapiens]
          Length = 482

 Score =  971 bits (2510), Expect = 0.0
 Identities = 482/482 (100%), Positives = 482/482 (100%)

Query: 1   MSEIRKDTLKAILLELECHFTWNLLKEDIDLFEVEDTIGQQLEFLTTKSRLALYNLLAYV 60
           MSEIRKDTLKAILLELECHFTWNLLKEDIDLFEVEDTIGQQLEFLTTKSRLALYNLLAYV
Sbjct: 1   MSEIRKDTLKAILLELECHFTWNLLKEDIDLFEVEDTIGQQLEFLTTKSRLALYNLLAYV 60

Query: 61  KHLKGQNKDALECLEQAEEIIQQEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKI 120
           KHLKGQNKDALECLEQAEEIIQQEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKI
Sbjct: 61  KHLKGQNKDALECLEQAEEIIQQEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKI 120

Query: 121 GNVCKKLSSPSNYKLECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIGY 180
           GNVCKKLSSPSNYKLECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIGY
Sbjct: 121 GNVCKKLSSPSNYKLECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIGY 180

Query: 181 AITVYRLDDSDREGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEE 240
           AITVYRLDDSDREGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEE
Sbjct: 181 AITVYRLDDSDREGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEE 240

Query: 241 ILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQI 300
           ILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQI
Sbjct: 241 ILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQI 300

Query: 301 KKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDI 360
           KKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDI
Sbjct: 301 KKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDI 360

Query: 361 FRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSAL 420
           FRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSAL
Sbjct: 361 FRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSAL 420

Query: 421 KKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFLTALCELRL 480
           KKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFLTALCELRL
Sbjct: 421 KKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFLTALCELRL 480

Query: 481 SI 482
           SI
Sbjct: 481 SI 482


>gi|116534937 interferon-induced protein with tetratricopeptide
           repeats 1 isoform 2 [Homo sapiens]
          Length = 478

 Score =  538 bits (1385), Expect = e-153
 Identities = 266/464 (57%), Positives = 351/464 (75%), Gaps = 3/464 (0%)

Query: 9   LKAILLELECHFTWNLLKEDIDLFEVEDTIGQQLEFLTTKSRLALYNLLAYVKHLKGQNK 68
           +K  L +L CHFTW L  +D ++ ++E+ +  Q+EFL TK  + ++NLLAYVKHLKGQN+
Sbjct: 10  VKDSLEQLRCHFTWELSIDDDEMPDLENRVLDQIEFLDTKYSVGIHNLLAYVKHLKGQNE 69

Query: 69  DALECLEQAEEIIQQEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKIGNVCKKLS 128
           +AL+ L++AE ++Q+EH ++  VRSLVTWGN+AW+YYHM +L EAQ Y  K+ N+CKKLS
Sbjct: 70  EALKSLKEAENLMQEEHDNQANVRSLVTWGNFAWMYYHMGRLAEAQTYLDKVENICKKLS 129

Query: 129 SPSNYKLECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIGYAITVYRLD 188
           +P  Y++ECPE DCE+GWALLK GGK Y++AKA FEK LEV+P+NPE + GYAI+ YRLD
Sbjct: 130 NPFRYRMECPEIDCEEGWALLKCGGKNYERAKACFEKVLEVDPENPESSAGYAISAYRLD 189

Query: 189 DSD-REGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEEILDQISS 247
                  + K FSL PLR+AV LNPDN YIKV LALKLQD   EAEGEKYIEE L  +SS
Sbjct: 190 GFKLATKNHKPFSLLPLRQAVRLNPDNGYIKVLLALKLQDEGQEAEGEKYIEEALANMSS 249

Query: 248 QPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKATHNR 307
           Q YV RYAAKFYRRK S +KALELLKKAL+ TPTS  LHHQ+GLCY+AQMIQIK+AT  +
Sbjct: 250 QTYVFRYAAKFYRRKGSVDKALELLKKALQETPTSVLLHHQIGLCYKAQMIQIKEATKGQ 309

Query: 308 PKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRL 367
           P+G+++ K+D++I SAIFHF++A+E+   F  A+ DLA MY E G +  AE+ F+K L +
Sbjct: 310 PRGQNREKLDKMIRSAIFHFESAVEKKPTFEVAHLDLARMYIEAGNHRKAEENFQKLLCM 369

Query: 368 ENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSALKKLSTKR 427
           + + ++    IH+HYGRFQEF +KS+  AI HYL+A+K++  S  R K  ++LKKL  ++
Sbjct: 370 KPVVEETMQDIHFHYGRFQEFQKKSDVNAIIHYLKAIKIEQASLTRDKSINSLKKLVLRK 429

Query: 428 LCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKI--DPENA 469
           L   ALD++SLS LGFVYKLEG   +A EYYE+A ++  D EN+
Sbjct: 430 LRRKALDLESLSLLGFVYKLEGNMNEALEYYERALRLAADFENS 473


>gi|58330892 interferon-induced protein with tetratricopeptide
           repeats 1-like [Homo sapiens]
          Length = 474

 Score =  520 bits (1339), Expect = e-147
 Identities = 258/453 (56%), Positives = 337/453 (74%), Gaps = 1/453 (0%)

Query: 13  LLELECHFTWNLLKEDIDLFEVEDTIGQQLEFLTTKSRLALYNLLAYVKHLKGQNKDALE 72
           L++L CHFTW LL E  ++ ++E+ I ++++FL TK  + ++NLLAYVKHLKGQN++AL 
Sbjct: 14  LIQLRCHFTWKLLIEAPEIPDLENRIWEEIQFLDTKYNVGIHNLLAYVKHLKGQNEEALV 73

Query: 73  CLEQAEEIIQQEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKIGNVCKKLSSPSN 132
            L++AE++IQ+EH+++ ++RSLVTWGN+AWVYYHM +L EAQ Y  K+ N CKK ++PS 
Sbjct: 74  SLKKAEDLIQKEHANQADIRSLVTWGNFAWVYYHMGRLAEAQTYLDKVENTCKKFANPSR 133

Query: 133 YKLECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIGYAITVYRLDD-SD 191
           Y++ECPE DCE+GWAL K GGK Y++AK  FEKALE  P+NPEFN GYAITVYRLD  + 
Sbjct: 134 YRMECPEVDCEEGWALAKCGGKNYERAKTCFEKALEGNPENPEFNTGYAITVYRLDKFNT 193

Query: 192 REGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEEILDQISSQPYV 251
             G  K+FSL  L++AV LNPD+ YI+V LALKLQD   EAEGEKYIEE L  ISSQ YV
Sbjct: 194 ASGRNKAFSLHVLKRAVRLNPDDVYIRVLLALKLQDEGQEAEGEKYIEEALTSISSQAYV 253

Query: 252 LRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGK 311
            +YAAKFYRRK S +KALELLK ALE TPTS+FLHHQMGLCYRAQMIQIK+AT+ +P+G+
Sbjct: 254 FQYAAKFYRRKGSVDKALELLKMALETTPTSAFLHHQMGLCYRAQMIQIKEATNWQPRGQ 313

Query: 312 DKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLENIT 371
           D+  VD L+  AI  F+  +     F  AY DLA  YAE G +  AE+ F+K LR++   
Sbjct: 314 DRETVDRLVQLAICKFEKTIMLKRTFEMAYVDLAETYAEIGHHRKAEEHFQKGLRMKIFE 373

Query: 372 DDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSALKKLSTKRLCHN 431
           D  K +IHYHYGRFQE H KS++ AI HYL+ LK++  S  R KL +AL+KL+ + +  N
Sbjct: 374 DQLKQEIHYHYGRFQEHHGKSQDKAITHYLKGLKIEKMSHSREKLLNALEKLAKRCIHQN 433

Query: 432 ALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKI 464
              V+S+S LG ++KL+GE   A   YE+A ++
Sbjct: 434 VRVVESVSLLGLIHKLKGEVSDALLCYERALRL 466


>gi|153082755 interferon-induced protein with tetratricopeptide
           repeats 2 [Homo sapiens]
          Length = 472

 Score =  403 bits (1035), Expect = e-112
 Identities = 215/464 (46%), Positives = 299/464 (64%), Gaps = 13/464 (2%)

Query: 1   MSEIRKDTLKAILLELECHFTWNLLKEDIDLFEVEDTIGQQLEFLTTKSRLALYNLLAYV 60
           MSE  K++L++ L +L+CHFTWNL++ +  L + ED +  + EF   + +  + NLLAY+
Sbjct: 1   MSENNKNSLESSLRQLKCHFTWNLMEGENSLDDFEDKVFYRTEFQNREFKATMCNLLAYL 60

Query: 61  KHLKGQNKDALECLEQAEEIIQQEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKI 120
           KHLKGQN+ ALECL +AEE+IQQEH+D+ E+RSLVTWGNYAWVYYHM +L + Q Y  K+
Sbjct: 61  KHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKV 120

Query: 121 GNVCKKLSSPSNYKLECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIGY 180
            +VC+K SSP  Y++E PE DCE+GW  LK GG   ++AK  FEKALE +P NPEF  G 
Sbjct: 121 KHVCEKFSSP--YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGL 178

Query: 181 AITVYRLDDSDREGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKL----QDVHAEAEGEK 236
           AI  YRLD+     +    ++ PLR+A+ LNPDN Y+KV LALKL    ++   E EGEK
Sbjct: 179 AIASYRLDNWPPSQN----AIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEK 234

Query: 237 YIEEILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQ 296
            +EE L++      VLR AAKFYRRK+  +KA+ELLKKALE  P +++LH Q+G CYRA+
Sbjct: 235 LVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAK 294

Query: 297 MIQIKKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSN 356
           + Q+     N   GK KL   ELI  A+ H K A E +       + LA+++A   QY +
Sbjct: 295 VFQVMNLRENGMYGKRKLL--ELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYED 352

Query: 357 AEDIFRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKL 416
           AE  F+K    E +T   K  +H  YG FQ +  K E+ AIHH++E +K+  +S  + K+
Sbjct: 353 AEYYFQKEFSKE-LTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKM 411

Query: 417 TSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEK 460
              L+K++  RL  N  D ++L  L F+ +L  + +QA E  E+
Sbjct: 412 KDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSER 455


>gi|31542980 interferon-induced protein with tetratricopeptide
           repeats 3 [Homo sapiens]
          Length = 490

 Score =  377 bits (968), Expect = e-104
 Identities = 205/460 (44%), Positives = 291/460 (63%), Gaps = 20/460 (4%)

Query: 1   MSEIRKDTLKAILLELECHFTWNLLKEDIDLFEVEDTIGQQLEFLTTKSRLALYNLLAYV 60
           MSE+ K++L+ IL +L+CHFTWNL KED    ++ED +  Q+EFL T+ +  +YNLLAY+
Sbjct: 1   MSEVTKNSLEKILPQLKCHFTWNLFKEDSVSRDLEDRVCNQIEFLNTEFKATMYNLLAYI 60

Query: 61  KHLKGQNKDALECLEQAEEIIQQEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKI 120
           KHL G N+ ALECL QAEE+IQQEH+D+ E+RSLVTWGNYAWVYYH+ +L +AQ Y  K+
Sbjct: 61  KHLDGNNEAALECLRQAEELIQQEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQIYVDKV 120

Query: 121 GNVCKKLSSPSNYKLECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIGY 180
              CKK S+P  Y +E  E DCE+GW  LK G    ++AK  FEKALE +P+NPEF+ G 
Sbjct: 121 KQTCKKFSNP--YSIEYSELDCEEGWTQLKCGRN--ERAKVCFEKALEEKPNNPEFSSGL 176

Query: 181 AITVYRLDDSDREGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEE 240
           AI +Y LD+       K FS   L++A+ L+PDN Y+KV L LKLQ ++ EAEGE+++EE
Sbjct: 177 AIAMYHLDNHPE----KQFSTDVLKQAIELSPDNQYVKVLLGLKLQKMNKEAEGEQFVEE 232

Query: 241 ILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQI 300
            L++   Q  VLR AAKFYRRK   +KA+EL ++ LE TP + +L+HQ+G CY+A++ Q+
Sbjct: 233 ALEKSPCQTDVLRSAAKFYRRKGDLDKAIELFQRVLESTPNNGYLYHQIGCCYKAKVRQM 292

Query: 301 KKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDI 360
           +    +   G +K  ++ L   A+ +   A+E+      AY+DLA  + E   Y      
Sbjct: 293 QNTGESEASG-NKEMIEALKQYAMDYSNKALEKGLNPLNAYSDLAE-FLETECYQTP--- 347

Query: 361 FRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSAL 420
           F K      + D  K Q H  Y   Q+++ KSE+TA+ H LE L +  +S  + ++    
Sbjct: 348 FNK-----EVPDAEKQQSHQRYCNLQKYNGKSEDTAVQHGLEGLSISKKSTDKEEIKDQP 402

Query: 421 KKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEK 460
           + +S   L  NA +   L   G ++K  G+  QAA+ YEK
Sbjct: 403 QNVSENLLPQNAPNYWYLQ--GLIHKQNGDLLQAAKCYEK 440


>gi|72534658 interferon-induced protein with tetratricopeptide
           repeats 3 [Homo sapiens]
          Length = 490

 Score =  377 bits (968), Expect = e-104
 Identities = 205/460 (44%), Positives = 291/460 (63%), Gaps = 20/460 (4%)

Query: 1   MSEIRKDTLKAILLELECHFTWNLLKEDIDLFEVEDTIGQQLEFLTTKSRLALYNLLAYV 60
           MSE+ K++L+ IL +L+CHFTWNL KED    ++ED +  Q+EFL T+ +  +YNLLAY+
Sbjct: 1   MSEVTKNSLEKILPQLKCHFTWNLFKEDSVSRDLEDRVCNQIEFLNTEFKATMYNLLAYI 60

Query: 61  KHLKGQNKDALECLEQAEEIIQQEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKI 120
           KHL G N+ ALECL QAEE+IQQEH+D+ E+RSLVTWGNYAWVYYH+ +L +AQ Y  K+
Sbjct: 61  KHLDGNNEAALECLRQAEELIQQEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQIYVDKV 120

Query: 121 GNVCKKLSSPSNYKLECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNPEFNIGY 180
              CKK S+P  Y +E  E DCE+GW  LK G    ++AK  FEKALE +P+NPEF+ G 
Sbjct: 121 KQTCKKFSNP--YSIEYSELDCEEGWTQLKCGRN--ERAKVCFEKALEEKPNNPEFSSGL 176

Query: 181 AITVYRLDDSDREGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEE 240
           AI +Y LD+       K FS   L++A+ L+PDN Y+KV L LKLQ ++ EAEGE+++EE
Sbjct: 177 AIAMYHLDNHPE----KQFSTDVLKQAIELSPDNQYVKVLLGLKLQKMNKEAEGEQFVEE 232

Query: 241 ILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQI 300
            L++   Q  VLR AAKFYRRK   +KA+EL ++ LE TP + +L+HQ+G CY+A++ Q+
Sbjct: 233 ALEKSPCQTDVLRSAAKFYRRKGDLDKAIELFQRVLESTPNNGYLYHQIGCCYKAKVRQM 292

Query: 301 KKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDI 360
           +    +   G +K  ++ L   A+ +   A+E+      AY+DLA  + E   Y      
Sbjct: 293 QNTGESEASG-NKEMIEALKQYAMDYSNKALEKGLNPLNAYSDLAE-FLETECYQTP--- 347

Query: 361 FRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSAL 420
           F K      + D  K Q H  Y   Q+++ KSE+TA+ H LE L +  +S  + ++    
Sbjct: 348 FNK-----EVPDAEKQQSHQRYCNLQKYNGKSEDTAVQHGLEGLSISKKSTDKEEIKDQP 402

Query: 421 KKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEK 460
           + +S   L  NA +   L   G ++K  G+  QAA+ YEK
Sbjct: 403 QNVSENLLPQNAPNYWYLQ--GLIHKQNGDLLQAAKCYEK 440


>gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens]
          Length = 1036

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 62/261 (23%), Positives = 104/261 (39%), Gaps = 39/261 (14%)

Query: 154 KYYQKAKAAFEKALEVEPDNPEFNIGYAITVYRLDDSDREGSVKSFSLGPLRKAVTLNPD 213
           + + +A AA+ +AL + P++   +   A   Y       E  +   ++   R+A+ L P 
Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYY-------EQGLIDLAIDTYRRAIELQPH 281

Query: 214 NSYIKVFLALKLQDVHAEAEGEKYIEEILDQISSQPYVLRYAAKFYRRKNSWNKALELLK 273
                  LA  L++  + AE E      L    +    L   A   R + +  +A+ L +
Sbjct: 282 FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYR 341

Query: 274 KALEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGKDKLKVDELISSAIFHFKAAMER 333
           KALEV P  +  H  +     A ++Q         +GK        +  A+ H+K A+  
Sbjct: 342 KALEVFPEFAAAHSNL-----ASVLQ--------QQGK--------LQEALMHYKEAIRI 380

Query: 334 DSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLE-NITDDHKH--QIHYHYGRFQEFHR 390
              FA AY+++ N   E      A   + +A+++     D H +   IH   G   E   
Sbjct: 381 SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPE--- 437

Query: 391 KSENTAIHHYLEALKVKDRSP 411
                AI  Y  ALK+K   P
Sbjct: 438 -----AIASYRTALKLKPDFP 453



 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 21/165 (12%)

Query: 326 HFKA-AMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLENITDDHKHQIHYHYGR 384
           HF   A++++ + A AY++L N+Y E GQ   A + +R ALRL+    D    +      
Sbjct: 66  HFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVA 125

Query: 385 FQEFHRKSENTAIHHYLEALKVKD-----RSPLRTKLTSALKKLSTKRLCH-NALDVQ-- 436
             +        A+  Y+ AL+        RS L   L  AL +L   + C+  A++ Q  
Sbjct: 126 AGDMEG-----AVQAYVSALQYNPDLYCVRSDLGN-LLKALGRLEEAKACYLKAIETQPN 179

Query: 437 ---SLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFLTALCEL 478
              + S LG V+  +GE   A  ++EKA  +DP    FL A   L
Sbjct: 180 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP---NFLDAYINL 221


>gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens]
          Length = 1046

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 62/261 (23%), Positives = 104/261 (39%), Gaps = 39/261 (14%)

Query: 154 KYYQKAKAAFEKALEVEPDNPEFNIGYAITVYRLDDSDREGSVKSFSLGPLRKAVTLNPD 213
           + + +A AA+ +AL + P++   +   A   Y       E  +   ++   R+A+ L P 
Sbjct: 239 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYY-------EQGLIDLAIDTYRRAIELQPH 291

Query: 214 NSYIKVFLALKLQDVHAEAEGEKYIEEILDQISSQPYVLRYAAKFYRRKNSWNKALELLK 273
                  LA  L++  + AE E      L    +    L   A   R + +  +A+ L +
Sbjct: 292 FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYR 351

Query: 274 KALEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGKDKLKVDELISSAIFHFKAAMER 333
           KALEV P  +  H  +     A ++Q         +GK        +  A+ H+K A+  
Sbjct: 352 KALEVFPEFAAAHSNL-----ASVLQ--------QQGK--------LQEALMHYKEAIRI 390

Query: 334 DSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLE-NITDDHKH--QIHYHYGRFQEFHR 390
              FA AY+++ N   E      A   + +A+++     D H +   IH   G   E   
Sbjct: 391 SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPE--- 447

Query: 391 KSENTAIHHYLEALKVKDRSP 411
                AI  Y  ALK+K   P
Sbjct: 448 -----AIASYRTALKLKPDFP 463



 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 21/165 (12%)

Query: 326 HFKA-AMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLENITDDHKHQIHYHYGR 384
           HF   A++++ + A AY++L N+Y E GQ   A + +R ALRL+    D    +      
Sbjct: 76  HFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVA 135

Query: 385 FQEFHRKSENTAIHHYLEALKVKD-----RSPLRTKLTSALKKLSTKRLCH-NALDVQ-- 436
             +        A+  Y+ AL+        RS L   L  AL +L   + C+  A++ Q  
Sbjct: 136 AGDMEG-----AVQAYVSALQYNPDLYCVRSDLGN-LLKALGRLEEAKACYLKAIETQPN 189

Query: 437 ---SLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFLTALCEL 478
              + S LG V+  +GE   A  ++EKA  +DP    FL A   L
Sbjct: 190 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP---NFLDAYINL 231


>gi|83415184 transmembrane and tetratricopeptide repeat containing 1
           [Homo sapiens]
          Length = 774

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 14/174 (8%)

Query: 314 LKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLENITDD 373
           LK  E    AI   K +++    FA AY+ LA++ AE  ++  AE+I++  ++  N  D 
Sbjct: 450 LKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIK--NCPD- 506

Query: 374 HKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPL---------RTKLTSALKKLS 424
               +H +YG F       E  A+ HY +A+K+     +         R+   +++ +  
Sbjct: 507 -SSDLHNNYGVFLVDTGLPEK-AVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEW 564

Query: 425 TKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFLTALCEL 478
            KR    A   + LS LG +Y   G   +A + Y++A  + P   E   AL ++
Sbjct: 565 YKRALQVAHKAEILSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQV 618



 Score = 39.7 bits (91), Expect = 0.006
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 12/128 (9%)

Query: 358 EDIFRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDR--SPLRTK 415
           E +FR  ++    T  H  ++HY+Y  F +   +++  AI+HY  ALK+  R  S L   
Sbjct: 361 ESLFRSGVQ----TLPHNAKVHYNYANFLKDQGRNKE-AIYHYRTALKLYPRHASALNNL 415

Query: 416 LTSALKKLSTKRLCHNALDV-----QSLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAE 470
            T        K     AL +     ++L  LG + K + +K +A    + + K  PE A+
Sbjct: 416 GTLTRDTAEAKMYYQRALQLHPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFAD 475

Query: 471 FLTALCEL 478
             ++L  L
Sbjct: 476 AYSSLASL 483



 Score = 38.5 bits (88), Expect = 0.014
 Identities = 33/163 (20%), Positives = 72/163 (44%), Gaps = 17/163 (10%)

Query: 205 RKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEEILDQISSQPYVLRYAAKFYRRKNS 264
           ++A  L P    +++ LA  L  +    E EK    I+ + +      R  +  Y ++ +
Sbjct: 599 QEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQEN 658

Query: 265 WNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGKDKLKVDELISSAI 324
            +KAL+ + KAL++ P    +  ++                   KG ++L+   L+  A 
Sbjct: 659 HDKALDAIDKALQLKPKDPKVISELFF----------------TKG-NQLREQNLLDKAF 701

Query: 325 FHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRL 367
             ++ A++ +   A A+ ++  +    G+Y +A   + +AL+L
Sbjct: 702 ESYRVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYERALQL 744


>gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
           protein) [Homo sapiens]
          Length = 543

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 9/187 (4%)

Query: 301 KKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDI 360
           K+A   +  G D  K  +   +A+ H+  A E D       T+ A +Y E G Y+   ++
Sbjct: 223 KQALKEKELGNDAYKKKDF-DTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCREL 281

Query: 361 FRKALRLENITDDHKHQIHYHYGRFQEFHRKSE--NTAIHHYLEALKVKDRSPLRTKLTS 418
             KA+ +     +   QI   Y R    + K E    AIH Y ++L  + R+P   K   
Sbjct: 282 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSL-AEHRTPDVLKKCQ 340

Query: 419 ALKKL--STKRLCHNALDVQ-SLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFLT-- 473
             +K+    +RL +   D+       G     +G+  QA ++Y +A K +P++A+  +  
Sbjct: 341 QAEKILKEQERLAYINPDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNR 400

Query: 474 ALCELRL 480
           A C  +L
Sbjct: 401 AACYTKL 407


>gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo
           sapiens]
          Length = 860

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 61/276 (22%), Positives = 101/276 (36%), Gaps = 29/276 (10%)

Query: 117 TGKIGNVCKKLSSPSNYKL--ECPETDCEKGWALLKFGGKYYQKAKAAFEKALEVEPDNP 174
           T KI +  K ++    +    +   T+ E   A +  G   Y +A   F   L+ EPD  
Sbjct: 118 TEKILSQAKSIAEQKRFPFATDNDSTNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLV 177

Query: 175 EFNIGYAITVYRLDDSDREGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEG 234
               G  I   +    D + +    +L  L + +TL PD   +    A  L  +    E 
Sbjct: 178 SAIYGRGIAYGKKGLHDIKNA--ELALFELSRVITLEPDRPEVFEQRAEILSPLGRINEA 235

Query: 235 EKYIEEILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYR 294
              + + + Q+     + R+    Y     +  A E  +++LE+           GL + 
Sbjct: 236 VNDLTKAI-QLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294

Query: 295 AQMIQIKKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQY 354
            +                      L+  AI  FK A+++   F  AY  L   Y E G +
Sbjct: 295 HR---------------------GLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNF 333

Query: 355 SNAEDIFRKALRLEN---ITDDHKHQIHYHYGRFQE 387
             A + F+KAL L      T   +  + YH+G  QE
Sbjct: 334 EAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQE 369


>gi|28558993 intraflagellar transport 88 homolog isoform 1 [Homo
           sapiens]
          Length = 833

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 79/347 (22%), Positives = 139/347 (40%), Gaps = 41/347 (11%)

Query: 156 YQKAKAAFEKALEVEPDNPEFNIGYAITVYRLDDSDREGSVKSFS---LGPLR----KAV 208
           Y  A  ++E  + + P+      GY +T+      DRE   K+F      PL     K +
Sbjct: 297 YSDAINSYEHIMSMAPN---LKAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYI 353

Query: 209 TLNPDNSYIKVFLALK---LQDVHAE--AEGEKYIEEILDQISSQPYVLRYAAKFYRRKN 263
           + + D     V  A+K   L+ +  E  A  EKYI      I+  P +    A  Y    
Sbjct: 354 SPSDDPHTNLVTEAIKNDHLRQMERERKAMAEKYIMTSAKLIA--PVIETSFAAGYDWCV 411

Query: 264 SWNKALELLKKA--LEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGKDKLKVDEL-- 319
              KA + ++ A  LE+    ++L  Q       +++++ +   +R K      +  L  
Sbjct: 412 EVVKASQYVELANDLEINKAVTYLR-QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYY 470

Query: 320 ----ISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLENITDDHK 375
                + A  +   A+  D     A T+  N     G Y  A + +++ALR ++   +  
Sbjct: 471 MGKDFAQASSYADIAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEAL 530

Query: 376 HQIHYHYGR----------FQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSALKKLST 425
           + I   Y +          F + H    N+A   Y    ++ +   L    + A++ L  
Sbjct: 531 YNIGLTYEKLNRLDEALDCFLKLHAILRNSAEVLY----QIANIYELMENPSQAIEWLM- 585

Query: 426 KRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFL 472
           + +     D Q LS LG +Y  EG+K QA +YY ++ +  P N E +
Sbjct: 586 QVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVI 632


>gi|28329439 intraflagellar transport 88 homolog isoform 2 [Homo
           sapiens]
          Length = 824

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 79/347 (22%), Positives = 139/347 (40%), Gaps = 41/347 (11%)

Query: 156 YQKAKAAFEKALEVEPDNPEFNIGYAITVYRLDDSDREGSVKSFS---LGPLR----KAV 208
           Y  A  ++E  + + P+      GY +T+      DRE   K+F      PL     K +
Sbjct: 288 YSDAINSYEHIMSMAPN---LKAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDEDKYI 344

Query: 209 TLNPDNSYIKVFLALK---LQDVHAE--AEGEKYIEEILDQISSQPYVLRYAAKFYRRKN 263
           + + D     V  A+K   L+ +  E  A  EKYI      I+  P +    A  Y    
Sbjct: 345 SPSDDPHTNLVTEAIKNDHLRQMERERKAMAEKYIMTSAKLIA--PVIETSFAAGYDWCV 402

Query: 264 SWNKALELLKKA--LEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGKDKLKVDEL-- 319
              KA + ++ A  LE+    ++L  Q       +++++ +   +R K      +  L  
Sbjct: 403 EVVKASQYVELANDLEINKAVTYLR-QKDYNQAVEILKVLEKKDSRVKSAAATNLSALYY 461

Query: 320 ----ISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLENITDDHK 375
                + A  +   A+  D     A T+  N     G Y  A + +++ALR ++   +  
Sbjct: 462 MGKDFAQASSYADIAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEAL 521

Query: 376 HQIHYHYGR----------FQEFHRKSENTAIHHYLEALKVKDRSPLRTKLTSALKKLST 425
           + I   Y +          F + H    N+A   Y    ++ +   L    + A++ L  
Sbjct: 522 YNIGLTYEKLNRLDEALDCFLKLHAILRNSAEVLY----QIANIYELMENPSQAIEWLM- 576

Query: 426 KRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFL 472
           + +     D Q LS LG +Y  EG+K QA +YY ++ +  P N E +
Sbjct: 577 QVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVI 623


>gi|25952122 Bardet-Biedl syndrome 4 [Homo sapiens]
          Length = 519

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 4/57 (7%)

Query: 430 HNALDVQ----SLSALGFVYKLEGEKRQAAEYYEKAQKIDPENAEFLTALCELRLSI 482
           HNAL++     +   LG ++ LEG+  +A E Y+KA +  PEN E LT L  L L +
Sbjct: 159 HNALNLNRHDLTYIMLGKIHLLEGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQL 215


>gi|170784869 tetratricopeptide repeat domain 13 isoform b [Homo
           sapiens]
          Length = 807

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 17/138 (12%)

Query: 266 NKALELLKKALEVTPTSSFLHHQMGLCYRAQ--------MIQIKKATHNRP-----KGKD 312
           N+A+  L KA+++ P++    H+  L + ++          Q  +   N+P     KG  
Sbjct: 180 NEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLT 239

Query: 313 KLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLEN--- 369
                 L+  AI  FK A+++   F  AY  L   Y E G +  A + F+KAL L     
Sbjct: 240 FFHRG-LLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHV 298

Query: 370 ITDDHKHQIHYHYGRFQE 387
            T   +  + YH+G  QE
Sbjct: 299 QTLQLRGMMLYHHGSLQE 316


>gi|7662078 tetratricopeptide repeat domain 37 [Homo sapiens]
          Length = 1564

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 32/151 (21%)

Query: 340 AYTDLANMYAEGG-------QYSNAEDIFRKALRLENITDDHKHQIHYHYGRFQEFHRKS 392
           +Y DLA ++A           Y  AE  F++AL  +    ++ +Q+   Y    E  RK 
Sbjct: 415 SYPDLAEVHALEALIHFTKKDYLQAEKCFQRALEKDTEVAEYHYQLGLTYWFMGEETRKD 474

Query: 393 ENTAIHHYLEALKVKDRSPLRTKLTSALKKLSTKRLCHNALDVQSLSALGFVYK-LEGEK 451
           +  A+ H+L+A +              L     K  C+          LG  Y+ + G+K
Sbjct: 475 KTKALTHFLKAAR--------------LDTYMGKVFCY----------LGHYYRDVVGDK 510

Query: 452 RQAAEYYEKAQKIDPENAEFLTALCELRLSI 482
            +A   Y KA ++D  +AE   A  +L + +
Sbjct: 511 NRARGCYRKAFELDDTDAESGAAAVDLSVEL 541



 Score = 34.7 bits (78), Expect = 0.20
 Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 17/138 (12%)

Query: 233 EGEKYIEEILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLC 292
           E  K +E++L        V    A  +  K  + +A +  ++ALE     +  H+Q+GL 
Sbjct: 404 EAAKIMEDLLSSYPDLAEVHALEALIHFTKKDYLQAEKCFQRALEKDTEVAEYHYQLGLT 463

Query: 293 YRAQMIQIKKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAE-G 351
           Y     + +         KDK K       A+ HF  A   D+     +  L + Y +  
Sbjct: 464 YWFMGEETR---------KDKTK-------ALTHFLKAARLDTYMGKVFCYLGHYYRDVV 507

Query: 352 GQYSNAEDIFRKALRLEN 369
           G  + A   +RKA  L++
Sbjct: 508 GDKNRARGCYRKAFELDD 525


>gi|189011544 ubiquitously transcribed tetratricopeptide repeat, X
           chromosome [Homo sapiens]
          Length = 1401

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 40/260 (15%)

Query: 145 GWALLKFGGKYYQKAKAAFEKALEVEPD-----NPEFNIGYAITVYRLDDSDREGSVKSF 199
           G  L+ F    +Q A  AF++ L V+P           +G    V    ++D E S+K F
Sbjct: 135 GLGLVYFHYNAFQWAIKAFQEVLYVDPSFCRAKEIHLRLGLMFKV----NTDYESSLKHF 190

Query: 200 SLGPLRKAVTLNP---DNSYIKVFLALKLQDVHAEAEGEKYIEEIL--DQISSQ--PYVL 252
            L      V  NP    N+ I+  +A   +        ++  E++L  + +S+Q    VL
Sbjct: 191 QLA----LVDCNPCTLSNAEIQFHIAHLYETQRKYHSAKEAYEQLLQTENLSAQVKATVL 246

Query: 253 RYAAKFYR-------RKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRA-QMIQIKKAT 304
           +     +        +    + A++ L+K+LE  P S    + +G CY +   +Q    +
Sbjct: 247 QQLGWMHHTVDLLGDKATKESYAIQYLQKSLEADPNSGQSWYFLGRCYSSIGKVQDAFIS 306

Query: 305 HNRPKGKDKLKVDELISSAIFH------------FKAAMERDSMFAFAYTDLANMYAEGG 352
           + +   K +   D   S  + +            +  A++ D   A A+ DL  +Y    
Sbjct: 307 YRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCN 366

Query: 353 QYSNAEDIFRKALRLENITD 372
           Q  +A   +  A R ++ ++
Sbjct: 367 QPQDAIKCYLNATRSKSCSN 386


>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
          Length = 2481

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 19/129 (14%)

Query: 340 AYTDLANMYAEGGQYSNAEDIFRKALRLENITDDHKHQIHYHYGRFQEFHRK-SENTAIH 398
           AY ++ N Y   G Y  A    R+ L++    +D   Q   H      +    + + A+ 
Sbjct: 516 AYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQ 575

Query: 399 HYLEALKVKDRSPLRTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEYY 458
           HY   L +                   + L     + ++LS LG  +   GE  QAA YY
Sbjct: 576 HYQNHLNI------------------ARELRDIQSEARALSNLGNFHCSRGEYVQAAPYY 617

Query: 459 EKAQKIDPE 467
           E+  ++ P+
Sbjct: 618 EQYLRLAPD 626


>gi|167466177 cell division cycle protein 27 isoform 1 [Homo
           sapiens]
          Length = 830

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 40/243 (16%)

Query: 239 EEILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMI 298
           +++ D   + P     A   +  +   + A++  ++A++V P  ++ +  +G        
Sbjct: 563 KDLTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLG-------- 614

Query: 299 QIKKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAE 358
                         +  + E +  A+  F+ A+  +     A+  L  +Y +  ++S AE
Sbjct: 615 -------------HEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSLAE 661

Query: 359 DIFRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPL------ 412
             F+KAL +    +     +  H G  Q   +KSE  A+    +A+ +  ++PL      
Sbjct: 662 MHFQKALDI----NPQSSVLLCHIGVVQHALKKSEK-ALDTLNKAIVIDPKNPLCKFHRA 716

Query: 413 -----RTKLTSALKKLST-KRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDP 466
                  K  SAL++L   K++      V  L  +G VYK  G+   A   +  A  +DP
Sbjct: 717 SVLFANEKYKSALQELEELKQIVPKESLVYFL--IGKVYKKLGQTHLALMNFSWAMDLDP 774

Query: 467 ENA 469
           + A
Sbjct: 775 KGA 777


>gi|167466175 cell division cycle protein 27 isoform 2 [Homo
           sapiens]
          Length = 824

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 40/243 (16%)

Query: 239 EEILDQISSQPYVLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMI 298
           +++ D   + P     A   +  +   + A++  ++A++V P  ++ +  +G        
Sbjct: 557 KDLTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLG-------- 608

Query: 299 QIKKATHNRPKGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAE 358
                         +  + E +  A+  F+ A+  +     A+  L  +Y +  ++S AE
Sbjct: 609 -------------HEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSLAE 655

Query: 359 DIFRKALRLENITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPL------ 412
             F+KAL +    +     +  H G  Q   +KSE  A+    +A+ +  ++PL      
Sbjct: 656 MHFQKALDI----NPQSSVLLCHIGVVQHALKKSEK-ALDTLNKAIVIDPKNPLCKFHRA 710

Query: 413 -----RTKLTSALKKLST-KRLCHNALDVQSLSALGFVYKLEGEKRQAAEYYEKAQKIDP 466
                  K  SAL++L   K++      V  L  +G VYK  G+   A   +  A  +DP
Sbjct: 711 SVLFANEKYKSALQELEELKQIVPKESLVYFL--IGKVYKKLGQTHLALMNFSWAMDLDP 768

Query: 467 ENA 469
           + A
Sbjct: 769 KGA 771


>gi|239741018 PREDICTED: hypothetical protein XP_002342056 [Homo
           sapiens]
          Length = 566

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 34/215 (15%)

Query: 163 FEKALEVEPDNPEFNIGYAITVYRLDDSDR--EGSVKSFSLGP---LRKAVTLNPDN--- 214
           F   L  EP N +   G A+    LD      +  V +  LGP   + +  +L P+    
Sbjct: 201 FNTVLRAEPGNVQALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVPELRSLKPEAQAL 260

Query: 215 ------SYIKVFLALKLQDVHA-----EAEGEKYIEEILDQISS-QPYVLRYAAKFYRRK 262
                 S+ +  L+ +L D  A     + +G   + E L +I S QP+     A     +
Sbjct: 261 ITQGLYSHCRALLS-QLPDTGAPLEDKDTQGLLAVGEALIKIDSGQPHWHLLLADILMAQ 319

Query: 263 NSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGKDKL----KVDE 318
            S+ +A   L+KAL   PTS     ++GL      +Q+KK   + P     L    +VD 
Sbjct: 320 GSYEEAGTHLEKALHRAPTSEAARARLGL------LQLKKG--DVPGAARDLQSLAEVDA 371

Query: 319 LISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQ 353
              S + H   A ER S+ A A    A    + GQ
Sbjct: 372 PDLSCLLHLLEASERQSL-AQAAAQEAGTLLDAGQ 405


>gi|4557269 adenylosuccinate lyase isoform a [Homo sapiens]
          Length = 484

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 10/109 (9%)

Query: 34  VEDTIGQQLEFLTTKSRLALYNLLAYVKHLKGQNKDALECL----EQAEEIIQQEHSDKE 89
           +E  I Q+L F+ T+      N++  +    G  +D  E +    +QA  +++QE  D +
Sbjct: 369 IERRIRQELPFMATE------NIIMAMVKAGGSRQDCHEKIRVLSQQAASVVKQEGGDND 422

Query: 90  EVRSLVTWGNYAWVYYHMDQLEEAQKYTGKIGNVCKKLSSPSNYKLECP 138
            +  +     ++ ++  +D L +   +TG+     ++      Y L  P
Sbjct: 423 LIERIQVDAYFSPIHSQLDHLLDPSSFTGRASQQVQRFLEEEVYPLLKP 471


>gi|54607135 translocase of outer mitochondrial membrane 70 homolog
           A [Homo sapiens]
          Length = 608

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 24/200 (12%)

Query: 103 VYYH-------MDQLEEAQKYTGKIGNVCKKLSSPSNYKLECPETDCEKGWALLK--FGG 153
           VY+H       +DQ+EEA     +    C +L      + E      +K +AL +  + G
Sbjct: 403 VYHHRGQLKILLDQVEEAVADFDE----CIRL------RPESALAQAQKCFALYRQAYTG 452

Query: 154 KYYQKAKAAFEKALEVEPDNPEFNIGYAITVYRLDDSDREGSVKSFSLGPLRKAVTLNPD 213
               + +AA +   EV    P    GYA+    L D  + G           K + L PD
Sbjct: 453 NNSSQIQAAMKGFEEVIKKFPRCAEGYALYAQALTDQQQFGKADEM----YDKCIDLEPD 508

Query: 214 NSYIKVFLAL-KLQDVHAEAEGEKYIEEILDQISSQPYVLRYAAKFYRRKNSWNKALELL 272
           N+   V   L +LQ       G + I + ++  +   +          ++ +  KA+++ 
Sbjct: 509 NATTYVHKGLLQLQWKQDLDRGLELISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMF 568

Query: 273 KKALEVTPTSSFLHHQMGLC 292
            KA+ +  +   + H   LC
Sbjct: 569 NKAINLAKSEMEMAHLYSLC 588



 Score = 32.3 bits (72), Expect = 0.98
 Identities = 51/236 (21%), Positives = 90/236 (38%), Gaps = 45/236 (19%)

Query: 147 ALLKFGGKYYQKAKAA-----FEKALEVEPDNPEFNIGYAITVYRLDDSDREGSVKSFSL 201
           AL+K G  Y Q+ +       F  A +++P N +           LD    E +V  F  
Sbjct: 369 ALIKRGSMYMQQQQPLLSTQDFNMAADIDPQNADVYHHRGQLKILLDQV--EEAVADFD- 425

Query: 202 GPLRKAVTLNPDNS----------YIKVFLALKLQDVHAEAEGEKYIEEILDQISSQPYV 251
               + + L P+++          Y + +       + A  +G    EE++ +       
Sbjct: 426 ----ECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKG---FEEVIKKFPRCAEG 478

Query: 252 LRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGK 311
               A+    +  + KA E+  K +++ P ++  +   GL      +Q K+         
Sbjct: 479 YALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLL----QLQWKQ--------- 525

Query: 312 DKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRL 367
           D  +  ELIS AI       E D+   FAY  +  +  + G    A D+F KA+ L
Sbjct: 526 DLDRGLELISKAI-------EIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINL 574


>gi|22749211 transmembrane and tetratricopeptide repeat containing 2
           [Homo sapiens]
          Length = 836

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 34/248 (13%)

Query: 251 VLRYAAKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKATHN---- 306
           ++ Y  K   R   W     L +  ++V P  ++ +    L  ++++ + + A  N    
Sbjct: 463 IVFYGLKTAIRNGDWQNEEMLYRSGIKVNPAKAWGNLGNVLKSQSKISEAESAYRNALYY 522

Query: 307 RPKGKDKL-------KVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAED 359
           R    D L       + +   + A+ ++K A+      A AY +   +    G+   A  
Sbjct: 523 RSNMADMLYNLGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGRTEEARR 582

Query: 360 IFRKALRL--ENITDDHKHQIH-----YHYGRFQEFHRKSE-NTAIHHYLEALKVKDRS- 410
            F K   +  EN+ D H H+       Y+ G+   +H +     A+  Y EA++   R  
Sbjct: 583 TFLKCSEIPDENLKDPHAHKSSVTSCLYNLGKL--YHEQGHYEEALSVYKEAIQKMPRQF 640

Query: 411 ---PLRTKLTSALKKLST---------KRLCHNALDVQSLSALGFVYKLEGEKRQAAEYY 458
               L   +  A  +LS          + L      + +    G +  L G K +A + +
Sbjct: 641 APQSLYNMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKLF 700

Query: 459 EKAQKIDP 466
            KA ++DP
Sbjct: 701 LKAIELDP 708


>gi|144446030 lymphocyte antigen 75 [Homo sapiens]
          Length = 1722

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 309 KGKDKLKVDELISSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLE 368
           K  ++L++    SSA+  +K   E  S++  A   LA     G   SNA D+++K    E
Sbjct: 90  KSVNELRMFSCDSSAMLWWKC--EHHSLYGAARYRLALKDGHGTAISNASDVWKKGGSEE 147

Query: 369 NITDDHKHQIHYH----YGRFQEF 388
           ++ D   H+I+      YGR  EF
Sbjct: 148 SLCDQPYHEIYTRDGNSYGRPCEF 171


>gi|225735593 RNA polymerase II associated protein 3 isoform 2 [Homo
           sapiens]
          Length = 631

 Score = 32.3 bits (72), Expect = 0.98
 Identities = 40/208 (19%), Positives = 86/208 (41%), Gaps = 30/208 (14%)

Query: 83  QEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKIGNVCKKLSSPSNYKLECPETDC 142
           +E + K  ++S   +   AW    +D++ +      K  +  + LS  S  + +    D 
Sbjct: 77  REENTKNRIKS---YDYEAWAKLDVDRILDE---LDKDDSTHESLSQESESEEDGIHVDS 130

Query: 143 EKGWALLKFGGKYYQKAKA-----AFEKALEVEPDNPEFNIGYAITVYRLDDSDREGSVK 197
           +K   L + G KY+++ K       + K ++ +P NP      A   +RL         K
Sbjct: 131 QKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRL---------K 181

Query: 198 SFSLGPLRKAVTLNPDNSYIKV--------FLALKLQDVHAEAEGEKYIEEILDQISSQP 249
            F++      + +  + SY K         F   KL++  A+ + E+ +E   +   +  
Sbjct: 182 KFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEE--AKKDYERVLELEPNNFEATN 239

Query: 250 YVLRYAAKFYRRKNSWNKALELLKKALE 277
            + + +     ++NS+ K  +++ K+ E
Sbjct: 240 ELRKISQALASKENSYPKEADIVIKSTE 267



 Score = 29.6 bits (65), Expect = 6.4
 Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 33/159 (20%)

Query: 47  TKSRLALYNLLAYVKHLKGQNKDALECLEQAEEIIQQE--------HSDKEEVRSLVTWG 98
           TK+R+  Y+  A+ K    +  D L+  +   E + QE        H D ++   L   G
Sbjct: 81  TKNRIKSYDYEAWAKLDVDRILDELDKDDSTHESLSQESESEEDGIHVDSQKALVLKEKG 140

Query: 99  NYAWVYYHMDQLEEA-QKYTGKIG----NVCKKLSSPSNY----KLECPETDCEKGWALL 149
           N    Y+   + +EA   YT  +     N     +  S Y    K    E+DC    AL 
Sbjct: 141 NK---YFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALN 197

Query: 150 KFGGKYY-------------QKAKAAFEKALEVEPDNPE 175
           +   K Y             ++AK  +E+ LE+EP+N E
Sbjct: 198 RSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFE 236


>gi|225735591 RNA polymerase II associated protein 3 isoform 1 [Homo
           sapiens]
          Length = 665

 Score = 32.3 bits (72), Expect = 0.98
 Identities = 40/208 (19%), Positives = 86/208 (41%), Gaps = 30/208 (14%)

Query: 83  QEHSDKEEVRSLVTWGNYAWVYYHMDQLEEAQKYTGKIGNVCKKLSSPSNYKLECPETDC 142
           +E + K  ++S   +   AW    +D++ +      K  +  + LS  S  + +    D 
Sbjct: 77  REENTKNRIKS---YDYEAWAKLDVDRILDE---LDKDDSTHESLSQESESEEDGIHVDS 130

Query: 143 EKGWALLKFGGKYYQKAKA-----AFEKALEVEPDNPEFNIGYAITVYRLDDSDREGSVK 197
           +K   L + G KY+++ K       + K ++ +P NP      A   +RL         K
Sbjct: 131 QKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRL---------K 181

Query: 198 SFSLGPLRKAVTLNPDNSYIKV--------FLALKLQDVHAEAEGEKYIEEILDQISSQP 249
            F++      + +  + SY K         F   KL++  A+ + E+ +E   +   +  
Sbjct: 182 KFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEE--AKKDYERVLELEPNNFEATN 239

Query: 250 YVLRYAAKFYRRKNSWNKALELLKKALE 277
            + + +     ++NS+ K  +++ K+ E
Sbjct: 240 ELRKISQALASKENSYPKEADIVIKSTE 267



 Score = 29.6 bits (65), Expect = 6.4
 Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 33/159 (20%)

Query: 47  TKSRLALYNLLAYVKHLKGQNKDALECLEQAEEIIQQE--------HSDKEEVRSLVTWG 98
           TK+R+  Y+  A+ K    +  D L+  +   E + QE        H D ++   L   G
Sbjct: 81  TKNRIKSYDYEAWAKLDVDRILDELDKDDSTHESLSQESESEEDGIHVDSQKALVLKEKG 140

Query: 99  NYAWVYYHMDQLEEA-QKYTGKIG----NVCKKLSSPSNY----KLECPETDCEKGWALL 149
           N    Y+   + +EA   YT  +     N     +  S Y    K    E+DC    AL 
Sbjct: 141 NK---YFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALN 197

Query: 150 KFGGKYY-------------QKAKAAFEKALEVEPDNPE 175
           +   K Y             ++AK  +E+ LE+EP+N E
Sbjct: 198 RSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFE 236


>gi|52630440 FK506-binding protein 8 [Homo sapiens]
          Length = 413

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 29/165 (17%)

Query: 256 AKFYRRKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGKDKLK 315
           A F    NS++ A++ +  + +V  T             AQ++Q+K    N      +LK
Sbjct: 236 ADFVLAANSYDLAIKAITSSAKVDMTFE---------EEAQLLQLKVKCLNN-LAASQLK 285

Query: 316 VDELISSAIFHFKAAMERDSMFAFAYTD-------LANMYAEGGQYSNAEDIFRKALRLE 368
           +D        H++AA+   S+      D          + A+ G+YS A  I R AL+LE
Sbjct: 286 LD--------HYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLE 337

Query: 369 NITDDHKHQIHYHYGRFQEFHRKSENTAIHHYLEALKVKDRSPLR 413
                    IH    +  + H    +T    Y + L    R P +
Sbjct: 338 ----PSNKTIHAELSKLVKKHAAQRSTETALYRKMLGNPSRLPAK 378


>gi|28603842 tetratricopeptide repeat domain 9C [Homo sapiens]
          Length = 171

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 9/106 (8%)

Query: 135 LECPETDCEKGWA--LLKFGGKYYQKAKAAFEKALEVEPDNPEFNIGYAITVYRLDDSDR 192
           L   +TDC    A  LL+     Y++ +   +K LE +PDN +      +  + L D D+
Sbjct: 67  LHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFHLQDYDQ 126

Query: 193 EGSVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYI 238
                      L  AV   P ++ ++ +L L   ++ +    EK +
Sbjct: 127 ARHY-------LLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQL 165


>gi|118766328 transmembrane and tetratricopeptide repeat containing
           4 isoform 2 [Homo sapiens]
          Length = 741

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 21/108 (19%)

Query: 261 RKNSWNKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQIKKATHNRPKGKDKLKVDELI 320
           R   W    +L + AL V P ++ +H+ +G              +   KG          
Sbjct: 460 RSGEWRSEEQLFRSALSVCPLNAKVHYNIG-------------KNLADKGNQ-------- 498

Query: 321 SSAIFHFKAAMERDSMFAFAYTDLANMYAEGGQYSNAEDIFRKALRLE 368
           ++AI +++ A+  +  +  A  +L N+  E  +   AE++   A++++
Sbjct: 499 TAAIRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ 546


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,779,039
Number of Sequences: 37866
Number of extensions: 698736
Number of successful extensions: 2398
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 2226
Number of HSP's gapped (non-prelim): 164
length of query: 482
length of database: 18,247,518
effective HSP length: 106
effective length of query: 376
effective length of database: 14,233,722
effective search space: 5351879472
effective search space used: 5351879472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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