Guide to the Human Genome
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Name: LY75 Sequence: fasta or formatted (1722aa) NCBI GI: 144446030
Description:

lymphocyte antigen 75

Referenced in:

Fibronectin Family
Lectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         84           2
 C cysteine            3.7         64           2
 D aspartate           5.7         99           2
 E glutamate           6.5        112           3
 F phenylalanine       4.5         78           2
 G glycine             5.9        102           2
 H histidine           3.1         54           2
 I isoleucine          4.8         83           2
 K lysine              7.0        120           2
 L leucine             8.4        145           2
 M methionine          1.5         25           1
 N asparagine          4.9         85           3
 P proline             4.6         79           2
 Q glutamine           3.5         60           2
 R arginine            4.0         69           3
 S serine              8.7        149           2
 T threonine           5.3         91           2
 V valine              4.9         84           3
 W tryptophan          4.2         73           2
 Y tyrosine            3.8         66           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lymphocyte antigen 75 
PLA2R1                0.214   phospholipase A2 receptor 1 isoform 1 precursor [Hom...
PLA2R1                0.209   phospholipase A2 receptor 1 isoform 2 precursor [Hom...
MRC2                  0.197   mannose receptor, C type 2 
MRC1L1                0.139   mannose receptor, C type 1-like 1 
MRC1                  0.139   mannose receptor C type 1 precursor 
CD302                 0.016   CD302 molecule 
NCAN                  0.016   chondroitin sulfate proteoglycan 3 
BCAN                  0.014   brevican isoform 1 
ACAN                  0.012   aggrecan isoform 2 precursor 
ACAN                  0.012   aggrecan isoform 1 precursor 
VCAN                  0.011   versican isoform 2 
VCAN                  0.011   versican isoform 1 
REG1A                 0.011   regenerating islet-derived 1 alpha precursor 
REG1B                 0.011   regenerating islet-derived 1 beta precursor 
COLEC12               0.011   collectin sub-family member 12 
MMP9                  0.010   matrix metalloproteinase 9 preproprotein 
REG4                  0.010   regenerating islet-derived family, member 4 isoform...
REG4                  0.010   regenerating islet-derived family, member 4 isoform ...
CLEC4G                0.010   C-type lectin domain family 4, member G 
CLEC10A               0.010   C-type lectin, superfamily member 14 isoform 1 [Homo...
CLEC10A               0.010   C-type lectin, superfamily member 14 isoform 2 [Homo...
FCER2                 0.010   Fc fragment of IgE, low affinity II, receptor for (C...
CLEC6A                0.010   dectin-2 
CLEC4E                0.009   C-type lectin domain family 4, member E 
CD209                 0.009   CD209 molecule isoform 8 
CLEC4M                0.009   C-type lectin domain family 4, member M isoform 9 [...
CLEC4M                0.009   C-type lectin domain family 4, member M isoform 12 ...
CLEC4M                0.009   C-type lectin domain family 4, member M isoform 2 [...
CD209                 0.009   CD209 molecule isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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