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Search of human proteins with 6912586
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6912586 6-phosphogluconolactonase [Homo sapiens]
(258 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6912586 6-phosphogluconolactonase [Homo sapiens] 511 e-145
gi|52145310 hexose-6-phosphate dehydrogenase precursor [Homo sap... 99 4e-21
gi|13027378 glucosamine-6-phosphate deaminase 1 [Homo sapiens] 40 0.002
gi|19923881 glucosamine-6-phosphate deaminase 2 [Homo sapiens] 39 0.004
gi|19913398 smoothelin isoform a [Homo sapiens] 31 1.2
gi|239756662 PREDICTED: hypothetical protein [Homo sapiens] 30 1.6
gi|169210099 PREDICTED: hypothetical protein [Homo sapiens] 30 1.6
gi|6912446 potassium voltage-gated channel, subfamily H, member ... 30 2.1
gi|239755517 PREDICTED: hypothetical protein [Homo sapiens] 30 2.7
gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate... 29 3.6
gi|217272894 elongation factor Tu GTP binding domain containing ... 29 3.6
gi|217272892 elongation factor Tu GTP binding domain containing ... 29 3.6
gi|54792146 tripartite motif-containing 47 [Homo sapiens] 29 3.6
gi|59933284 RUN domain containing 2B [Homo sapiens] 29 4.6
gi|169203411 PREDICTED: hypothetical protein [Homo sapiens] 28 6.1
gi|169202586 PREDICTED: hypothetical protein [Homo sapiens] 28 6.1
gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [H... 28 7.9
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 28 7.9
gi|148612857 sickle tail isoform 3 [Homo sapiens] 28 7.9
gi|148612813 sickle tail isoform 2 [Homo sapiens] 28 7.9
gi|50843820 sickle tail isoform 1 [Homo sapiens] 28 7.9
gi|156104878 glutaminase [Homo sapiens] 28 7.9
gi|119943100 propionyl Coenzyme A carboxylase, beta polypeptide ... 28 7.9
gi|19913396 smoothelin isoform b [Homo sapiens] 28 7.9
gi|13324688 bromodomain and WD repeat domain containing 2 [Homo ... 28 7.9
gi|19913394 smoothelin isoform c [Homo sapiens] 28 7.9
>gi|6912586 6-phosphogluconolactonase [Homo sapiens]
Length = 258
Score = 511 bits (1317), Expect = e-145
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MAAPAPGLISVFSSSQELGAALAQLVAQRAACCLAGARARFALGLSGGSLVSMLARELPA 60
MAAPAPGLISVFSSSQELGAALAQLVAQRAACCLAGARARFALGLSGGSLVSMLARELPA
Sbjct: 1 MAAPAPGLISVFSSSQELGAALAQLVAQRAACCLAGARARFALGLSGGSLVSMLARELPA 60
Query: 61 AVAPAGPASLARWTLGFCDERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELPVE 120
AVAPAGPASLARWTLGFCDERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELPVE
Sbjct: 61 AVAPAGPASLARWTLGFCDERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELPVE 120
Query: 121 EAAEDYAKKLRQAFQGDSIPVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPK 180
EAAEDYAKKLRQAFQGDSIPVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPK
Sbjct: 121 EAAEDYAKKLRQAFQGDSIPVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPK 180
Query: 181 PPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFL 240
PPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFL
Sbjct: 181 PPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFL 240
Query: 241 DEAAARLLTVPFEKHSTL 258
DEAAARLLTVPFEKHSTL
Sbjct: 241 DEAAARLLTVPFEKHSTL 258
>gi|52145310 hexose-6-phosphate dehydrogenase precursor [Homo
sapiens]
Length = 791
Score = 99.0 bits (245), Expect = 4e-21
Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 40 RFALGLSGGSLVSMLARELPAAVAPAGPASLARWTLGFCDERLVPFDHAESTYGLYRTHL 99
+F L LSGGS L ++L A A W + DER VP ES + + HL
Sbjct: 584 QFHLALSGGSSPVALFQQLATAHYGFPWAHTHLWLV---DERCVPLSDPESNFQGLQAHL 640
Query: 100 LSRLPIPESQV----ITINPELPVEE--AAEDYAKKLRQAFQGDSIPVFDLLILGVGPDG 153
L + IP + + + L EE A+ YA+++ S FDL++LG+G DG
Sbjct: 641 LQHVRIPYYNIHPMPVHLQQRLCAEEDQGAQIYAREISALVANSS---FDLVLLGMGADG 697
Query: 154 HTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLK 213
HT SLFP P + E++V ++ SP P +R++L+LP++N A+ V + G K +
Sbjct: 698 HTASLFPQSPTGLDGEQLVV-LTTSPSQPHRRMSLSLPLINRAKKVAVLVMGRMKREITT 756
Query: 214 RILE-DQEENPLPAALVQPHTGKLCWFLD 241
+ E P + V PH+G+L W++D
Sbjct: 757 LVSRVGHEPKKWPISGVLPHSGQLVWYMD 785
>gi|13027378 glucosamine-6-phosphate deaminase 1 [Homo sapiens]
Length = 289
Score = 40.4 bits (93), Expect = 0.002
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 19/185 (10%)
Query: 83 VPFDHAESTYGLYRTHLLSRLPI-PESQVITINPELPVEEAAEDYAKKLRQAFQGDSIPV 141
+P DH ES + + + I PE+ I + ++ + + +K++ A
Sbjct: 77 LPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDAFEEKIKAAGG------ 130
Query: 142 FDLLILGVGPDGHTCSLFPDHPLL-QEREKIVAPIS----------DSPKPPPQRVTLTL 190
+L + G+GPDGH P L+ + R K +A + + K P +T+ +
Sbjct: 131 IELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTKVPTMALTVGV 190
Query: 191 PVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFLDEAAARLLTV 250
+ AR V+ + TG KA L + +E+ + + Q H + + DE A L V
Sbjct: 191 GTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHP-RTVFVCDEDATLELKV 249
Query: 251 PFEKH 255
K+
Sbjct: 250 KTVKY 254
>gi|19923881 glucosamine-6-phosphate deaminase 2 [Homo sapiens]
Length = 276
Score = 38.9 bits (89), Expect = 0.004
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 19/185 (10%)
Query: 83 VPFDHAESTYGLYRTHLLSRLPI-PESQVITINPELPVEEAAEDYAKKLRQAFQGDSIPV 141
+P +H ES + + + I P + I ++ + + K+++A
Sbjct: 77 LPRNHPESYHSYMWNNFFKHIDIDPNNAHILDGNAADLQAECDAFENKIKEAGG------ 130
Query: 142 FDLLILGVGPDGHTCSLFPDHPLL-QEREKIVAPIS----------DSPKPPPQRVTLTL 190
DL + G+GPDGH P L+ + R K +A + D K P +T+ +
Sbjct: 131 IDLFVGGIGPDGHIAFNEPGSSLVSRTRLKTLAMDTILANAKYFDGDLSKVPTMALTVGV 190
Query: 191 PVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPHTGKLCWFLDEAAARLLTV 250
+ AR V+ + TG KA L + +E+ + + Q H + + DE A L V
Sbjct: 191 GTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHP-RTIFVCDEDATLELRV 249
Query: 251 PFEKH 255
K+
Sbjct: 250 KTVKY 254
>gi|19913398 smoothelin isoform a [Homo sapiens]
Length = 940
Score = 30.8 bits (68), Expect = 1.2
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 22/133 (16%)
Query: 116 ELPVEEAAEDYAK--KLRQAFQGDSIPVFDLLILGVGPDGHTCS-----------LFPDH 162
E+P E E A+ K +G S V + +L P G T S P+
Sbjct: 157 EVPEREEQEQQAEVSKPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASPSSSPTPASPEP 216
Query: 163 PLLQ-EREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEE 221
PL E + + A + SP+PPP T P + T + + EG+ V+ ++L +E
Sbjct: 217 PLEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPT---LPSTEGQ--VVNKLLSGPKE 271
Query: 222 NPLPAALVQPHTG 234
P A PH G
Sbjct: 272 TP---AAQSPHRG 281
>gi|239756662 PREDICTED: hypothetical protein [Homo sapiens]
Length = 418
Score = 30.4 bits (67), Expect = 1.6
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 175 ISDSPKP-PPQRVTLTLPVLNAARTVIFVATG-EGKAAVLKRILEDQEENPLPAALVQPH 232
+ SP P PPQRV + PV + ++ TG EG++ + L D PL H
Sbjct: 322 VHPSPGPAPPQRVRVLAPVFRICSPLPWIGTGTEGQS--VGTCLPDLFTRPLDR---HRH 376
Query: 233 TGKLCWFLDEAA 244
G CW L +
Sbjct: 377 RGSECWHLSSGS 388
Score = 28.1 bits (61), Expect = 7.9
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 175 ISDSPKP-PPQRVTLTLPVLNAARTVIFVATG-EGKAAVLKRILEDQEENPLPAALVQPH 232
+ SP P PPQRV + PV V + T EG++ + L D PL H
Sbjct: 188 VHPSPGPAPPQRVRVLAPVFRICSPVPWTGTATEGQS--VGTCLPDLFTRPLDR---HRH 242
Query: 233 TGKLCWFLDEAA 244
G CW L +
Sbjct: 243 RGSECWHLSSGS 254
>gi|169210099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 413
Score = 30.4 bits (67), Expect = 1.6
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 175 ISDSPKP-PPQRVTLTLPVLNAARTVIFVATG-EGKAAVLKRILEDQEENPLPAALVQPH 232
+ SP P PPQRV + PV + ++ TG EG++ + L D PL H
Sbjct: 317 VHPSPGPAPPQRVRVLAPVFRICSPLPWIGTGTEGQS--VGTCLPDLFTRPLDR---HRH 371
Query: 233 TGKLCWFLDEAA 244
G CW L +
Sbjct: 372 RGSECWHLSSGS 383
Score = 28.1 bits (61), Expect = 7.9
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 175 ISDSPKP-PPQRVTLTLPVLNAARTVIFVATG-EGKAAVLKRILEDQEENPLPAALVQPH 232
+ SP P PPQRV + PV V + T EG++ + L D PL H
Sbjct: 183 VHPSPGPAPPQRVRVLAPVFRICSPVPWTGTATEGQS--VGTCLPDLFTRPLDR---HRH 237
Query: 233 TGKLCWFLDEAA 244
G CW L +
Sbjct: 238 RGSECWHLSSGS 249
>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
[Homo sapiens]
Length = 1017
Score = 30.0 bits (66), Expect = 2.1
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 141 VFDLLILGVGPDGHTC--SLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAART 198
+ LL +GP GH + PD P Q R ++P + +PPP TL ++ +
Sbjct: 904 IMGLLQARLGPPGHPAGSAWTPDPPCPQLRPPCLSPCAS--RPPPSLQDTTLAEVHCPAS 961
Query: 199 VIFVATGEGKAAVLKRILEDQEENPLP 225
V + TG + IL P P
Sbjct: 962 VGTMETGTALLDLRPSILPPYPSEPDP 988
>gi|239755517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 369
Score = 29.6 bits (65), Expect = 2.7
Identities = 29/100 (29%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Query: 19 GAALAQLVAQRAACCLAGARARFALGLSGGSLVSMLARELPAAVAPAGPASLARWTLGFC 78
G A R CC A AL LS S V A PAAV+PA A G+
Sbjct: 172 GTATLVRAGPRLGCCPRKIGAENALVLSEFSSVRQGAGLAPAAVSPALDAG-----EGYG 226
Query: 79 DERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELP 118
DER+ +G + + L +P +P P
Sbjct: 227 DERVKDVQRDSRDFGGHLNSVACCLAVPSLPRAPRSPSRP 266
>gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate
3B [Homo sapiens]
Length = 1043
Score = 29.3 bits (64), Expect = 3.6
Identities = 32/83 (38%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 4 PAP-GLISVFSSSQELGAALAQLVAQRAACCLAGARARFALGLSGGSLVSMLARELPAAV 62
P P G+++ S LGA L RA A ARA A L L+ EL A
Sbjct: 24 PQPCGVLARLGGSVRLGALL-----PRAPLARARARAALARAALAPRLPHNLSLELVVAA 78
Query: 63 APA-GPASLARWTLGFCDERLVP 84
PA PASL R G C + LVP
Sbjct: 79 PPARDPASLTR---GLC-QALVP 97
>gi|217272894 elongation factor Tu GTP binding domain containing 2
isoform b [Homo sapiens]
Length = 937
Score = 29.3 bits (64), Expect = 3.6
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 39 ARFALGLSGGSLVSMLARELPAAVAPAGPASLARWTLGFCDERLVPFDHAESTYGLY--- 95
A+ L GG ++ R + +A A P + + + E P D + Y +
Sbjct: 762 AQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPY---YFVEVQAPADCVSAVYTVLARR 818
Query: 96 RTHLLSRLPIPESQVITINPELPVEEAAEDYAKKLRQAFQGDSIPVFDLLILGVGPDGHT 155
R H+ PIP S + TI +P ++ + LR QG + F L + H
Sbjct: 819 RGHVTQDAPIPGSPLYTIKAFIPAIDSF-GFETDLRTHTQGQA---FSLSVF------HH 868
Query: 156 CSLFPDHPLLQEREKIVAPISDSPKP 181
+ P PL ++ ++ P+ P P
Sbjct: 869 WQIVPGDPL--DKSIVIRPLEPQPAP 892
>gi|217272892 elongation factor Tu GTP binding domain containing 2
isoform a [Homo sapiens]
Length = 972
Score = 29.3 bits (64), Expect = 3.6
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 39 ARFALGLSGGSLVSMLARELPAAVAPAGPASLARWTLGFCDERLVPFDHAESTYGLY--- 95
A+ L GG ++ R + +A A P + + + E P D + Y +
Sbjct: 797 AQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPY---YFVEVQAPADCVSAVYTVLARR 853
Query: 96 RTHLLSRLPIPESQVITINPELPVEEAAEDYAKKLRQAFQGDSIPVFDLLILGVGPDGHT 155
R H+ PIP S + TI +P ++ + LR QG + F L + H
Sbjct: 854 RGHVTQDAPIPGSPLYTIKAFIPAIDSF-GFETDLRTHTQGQA---FSLSVF------HH 903
Query: 156 CSLFPDHPLLQEREKIVAPISDSPKP 181
+ P PL ++ ++ P+ P P
Sbjct: 904 WQIVPGDPL--DKSIVIRPLEPQPAP 927
>gi|54792146 tripartite motif-containing 47 [Homo sapiens]
Length = 638
Score = 29.3 bits (64), Expect = 3.6
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 15/93 (16%)
Query: 177 DSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQ-EENPLPAALVQP---- 231
++P P P T+ + + A R + F A +GK ++L+R+ + +PA+ + P
Sbjct: 537 EAPLPHPFSPTVGVCLEYADRALAFYAVRDGKMSLLRRLKASRPRRGGIPASPIDPFQSR 596
Query: 232 ----------HTGKLCWFLDEAAARLLTVPFEK 254
H K +FL+ A L P +K
Sbjct: 597 LDSHFAGLFTHRLKPAFFLESVDAHLQIGPLKK 629
>gi|59933284 RUN domain containing 2B [Homo sapiens]
Length = 249
Score = 28.9 bits (63), Expect = 4.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 147 LGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGE 206
+ GP+ ++ D+ L + K +SD K Q VTL +V T
Sbjct: 12 MAAGPNSILFAINIDNKDLNGQSKFAPTVSDLLKESTQNVTLLKESTQGVSSVFREITAS 71
Query: 207 GKAAVLKRILEDQEENPLP 225
++L I +QE +PLP
Sbjct: 72 SAISIL--IKPEQETDPLP 88
>gi|169203411 PREDICTED: hypothetical protein [Homo sapiens]
Length = 289
Score = 28.5 bits (62), Expect = 6.1
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 29 RAACCLAGARARFALGLSGGSLVSMLARELPAAVAPAGPASLARWTLGFCDERLVPFDHA 88
R CC A AL LS S V A PAAV+PA A G+ DER+
Sbjct: 102 RLGCCPRKIGAENALVLSEFSSVRQGAGLAPAAVSPALDAG-----EGYGDERVKDVQRD 156
Query: 89 ESTYGLYRTHLLSRLPIPESQVITINPELP 118
+G + + L +P +P P
Sbjct: 157 SRDFGGHLNSVACCLAVPSLPRAPRSPSRP 186
>gi|169202586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 289
Score = 28.5 bits (62), Expect = 6.1
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 29 RAACCLAGARARFALGLSGGSLVSMLARELPAAVAPAGPASLARWTLGFCDERLVPFDHA 88
R CC A AL LS S V A PAAV+PA A G+ DER+
Sbjct: 102 RLGCCPRKIGAENALVLSEFSSVRQGAGLAPAAVSPALDAG-----EGYGDERVKDVQRD 156
Query: 89 ESTYGLYRTHLLSRLPIPESQVITINPELP 118
+G + + L +P +P P
Sbjct: 157 SRDFGGHLNSVACCLAVPSLPRAPRSPSRP 186
>gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 28.1 bits (61), Expect = 7.9
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 5 APGLISVFSSSQELG-AALAQL---VAQRAACCLAGARARFALGLSGGSLVSMLARELPA 60
APG S+ +G AA+A++ V +R AC G R A G+ G + R++
Sbjct: 79 APGCRSLVGRGWGVGWAAVAEVQGTVGERGACAFGGGRGLLAAGVGGAEGGCQVTRKIKR 138
Query: 61 AVAPAGPAS 69
+ G S
Sbjct: 139 GRSKEGGGS 147
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 28.1 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 173 APISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAALVQPH 232
+P+S S KP + ++LP A + +FV T G + +L E P P PH
Sbjct: 3433 SPVSVSMKPD---LPVSLPTQTAPKQPLFVPTTSGPSTPPGLVLPHTEFQPAPKQDSSPH 3489
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 28.1 bits (61), Expect = 7.9
Identities = 20/66 (30%), Positives = 26/66 (39%)
Query: 166 QEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLP 225
Q+ EK+ P PPP+R L L R+ V TG + K ED +P
Sbjct: 1000 QDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQT 1059
Query: 226 AALVQP 231
A P
Sbjct: 1060 RATKYP 1065
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 28.1 bits (61), Expect = 7.9
Identities = 20/66 (30%), Positives = 26/66 (39%)
Query: 166 QEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLP 225
Q+ EK+ P PPP+R L L R+ V TG + K ED +P
Sbjct: 955 QDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQT 1014
Query: 226 AALVQP 231
A P
Sbjct: 1015 RATKYP 1020
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 28.1 bits (61), Expect = 7.9
Identities = 20/66 (30%), Positives = 26/66 (39%)
Query: 166 QEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLP 225
Q+ EK+ P PPP+R L L R+ V TG + K ED +P
Sbjct: 1035 QDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQT 1094
Query: 226 AALVQP 231
A P
Sbjct: 1095 RATKYP 1100
>gi|156104878 glutaminase [Homo sapiens]
Length = 669
Score = 28.1 bits (61), Expect = 7.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 196 ARTVIFVATGEGKAAVLKRILEDQEENPLP 225
+RT + VA EG V+K +LE + NP P
Sbjct: 586 SRTALHVAAAEGHVEVVKFLLEACKVNPFP 615
>gi|119943100 propionyl Coenzyme A carboxylase, beta polypeptide
[Homo sapiens]
Length = 539
Score = 28.1 bits (61), Expect = 7.9
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 187 TLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEENPLPAA-------LVQPHT--GKLC 237
T + V+ A V + G + ++ NP PAA ++QP + ++C
Sbjct: 457 TAEIAVMGAKGAVEIIFKGHENVEAAQAEYIEKFANPFPAAVRGFVDDIIQPSSTRARIC 516
Query: 238 WFLDEAAARLLTVPFEKHSTL 258
LD A++ + P+ KH+ +
Sbjct: 517 CDLDVLASKKVQRPWRKHANI 537
>gi|19913396 smoothelin isoform b [Homo sapiens]
Length = 915
Score = 28.1 bits (61), Expect = 7.9
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 19/122 (15%)
Query: 116 ELPVEEAAEDYAK--KLRQAFQGDSIPVFDLLILGVGPDGHTCS-----------LFPDH 162
E+P E E A+ K +G S V + +L P G T S P+
Sbjct: 157 EVPEREEQEQQAEVSKPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASPSSSPTPASPEP 216
Query: 163 PLLQ-EREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEE 221
PL E + + A + SP+PPP T P + T + + EG+ V+ ++L +E
Sbjct: 217 PLEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPT---LPSTEGQ--VVNKLLSGPKE 271
Query: 222 NP 223
P
Sbjct: 272 TP 273
>gi|13324688 bromodomain and WD repeat domain containing 2 [Homo
sapiens]
Length = 1224
Score = 28.1 bits (61), Expect = 7.9
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 160 PDHPLLQEREKIVAPISDSPKPPP----QRVTLTLPVLNAARTVIFVATGEGKAAVLKRI 215
P H L E IV SP PP ++V ++ P + A + ATG KA +I
Sbjct: 171 PSHLTLLTSEGIVFISDFSPSKPPSGPGKKVYISSPHSSPAHNKLATATGAKKALNKVKI 230
Query: 216 LEDQEE 221
L QE+
Sbjct: 231 LITQEK 236
>gi|19913394 smoothelin isoform c [Homo sapiens]
Length = 917
Score = 28.1 bits (61), Expect = 7.9
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 19/122 (15%)
Query: 116 ELPVEEAAEDYAK--KLRQAFQGDSIPVFDLLILGVGPDGHTCS-----------LFPDH 162
E+P E E A+ K +G S V + +L P G T S P+
Sbjct: 157 EVPEREEQEQQAEVSKPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASPSSSPTPASPEP 216
Query: 163 PLLQ-EREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLKRILEDQEE 221
PL E + + A + SP+PPP T P + T + + EG+ V+ ++L +E
Sbjct: 217 PLEPAEAQCLTAEVPGSPEPPPSPPKTTSPEPQESPT---LPSTEGQ--VVNKLLSGPKE 271
Query: 222 NP 223
P
Sbjct: 272 TP 273
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,932,966
Number of Sequences: 37866
Number of extensions: 526694
Number of successful extensions: 1674
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1663
Number of HSP's gapped (non-prelim): 30
length of query: 258
length of database: 18,247,518
effective HSP length: 100
effective length of query: 158
effective length of database: 14,460,918
effective search space: 2284825044
effective search space used: 2284825044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.