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Search of human proteins with 67551265
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|67551265 transcription factor ELYS [Homo sapiens]
(2266 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|67551265 transcription factor ELYS [Homo sapiens] 4457 0.0
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 62 5e-09
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 62 5e-09
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 62 8e-09
gi|87299628 biorientation of chromosomes in cell division 1-like... 61 1e-08
gi|239753245 PREDICTED: similar to UPF0634 protein C [Homo sapiens] 59 5e-08
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 56 5e-07
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 55 6e-07
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 52 5e-06
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 52 5e-06
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 52 9e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 50 2e-05
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 50 3e-05
gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 50 3e-05
gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] 50 3e-05
gi|110611184 chromodomain helicase DNA binding protein 2 isoform... 50 3e-05
gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH po... 50 3e-05
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 50 3e-05
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 50 3e-05
gi|104526627 triadin [Homo sapiens] 50 3e-05
gi|117676384 splicing factor, arginine/serine-rich 2, interactin... 49 7e-05
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 48 1e-04
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 48 1e-04
gi|71061468 centromere protein E [Homo sapiens] 48 1e-04
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 48 1e-04
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 48 1e-04
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 48 1e-04
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 48 1e-04
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 48 1e-04
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 48 1e-04
>gi|67551265 transcription factor ELYS [Homo sapiens]
Length = 2266
Score = 4457 bits (11559), Expect = 0.0
Identities = 2266/2266 (100%), Positives = 2266/2266 (100%)
Query: 1 MRDLRAQVTSGLLPFPEVTLQALGEDEITLESVLRGKFAAGKNGLACLACGPQLEVVNSI 60
MRDLRAQVTSGLLPFPEVTLQALGEDEITLESVLRGKFAAGKNGLACLACGPQLEVVNSI
Sbjct: 1 MRDLRAQVTSGLLPFPEVTLQALGEDEITLESVLRGKFAAGKNGLACLACGPQLEVVNSI 60
Query: 61 TGERLSAYRFSGVNEQPPVVLAVKEFSWQKRTGLLIGLEETEGSVLCLYDLGISKVVKAV 120
TGERLSAYRFSGVNEQPPVVLAVKEFSWQKRTGLLIGLEETEGSVLCLYDLGISKVVKAV
Sbjct: 61 TGERLSAYRFSGVNEQPPVVLAVKEFSWQKRTGLLIGLEETEGSVLCLYDLGISKVVKAV 120
Query: 121 VLPGRVTAIEPIINHGGASASTQHLHPSLRWLFGVAAVVTDVGQILLVDLCLDDLSCNQN 180
VLPGRVTAIEPIINHGGASASTQHLHPSLRWLFGVAAVVTDVGQILLVDLCLDDLSCNQN
Sbjct: 121 VLPGRVTAIEPIINHGGASASTQHLHPSLRWLFGVAAVVTDVGQILLVDLCLDDLSCNQN 180
Query: 181 EVEASDLEVLTGIPAEVPHIRESVMRQGRHLCFQLVSPTGTAVSTLSYISRTNQLAVGFS 240
EVEASDLEVLTGIPAEVPHIRESVMRQGRHLCFQLVSPTGTAVSTLSYISRTNQLAVGFS
Sbjct: 181 EVEASDLEVLTGIPAEVPHIRESVMRQGRHLCFQLVSPTGTAVSTLSYISRTNQLAVGFS 240
Query: 241 DGYLALWNMKSMKREYYIQLESGQVPVYAVTFQEPENDPRNCCYLWAVQSTQDSEGDVLS 300
DGYLALWNMKSMKREYYIQLESGQVPVYAVTFQEPENDPRNCCYLWAVQSTQDSEGDVLS
Sbjct: 241 DGYLALWNMKSMKREYYIQLESGQVPVYAVTFQEPENDPRNCCYLWAVQSTQDSEGDVLS 300
Query: 301 LHLLQLAFGNRKCLASGQILYEGLEYCEERYTLDLTGGMFPLRGQTSNTKLLGCQSIEKF 360
LHLLQLAFGNRKCLASGQILYEGLEYCEERYTLDLTGGMFPLRGQTSNTKLLGCQSIEKF
Sbjct: 301 LHLLQLAFGNRKCLASGQILYEGLEYCEERYTLDLTGGMFPLRGQTSNTKLLGCQSIEKF 360
Query: 361 RSHGDREEGVNEALSPDTSVSVFTWQVNIYGQGKPSVYLGLFDINRWYHAQMPDSLRSGE 420
RSHGDREEGVNEALSPDTSVSVFTWQVNIYGQGKPSVYLGLFDINRWYHAQMPDSLRSGE
Sbjct: 361 RSHGDREEGVNEALSPDTSVSVFTWQVNIYGQGKPSVYLGLFDINRWYHAQMPDSLRSGE 420
Query: 421 YLHNCSYFALWSLESVVSRTSPHGILDILVHERSLNRGVPPSYPPPEQFFNPSTYNFDAT 480
YLHNCSYFALWSLESVVSRTSPHGILDILVHERSLNRGVPPSYPPPEQFFNPSTYNFDAT
Sbjct: 421 YLHNCSYFALWSLESVVSRTSPHGILDILVHERSLNRGVPPSYPPPEQFFNPSTYNFDAT 480
Query: 481 CLLNSGVVHLTCTGFQKETLTFLKKSGPSLNELIPDGYNRCLVAGLLSPRFVDVQPSSLS 540
CLLNSGVVHLTCTGFQKETLTFLKKSGPSLNELIPDGYNRCLVAGLLSPRFVDVQPSSLS
Sbjct: 481 CLLNSGVVHLTCTGFQKETLTFLKKSGPSLNELIPDGYNRCLVAGLLSPRFVDVQPSSLS 540
Query: 541 QEEQLEAILSAAIQTSSLGLLTGYIRRWITEEQPNSATNLRFVLEWTWNKVVLTKEEFDR 600
QEEQLEAILSAAIQTSSLGLLTGYIRRWITEEQPNSATNLRFVLEWTWNKVVLTKEEFDR
Sbjct: 541 QEEQLEAILSAAIQTSSLGLLTGYIRRWITEEQPNSATNLRFVLEWTWNKVVLTKEEFDR 600
Query: 601 LCVPLFDGSCHFMDPQTIQSIQQCYLLLSNLNIVLSCFASEAREITERGLIDLSNKFVVS 660
LCVPLFDGSCHFMDPQTIQSIQQCYLLLSNLNIVLSCFASEAREITERGLIDLSNKFVVS
Sbjct: 601 LCVPLFDGSCHFMDPQTIQSIQQCYLLLSNLNIVLSCFASEAREITERGLIDLSNKFVVS 660
Query: 661 HLICQYAQVVLWFSHSGLLPEGIDDSVQLSRLCYNYPVIQNYYTSRRQKFERLSRGKWNP 720
HLICQYAQVVLWFSHSGLLPEGIDDSVQLSRLCYNYPVIQNYYTSRRQKFERLSRGKWNP
Sbjct: 661 HLICQYAQVVLWFSHSGLLPEGIDDSVQLSRLCYNYPVIQNYYTSRRQKFERLSRGKWNP 720
Query: 721 DCLMIDGLVSQLGERIEKLWKRDEGGTGKYPPASLHAVLDMYLLDGVTEAAKHSITIYLL 780
DCLMIDGLVSQLGERIEKLWKRDEGGTGKYPPASLHAVLDMYLLDGVTEAAKHSITIYLL
Sbjct: 721 DCLMIDGLVSQLGERIEKLWKRDEGGTGKYPPASLHAVLDMYLLDGVTEAAKHSITIYLL 780
Query: 781 LDIMYSFPNKTDTPIESFPTVFAISWGQVKLIQGFWLIDHNDYESGLDLLFHPATAKPLS 840
LDIMYSFPNKTDTPIESFPTVFAISWGQVKLIQGFWLIDHNDYESGLDLLFHPATAKPLS
Sbjct: 781 LDIMYSFPNKTDTPIESFPTVFAISWGQVKLIQGFWLIDHNDYESGLDLLFHPATAKPLS 840
Query: 841 WQHSKIIQAFMSQGEHRQALRYIQTMKPTVSSGNDVILHLTVLLFNRCMVEAWNFLRQHC 900
WQHSKIIQAFMSQGEHRQALRYIQTMKPTVSSGNDVILHLTVLLFNRCMVEAWNFLRQHC
Sbjct: 841 WQHSKIIQAFMSQGEHRQALRYIQTMKPTVSSGNDVILHLTVLLFNRCMVEAWNFLRQHC 900
Query: 901 NRLNIEELLKHMYEVCQEMGLMEDLLKLPFTDTEQECLVKFLQSSASVQNHEFLLVHHLQ 960
NRLNIEELLKHMYEVCQEMGLMEDLLKLPFTDTEQECLVKFLQSSASVQNHEFLLVHHLQ
Sbjct: 901 NRLNIEELLKHMYEVCQEMGLMEDLLKLPFTDTEQECLVKFLQSSASVQNHEFLLVHHLQ 960
Query: 961 RANYVPALKLNQTLKINVMNDRDPRLRERSLARNSILDQYGKILPRVHRKLAIERAKPYH 1020
RANYVPALKLNQTLKINVMNDRDPRLRERSLARNSILDQYGKILPRVHRKLAIERAKPYH
Sbjct: 961 RANYVPALKLNQTLKINVMNDRDPRLRERSLARNSILDQYGKILPRVHRKLAIERAKPYH 1020
Query: 1021 LSTSSVFRLVSRPKPLSAVPKQVVTGTVLTRSVFINNVLSKIGEVWASKEPINSTTPFNS 1080
LSTSSVFRLVSRPKPLSAVPKQVVTGTVLTRSVFINNVLSKIGEVWASKEPINSTTPFNS
Sbjct: 1021 LSTSSVFRLVSRPKPLSAVPKQVVTGTVLTRSVFINNVLSKIGEVWASKEPINSTTPFNS 1080
Query: 1081 SKIEEPSPIVYSLPAPELPEAFFGTPISKASQKISRLLDLVVQPVPRPSQCSEFIQQSSM 1140
SKIEEPSPIVYSLPAPELPEAFFGTPISKASQKISRLLDLVVQPVPRPSQCSEFIQQSSM
Sbjct: 1081 SKIEEPSPIVYSLPAPELPEAFFGTPISKASQKISRLLDLVVQPVPRPSQCSEFIQQSSM 1140
Query: 1141 KSPLYLVSRSLPSSSQLKGSPQAISRASELHLLETPLVVKKAKSLAMSVTTSGFSEFTPQ 1200
KSPLYLVSRSLPSSSQLKGSPQAISRASELHLLETPLVVKKAKSLAMSVTTSGFSEFTPQ
Sbjct: 1141 KSPLYLVSRSLPSSSQLKGSPQAISRASELHLLETPLVVKKAKSLAMSVTTSGFSEFTPQ 1200
Query: 1201 SILRSTLRSTPLASPSPSPGRSPQRLKETRISFVEEDVHPKWIPGAADDSKLEVFTTPKK 1260
SILRSTLRSTPLASPSPSPGRSPQRLKETRISFVEEDVHPKWIPGAADDSKLEVFTTPKK
Sbjct: 1201 SILRSTLRSTPLASPSPSPGRSPQRLKETRISFVEEDVHPKWIPGAADDSKLEVFTTPKK 1260
Query: 1261 CAVPVETEWLKSKDRTTSFFLNSPEKEHQEMDEGSQSLEKLDVSKGNSSVSITSDETTLE 1320
CAVPVETEWLKSKDRTTSFFLNSPEKEHQEMDEGSQSLEKLDVSKGNSSVSITSDETTLE
Sbjct: 1261 CAVPVETEWLKSKDRTTSFFLNSPEKEHQEMDEGSQSLEKLDVSKGNSSVSITSDETTLE 1320
Query: 1321 YQDAPSPEDLEETVFTASKPKSSSTALTTNVTEQTEKDGDKDVFASEVTPSDLQKQMGNL 1380
YQDAPSPEDLEETVFTASKPKSSSTALTTNVTEQTEKDGDKDVFASEVTPSDLQKQMGNL
Sbjct: 1321 YQDAPSPEDLEETVFTASKPKSSSTALTTNVTEQTEKDGDKDVFASEVTPSDLQKQMGNL 1380
Query: 1381 EDAETKDLLVAAEAFSELNHLSPVQGTEASLCAPSVYEGKIFTQKSKVPVLDEGLTSVET 1440
EDAETKDLLVAAEAFSELNHLSPVQGTEASLCAPSVYEGKIFTQKSKVPVLDEGLTSVET
Sbjct: 1381 EDAETKDLLVAAEAFSELNHLSPVQGTEASLCAPSVYEGKIFTQKSKVPVLDEGLTSVET 1440
Query: 1441 YTPAIRANDNKSMADVLGDGGNSSLTISEGPIVSERRLNQEVALNLKEDHEVEVGVLKES 1500
YTPAIRANDNKSMADVLGDGGNSSLTISEGPIVSERRLNQEVALNLKEDHEVEVGVLKES
Sbjct: 1441 YTPAIRANDNKSMADVLGDGGNSSLTISEGPIVSERRLNQEVALNLKEDHEVEVGVLKES 1500
Query: 1501 VDLPEEKLPISDSPPDTQEIHVIEQEKLEAQDSGEEARNLSFNELYPSGTLKLQYNFDTI 1560
VDLPEEKLPISDSPPDTQEIHVIEQEKLEAQDSGEEARNLSFNELYPSGTLKLQYNFDTI
Sbjct: 1501 VDLPEEKLPISDSPPDTQEIHVIEQEKLEAQDSGEEARNLSFNELYPSGTLKLQYNFDTI 1560
Query: 1561 DQQFCDLADNKDTAECDIAEVDGELFVAQSNFTLILEGEEGEVEPGDFASSDVLPKAANT 1620
DQQFCDLADNKDTAECDIAEVDGELFVAQSNFTLILEGEEGEVEPGDFASSDVLPKAANT
Sbjct: 1561 DQQFCDLADNKDTAECDIAEVDGELFVAQSNFTLILEGEEGEVEPGDFASSDVLPKAANT 1620
Query: 1621 ATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPYVPEPIKVAIAENLLDVIKDTR 1680
ATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPYVPEPIKVAIAENLLDVIKDTR
Sbjct: 1621 ATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPYVPEPIKVAIAENLLDVIKDTR 1680
Query: 1681 SKEITSDTMEQSIHETIPLVSQNIMCPTKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTR 1740
SKEITSDTMEQSIHETIPLVSQNIMCPTKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTR
Sbjct: 1681 SKEITSDTMEQSIHETIPLVSQNIMCPTKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTR 1740
Query: 1741 TRGQRIQNVNVKSAQQEASADVATPKMPGQSVRKKTRKAKEISEASENIYSDVRGLSQNQ 1800
TRGQRIQNVNVKSAQQEASADVATPKMPGQSVRKKTRKAKEISEASENIYSDVRGLSQNQ
Sbjct: 1741 TRGQRIQNVNVKSAQQEASADVATPKMPGQSVRKKTRKAKEISEASENIYSDVRGLSQNQ 1800
Query: 1801 QIPQNSVTPRRGRRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKK 1860
QIPQNSVTPRRGRRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKK
Sbjct: 1801 QIPQNSVTPRRGRRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKK 1860
Query: 1861 EVKVSSVTKRTPRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNK 1920
EVKVSSVTKRTPRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNK
Sbjct: 1861 EVKVSSVTKRTPRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNK 1920
Query: 1921 QDDKSSDKQLRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKI 1980
QDDKSSDKQLRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKI
Sbjct: 1921 QDDKSSDKQLRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKI 1980
Query: 1981 NPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSM 2040
NPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSM
Sbjct: 1981 NPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSM 2040
Query: 2041 VMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTR 2100
VMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTR
Sbjct: 2041 VMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTR 2100
Query: 2101 SSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRS 2160
SSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRS
Sbjct: 2101 SSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRS 2160
Query: 2161 RQKNTSNKNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSPPPIEIRL 2220
RQKNTSNKNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSPPPIEIRL
Sbjct: 2161 RQKNTSNKNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSPPPIEIRL 2220
Query: 2221 ISPLASPADGVKSKPRKTTEVTGTGLGRNRKKLSSYPKQILRRKML 2266
ISPLASPADGVKSKPRKTTEVTGTGLGRNRKKLSSYPKQILRRKML
Sbjct: 2221 ISPLASPADGVKSKPRKTTEVTGTGLGRNRKKLSSYPKQILRRKML 2266
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 62.4 bits (150), Expect = 5e-09
Identities = 196/1053 (18%), Positives = 383/1053 (36%), Gaps = 189/1053 (17%)
Query: 1286 KEHQEMD----------EGSQSLEKLDVSKGNSSVSITSDETTLEYQDAPSPEDLEETVF 1335
KEH+ +D E +LEK D+SK + +S ++ +Q+ P+ E
Sbjct: 392 KEHKVIDAKFETKARKGEKPCALEKKDISKSEAKLSRKQVDSEHMHQNVPTEEQRTNKST 451
Query: 1336 TASKPKSSSTALTTNVTEQTEKDGDKDVFASEVTPSDLQKQMGNLEDAETKDLLVAAEAF 1395
KS T +D D D+ + PS + + + E+ ET A E
Sbjct: 452 GGEHKKSDRKEEPQYEPANTSEDLDMDIVS---VPSSVPEDI--FENLET-----AMEVQ 501
Query: 1396 SELNHLSP-VQGTEASLCAPSVYEGKIFTQKSKVPVLDEGLTSV--ETY---TPAIRAND 1449
S ++H GTE + + SV + I ++ ++ + + V E Y TP +N
Sbjct: 502 SSVDHQGDGSSGTEQEVESSSV-KLNISSKDNRGGIKSKTTAKVTKELYVKLTPVSLSNS 560
Query: 1450 NKSMADV--LGDGGNSSLTISEGPIVSERRLNQEVALNLKEDH--EVEVGVLKESVDL-- 1503
AD + + + P + + L QE N +H E EV +L E DL
Sbjct: 561 PIKGADCQEVPQDKDGYKSCGLNPKLEKCGLGQE---NSDNEHLVENEVSLLLEESDLRR 617
Query: 1504 -----------PEEKLPISDSPPDTQEIHVIEQEKLEAQDSGEEARNLSFNELYPSGTLK 1552
P E P++ + + V E++KL ++ RN S + + K
Sbjct: 618 SPRVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNK 677
Query: 1553 L--QYNFDTIDQ-----------QFCDLADNKDTAECDIAEVDGELFVAQSNFTLILEGE 1599
L +T+DQ + + +++ DI E+ T + +
Sbjct: 678 LPKSKQSETVDQNSDSDEMLAILKEVSRMSHSSSSDTDINEIHTNHKTLYDLKTQAGKDD 737
Query: 1600 EGEVEPGDFASSDVLPKAANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPY 1659
+G+ + S + + ++ + + +N S + + KS
Sbjct: 738 KGKRKRKSSTSGSDFDTKKGKSAKSSIISKKKRQTQSESSNYDSELEKEIKSMS------ 791
Query: 1660 VPEPIKVAIAENLLDVIKDTRSKEITSDT------MEQSIHETIPLVSQNIM--CPTKLV 1711
K+ A I +T+ + + D M+ H+ + + K
Sbjct: 792 -----KIGAARTTKKRIPNTKDFDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQE 846
Query: 1712 KSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKM---P 1768
+ F +A+ T + ++ D + K + V+ S ++++ + K+
Sbjct: 847 RETFSSAEGTVDKDTTIMELRDRLPKKQQASAS-TDGVDKLSGKEQSFTSLEVRKVAETK 905
Query: 1769 GQSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQ-NSVTPRRGRRKKEVNQDILENTS 1827
+S KT+ K++ + +I Q+ + + + ++G +K+ D +
Sbjct: 906 EKSKHLKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVI 965
Query: 1828 SVEQELQITTGRESKRLKSSQL------LEPAVEETTKKEVKVSSVTKRTPRR------- 1874
+EQ+ + ++ K + ++ ++ TT E K + +T ++
Sbjct: 966 KMEQQYESSSDGTEKLPEREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDELSDY 1025
Query: 1875 IKRSVENQESVEIINDLK-----VSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQ 1929
++S +S + D K +++ K D S + K K
Sbjct: 1026 AEKSTGKGDSCDSSEDKKSKNGAYGREKKRCKLLGKSSRKRQDCSSSDTEKYSMKEDGCN 1085
Query: 1930 LRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSK 1989
K ++R+ ++RE NL S + T + + S+ + SED
Sbjct: 1086 SSDKRLKRI--------ELRERRNLSSKRNTKEIQSGSSSSDAEES-------SED---N 1127
Query: 1990 AVKEERSPKKKEAPSI--RRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKK 2047
K++R+ KK+A + ++R++ T K + D+
Sbjct: 1128 KKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADI------------------------- 1162
Query: 2048 LTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILL 2107
T + S + +S+ E +DE K E L + F +SS S + +
Sbjct: 1163 -TSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENLV-LSSHTGFCQSSGDEALSKSVPVTV 1220
Query: 2108 PDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSN 2167
D + N+ P AKK+ L+E+ ++LSS + +S+
Sbjct: 1221 DDDDDDND----------PENRIAKKM----LLEEIKANLSSD-----------EDGSSD 1255
Query: 2168 KNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSPPPIEIRLISPLASP 2227
E + + Q+ E G +AK S++ S+ ++K P RL+ +
Sbjct: 1256 DEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKK------PRYRHRLLRHKLTV 1309
Query: 2228 ADG-----VKSKPRKTTEVTGTGLGRNRKKLSS 2255
+DG K+KP++ EV GRNR+K+SS
Sbjct: 1310 SDGESGEEKKTKPKEHKEVK----GRNRRKVSS 1338
Score = 45.8 bits (107), Expect = 5e-04
Identities = 75/366 (20%), Positives = 137/366 (37%), Gaps = 62/366 (16%)
Query: 1774 KKTRKAKEISEASENIYSDVRG--LSQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVEQ 1831
K +RK ++ S + YS S ++++ + + RR K ++I +SS +
Sbjct: 1061 KSSRKRQDCSSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGSSSSDA 1120
Query: 1832 ELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQESVEIINDL 1891
E ++ K+ SS+ V+E + ++ S TKR I S + +E +
Sbjct: 1121 EESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTS--TKRKQADITSS--SSSDIEDDDQN 1176
Query: 1892 KVSTVTSPSRMIRKLRSTNLDASENTGNKQ-----------------DDKSSDKQLRIKH 1934
+ +S + I+ + + NL S +TG Q DD +D + RI
Sbjct: 1177 SIGEGSSDEQKIKPV-TENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRIAK 1235
Query: 1935 ---VRRVRGREVSPSDVREDSNLES-------------------SQLTVQAEFDMSAIPR 1972
+ ++ S D D E +Q+ +++ D +
Sbjct: 1236 KMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKK 1295
Query: 1973 KRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAK-SENVDVGKPALGKSI 2031
R R R + V EE+ K KE ++ R+ R ++ SE+ D + + + +
Sbjct: 1296 PRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEV 1355
Query: 2032 LVPNEELSMVMSSKKK--LTKKTESQSQKRSLHSV-------------SEERTDEMTHKE 2076
+E S KK L + S QK+ + SEE +E +E
Sbjct: 1356 SESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEE 1415
Query: 2077 TNEQEE 2082
E+EE
Sbjct: 1416 EEEEEE 1421
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 62.4 bits (150), Expect = 5e-09
Identities = 196/1053 (18%), Positives = 383/1053 (36%), Gaps = 189/1053 (17%)
Query: 1286 KEHQEMD----------EGSQSLEKLDVSKGNSSVSITSDETTLEYQDAPSPEDLEETVF 1335
KEH+ +D E +LEK D+SK + +S ++ +Q+ P+ E
Sbjct: 430 KEHKVIDAKFETKARKGEKPCALEKKDISKSEAKLSRKQVDSEHMHQNVPTEEQRTNKST 489
Query: 1336 TASKPKSSSTALTTNVTEQTEKDGDKDVFASEVTPSDLQKQMGNLEDAETKDLLVAAEAF 1395
KS T +D D D+ + PS + + + E+ ET A E
Sbjct: 490 GGEHKKSDRKEEPQYEPANTSEDLDMDIVS---VPSSVPEDI--FENLET-----AMEVQ 539
Query: 1396 SELNHLSP-VQGTEASLCAPSVYEGKIFTQKSKVPVLDEGLTSV--ETY---TPAIRAND 1449
S ++H GTE + + SV + I ++ ++ + + V E Y TP +N
Sbjct: 540 SSVDHQGDGSSGTEQEVESSSV-KLNISSKDNRGGIKSKTTAKVTKELYVKLTPVSLSNS 598
Query: 1450 NKSMADV--LGDGGNSSLTISEGPIVSERRLNQEVALNLKEDH--EVEVGVLKESVDL-- 1503
AD + + + P + + L QE N +H E EV +L E DL
Sbjct: 599 PIKGADCQEVPQDKDGYKSCGLNPKLEKCGLGQE---NSDNEHLVENEVSLLLEESDLRR 655
Query: 1504 -----------PEEKLPISDSPPDTQEIHVIEQEKLEAQDSGEEARNLSFNELYPSGTLK 1552
P E P++ + + V E++KL ++ RN S + + K
Sbjct: 656 SPRVKTTPLRRPTETNPVTSNSDEECNETVKEKQKLSVPVRKKDKRNSSDSAIDNPKPNK 715
Query: 1553 L--QYNFDTIDQ-----------QFCDLADNKDTAECDIAEVDGELFVAQSNFTLILEGE 1599
L +T+DQ + + +++ DI E+ T + +
Sbjct: 716 LPKSKQSETVDQNSDSDEMLAILKEVSRMSHSSSSDTDINEIHTNHKTLYDLKTQAGKDD 775
Query: 1600 EGEVEPGDFASSDVLPKAANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPY 1659
+G+ + S + + ++ + + +N S + + KS
Sbjct: 776 KGKRKRKSSTSGSDFDTKKGKSAKSSIISKKKRQTQSESSNYDSELEKEIKSMS------ 829
Query: 1660 VPEPIKVAIAENLLDVIKDTRSKEITSDT------MEQSIHETIPLVSQNIM--CPTKLV 1711
K+ A I +T+ + + D M+ H+ + + K
Sbjct: 830 -----KIGAARTTKKRIPNTKDFDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQE 884
Query: 1712 KSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKM---P 1768
+ F +A+ T + ++ D + K + V+ S ++++ + K+
Sbjct: 885 RETFSSAEGTVDKDTTIMELRDRLPKKQQASAS-TDGVDKLSGKEQSFTSLEVRKVAETK 943
Query: 1769 GQSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQ-NSVTPRRGRRKKEVNQDILENTS 1827
+S KT+ K++ + +I Q+ + + + ++G +K+ D +
Sbjct: 944 EKSKHLKTKTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKKVI 1003
Query: 1828 SVEQELQITTGRESKRLKSSQL------LEPAVEETTKKEVKVSSVTKRTPRR------- 1874
+EQ+ + ++ K + ++ ++ TT E K + +T ++
Sbjct: 1004 KMEQQYESSSDGTEKLPEREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDELSDY 1063
Query: 1875 IKRSVENQESVEIINDLK-----VSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQ 1929
++S +S + D K +++ K D S + K K
Sbjct: 1064 AEKSTGKGDSCDSSEDKKSKNGAYGREKKRCKLLGKSSRKRQDCSSSDTEKYSMKEDGCN 1123
Query: 1930 LRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSK 1989
K ++R+ ++RE NL S + T + + S+ + SED
Sbjct: 1124 SSDKRLKRI--------ELRERRNLSSKRNTKEIQSGSSSSDAEES-------SED---N 1165
Query: 1990 AVKEERSPKKKEAPSI--RRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKK 2047
K++R+ KK+A + ++R++ T K + D+
Sbjct: 1166 KKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADI------------------------- 1200
Query: 2048 LTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILL 2107
T + S + +S+ E +DE K E L + F +SS S + +
Sbjct: 1201 -TSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENLV-LSSHTGFCQSSGDEALSKSVPVTV 1258
Query: 2108 PDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSN 2167
D + N+ P AKK+ L+E+ ++LSS + +S+
Sbjct: 1259 DDDDDDND----------PENRIAKKM----LLEEIKANLSSD-----------EDGSSD 1293
Query: 2168 KNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSPPPIEIRLISPLASP 2227
E + + Q+ E G +AK S++ S+ ++K P RL+ +
Sbjct: 1294 DEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKK------PRYRHRLLRHKLTV 1347
Query: 2228 ADG-----VKSKPRKTTEVTGTGLGRNRKKLSS 2255
+DG K+KP++ EV GRNR+K+SS
Sbjct: 1348 SDGESGEEKKTKPKEHKEVK----GRNRRKVSS 1376
Score = 45.8 bits (107), Expect = 5e-04
Identities = 75/366 (20%), Positives = 137/366 (37%), Gaps = 62/366 (16%)
Query: 1774 KKTRKAKEISEASENIYSDVRG--LSQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVEQ 1831
K +RK ++ S + YS S ++++ + + RR K ++I +SS +
Sbjct: 1099 KSSRKRQDCSSSDTEKYSMKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGSSSSDA 1158
Query: 1832 ELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQESVEIINDL 1891
E ++ K+ SS+ V+E + ++ S TKR I S + +E +
Sbjct: 1159 EESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTS--TKRKQADITSS--SSSDIEDDDQN 1214
Query: 1892 KVSTVTSPSRMIRKLRSTNLDASENTGNKQ-----------------DDKSSDKQLRIKH 1934
+ +S + I+ + + NL S +TG Q DD +D + RI
Sbjct: 1215 SIGEGSSDEQKIKPV-TENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRIAK 1273
Query: 1935 ---VRRVRGREVSPSDVREDSNLES-------------------SQLTVQAEFDMSAIPR 1972
+ ++ S D D E +Q+ +++ D +
Sbjct: 1274 KMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKK 1333
Query: 1973 KRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAK-SENVDVGKPALGKSI 2031
R R R + V EE+ K KE ++ R+ R ++ SE+ D + + + +
Sbjct: 1334 PRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEV 1393
Query: 2032 LVPNEELSMVMSSKKK--LTKKTESQSQKRSLHSV-------------SEERTDEMTHKE 2076
+E S KK L + S QK+ + SEE +E +E
Sbjct: 1394 SESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEE 1453
Query: 2077 TNEQEE 2082
E+EE
Sbjct: 1454 EEEEEE 1459
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 61.6 bits (148), Expect = 8e-09
Identities = 99/462 (21%), Positives = 175/462 (37%), Gaps = 45/462 (9%)
Query: 1765 PKMPGQSVRKKTRKAKEIS--EASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDI 1822
PK+P S K + ++I E SE V ++ Q+ + K+E ++
Sbjct: 427 PKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEE 486
Query: 1823 L-----------ENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRT 1871
E T S E + +E+K + PA ++ +KE S ++
Sbjct: 487 EGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKS 546
Query: 1872 PRRIKRSV-ENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDK-Q 1929
P + K E +S + SP+ ++ A E + + KS +K +
Sbjct: 547 PEKAKSPAKEEAKSPPEAKSPEKEEAKSPAE-VKSPEKAKSPAKEEAKSPAEAKSPEKAK 605
Query: 1930 LRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSK 1989
+K + SP V+E++ +S E S + P K E +K
Sbjct: 606 SPVKEEAKSPAEAKSP--VKEEA--KSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAK 661
Query: 1990 AVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLT 2049
+ ++ +SP K EA S + + P K+E P KS + EE K K
Sbjct: 662 SPEKAKSPVKAEAKSPEKAKS---PVKAE---AKSPEKAKSPV--KEEAKS--PEKAKSP 711
Query: 2050 KKTESQSQKRSLHSVSEE-RTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLP 2108
K E++S +++ V EE +T E E+ + + KS ++T K+ P
Sbjct: 712 VKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAK----SPEKAKSPEKAKTLDVKS---P 764
Query: 2109 DLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNK 2168
+ P E SPA + P KAK+ E ++ S L ++ +K K
Sbjct: 765 EAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKED-------AKAPEKEIPKK 817
Query: 2169 NKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESA 2210
+++ +K++ + E K K+ K K EK+ +
Sbjct: 818 EEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDS 859
Score = 45.8 bits (107), Expect = 5e-04
Identities = 108/588 (18%), Positives = 203/588 (34%), Gaps = 73/588 (12%)
Query: 1598 GEEGEVEPGDFASSDVLPKAANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTL 1657
GEE E E G+ + P A A+ EK S + A P+ S +K +
Sbjct: 489 GEEEEAEGGEEETKS--PPAEEAASPEKEAKSPVKEE----AKSPAEAKSPEKEE----- 537
Query: 1658 PYVPEPIKVAIAENLLDVIKDTRSKEITSDTMEQSIHETIPLVSQNIMCPTKL---VKSA 1714
P +V E K +E S +S + + P K K
Sbjct: 538 --AKSPAEVKSPEKA----KSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEE 591
Query: 1715 FKTAQETSTMTMNVSQVDDVVSS----KTRTRGQRIQNVNVKSAQQEASADVATPKMPGQ 1770
K+ E + S V + S K+ + + VKS ++ S K P +
Sbjct: 592 AKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEK 651
Query: 1771 SVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVE 1830
+ + +AK +A + ++ + P+ + +P + K S V+
Sbjct: 652 AKSPEKEEAKSPEKAKSPVKAEAKS-------PEKAKSPVKAEAKSPEKAK-----SPVK 699
Query: 1831 QELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVT-KRTPRRIKRSVENQESVEIIN 1889
+E + ++ KS E E K VK + T ++ +K ++ E +
Sbjct: 700 EE-----AKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPE 754
Query: 1890 DLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVR 1949
K V SP A E + D + +K V+ E + S ++
Sbjct: 755 KAKTLDVKSPE--------AKTPAKEEARSPADKFPEKAKSPVKE--EVKSPEKAKSPLK 804
Query: 1950 EDSNLESSQLTVQAEFDMSAIPRKRGR-------PRKINPSEDVGSKAVKEERSPKKKEA 2002
ED+ ++ + E ++ + P+K + + +E++ KK+EA
Sbjct: 805 EDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEA 864
Query: 2003 PSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTE--SQSQKRS 2060
P + K V+ K + ++ E+ V + +K+ K E ++ +
Sbjct: 865 PKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKE 924
Query: 2061 LHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNEPLFS 2120
V+++ D+ KE ++ E+ A + T+ KA +P +P
Sbjct: 925 KTEVAKKEPDDAKAKEPSKPAEKKEA------APEKKDTKEEKA------KKPEEKPKTE 972
Query: 2121 PASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNK 2168
++ K +K+ P K S + Q PP + K K
Sbjct: 973 AKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK 1020
Score = 38.5 bits (88), Expect = 0.076
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 20/191 (10%)
Query: 2057 QKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNE 2116
+K + V EE K ++E + A + ++S +K+ P+ P E
Sbjct: 513 EKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSP--PEAKSPEKE 570
Query: 2117 PLFSPAS-EVPRKAKA---KKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNKNKLE 2172
SPA + P KAK+ ++ + PA+ K S P + K+ ++
Sbjct: 571 EAKSPAEVKSPEKAKSPAKEEAKSPAEAK-------SPEKAKSPVKEEAKSPAEAKSPVK 623
Query: 2173 DELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWS------PPPIEIRLISPLAS 2226
+E K A+ V++ K K+ +K+ + +K+ EKE A S P E + S
Sbjct: 624 EEAKSPAE-VKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKS 682
Query: 2227 PADGVKSKPRK 2237
P P K
Sbjct: 683 PVKAEAKSPEK 693
Score = 33.1 bits (74), Expect = 3.2
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 2154 SPPALRSRQKNTSNKNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSP 2213
SPPA + K+ +++E K A++ ++ K +AK K+ + +K+ KE A SP
Sbjct: 503 SPPAEEAASPEKEAKSPVKEEAKSPAEA-KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSP 561
Query: 2214 PPIEIRLISPLASPADGVKS 2233
P + SPA+ VKS
Sbjct: 562 PEAKSPEKEEAKSPAE-VKS 580
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 60.8 bits (146), Expect = 1e-08
Identities = 127/613 (20%), Positives = 232/613 (37%), Gaps = 99/613 (16%)
Query: 1677 KDTRSKEITSDTMEQSI-----------HETIPLVSQNIMCPTKLVKSAFKTAQETSTMT 1725
+DT + +TSD+ME+ ++T S + TK V+ A+ + +
Sbjct: 421 EDTEEEVVTSDSMEEGEITSDDEEKNKQNKTKTQTSDSSEGKTKSVRHAY--VHKPYLYS 478
Query: 1726 MNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMPGQSVRKKTRKAKEISEA 1785
S DD ++ + QR Q++ + ++ + K+ ++ RK K
Sbjct: 479 KYYSDSDDELTVE-----QRRQSIAKEKEERLLRRQINREKL------EEKRKQKAEKTK 527
Query: 1786 SENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVEQELQITTGRESKRLK 1845
S R ++ S+ P+ R K ++L+ +E+++ ++ KR K
Sbjct: 528 SSKTKGQGRSSVDLEESSTKSLEPKAARIK-----EVLKERKVLEKKVALS----KKRKK 578
Query: 1846 SSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQESVEIINDLK-VSTVTSPSRMIR 1904
S+ VEE +KK+ + +K T + + +E + +LK V + PS+ R
Sbjct: 579 DSR----NVEENSKKKQQYEEDSKETLKTSEHC--EKEKISSSKELKHVHAKSEPSKPAR 632
Query: 1905 KLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAE 1964
+L SE+ + D+ ++ +L +H RR V V+E+++ + V+
Sbjct: 633 RL-------SESL-HVVDENKNESKLEREHKRRT-STPVIMEGVQEETDTRDVKRQVERS 683
Query: 1965 FDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGK 2024
+ P+K+ K +S KKE S + + R + + V
Sbjct: 684 EICTEEPQKQKSTLKNEKHLKKDDSETPHLKSLLKKEVKSSKEKPEREKTPSEDKLSVKH 743
Query: 2025 PALGKSILVPNEELSMVMSSKK-KLTKKTESQSQKRSLHS-------------------- 2063
G + +E + S K K+ + + QSQ+ L S
Sbjct: 744 KYKGDCMHKTGDETELHSSEKGLKVEENIQKQSQQTKLSSDDKTERKSKHRNERKLSVLG 803
Query: 2064 -----VSEE--RTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNE 2116
VSE +TDE KE N++E RL +A TK+ SR S I L +
Sbjct: 804 KDGKPVSEYIIKTDENVRKENNKKERRL--SAEKTKAEHKSRRSSDSKIQKDSLGSKQHG 861
Query: 2117 PLFSPASEVPRKAKA-----------KKIEVPAQLKELVSDLSSQFVISPPALRSRQKNT 2165
SE + K K EV + K L + ++ L+S+ K
Sbjct: 862 ITLQRRSESYSEDKCDMDSTNMDSNLKPEEVVHKEKRRTKSLLEEKLV----LKSKSKTQ 917
Query: 2166 SNKNK-LEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSPPPIEIRLISPL 2224
+ K +E EL++ A T KP ++ T++ +++S P E + P+
Sbjct: 918 GKQVKVVETELQEGATKQATTPKPDKEK----NTEENDSEKQRKSKVEDKPFEETGVEPV 973
Query: 2225 ASPADGVKSKPRK 2237
A +K
Sbjct: 974 LETASSSAHSTQK 986
Score = 54.7 bits (130), Expect = 1e-06
Identities = 100/455 (21%), Positives = 185/455 (40%), Gaps = 83/455 (18%)
Query: 1818 VNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKE---VKVSSVTKRTPRR 1874
+NQ+ +S E T+ R SK+L S +P + +T KE ++ K T
Sbjct: 211 LNQEASAARASTETSNAKTSERASKKLPS----QPTTDTSTDKERTSEDMADKEKSTADS 266
Query: 1875 IKRSVENQESVEIINDLK--VSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRI 1932
+E E +DL V + + ++ L N D + + ++Q +KS+DK
Sbjct: 267 GGEGLETAPKSEEFSDLPCPVEEIKNYTKEHNNLILLNKDVQQES-SEQKNKSTDK---- 321
Query: 1933 KHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVK 1992
G + S+ + + E + T + +FD S SED ++ VK
Sbjct: 322 -------GEKKPDSNEKGERKKEKKEKT-EKKFDHS------------KKSED--TQKVK 359
Query: 1993 EERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKT 2052
+E+ K+KE S++ S +N+ K++ V+ K E+ S++ S LT T
Sbjct: 360 DEKQAKEKEVESLKLPSEKNS-NKAKTVEGTK-----------EDFSLIDSDVDGLTDIT 407
Query: 2053 ESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSE 2112
S L S E+ +E+ ++ E+ E T+ + ++ ++T++ + D SE
Sbjct: 408 VSSVHTSDLSSFEEDTEEEVVTSDSMEEGE---ITSDDEEKNKQNKTKTQTS----DSSE 460
Query: 2113 PNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNKNKLE 2172
+ + + P + SD + + + RQ K +
Sbjct: 461 GKT-----------KSVRHAYVHKPYLYSKYYSDSDDELTVE----QRRQSIAKEKEERL 505
Query: 2173 DELKDDAQSVETLGKPKAKRIRTSKTK---QASKNTEKESAWSPPPIEIRLISPLASPAD 2229
+ + + +E K KA++ ++SKTK ++S + E+ S S P R+ L
Sbjct: 506 LRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSVDLEESSTKSLEPKAARIKEVL----- 560
Query: 2230 GVKSKPRKTTEVTGTGLGRNRKKLSSYPKQILRRK 2264
K RK E L + RKK S ++ ++K
Sbjct: 561 ----KERKVLE-KKVALSKKRKKDSRNVEENSKKK 590
Score = 41.2 bits (95), Expect = 0.012
Identities = 128/631 (20%), Positives = 233/631 (36%), Gaps = 85/631 (13%)
Query: 1281 LNSPEKEHQEMDEGSQSLEKLDVSKGNSSVSITSDETTLEYQDAPSPEDL---EETVFTA 1337
LNS +KE + + G+ G SS + S LE +A SP L E+T
Sbjct: 2466 LNSLQKEDKSPETGTA---------GGSSTASYSAGRGLE-GNANSPAHLRGPEQTSGQT 2515
Query: 1338 SKPKSSSTALTTNVTEQTEKDGDKDVFASEVT-----PSDLQKQMGNLEDAETKDLLVAA 1392
+K S S V K D V P++ Q NL+ + TK +
Sbjct: 2516 AKDPSVSIRYLAAVNTGAIKADDMPPVQGTVAEHSFLPAEQQGSEDNLKTSTTKCITGQE 2575
Query: 1393 EAFSELNHLSPVQGTEASLCAPSVYEGKIFTQKSKVPVLDEGLTSVETYTPAIRANDNKS 1452
+ + + P +L AP + D+ A + D+ S
Sbjct: 2576 SKIAPSHTMIPPATYSVALLAPKCEQDLTIKNDYSGKWTDQA--------SAEKTGDDNS 2627
Query: 1453 MADVLGDGGNSSLTISEGPIVSERRLNQEVALNLKEDHEVEVGVLKES-VDLPEEKLPIS 1511
+ G+ +T+S V + N+E LN+ +++ + E+ V EEK
Sbjct: 2628 TRKSFPEEGDIMVTVSSEENVCDIG-NEESPLNVLGGLKLKANLKMEAYVPSEEEKNGEI 2686
Query: 1512 DSPPDT------------QEIHVIEQEKLEAQDSGEEARNLSFNELYPSGTLKLQYNFDT 1559
+PP++ Q ++ E L ++SG +E Y G + D
Sbjct: 2687 LAPPESLCGGKPSGIAELQREPLLVNESLNVENSGFRTNEEIHSESYNKGEISSGRK-DN 2745
Query: 1560 IDQQFCDLADNKDTAECDIAEVDGEL--FVAQSNFTLILEGEEGEVEPGDFASSDVLPKA 1617
+ A + + E D EV+ E + L E+ EP D + DVL
Sbjct: 2746 AE------AISGHSVEADPKEVEEEERHMPKRKRKQHYLSSED---EPDD--NPDVLDSR 2794
Query: 1618 ANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPYVPEPIKVAIAENLLDVIK 1677
TA + E + H T ++ S+ ++ LP + +++
Sbjct: 2795 IETAQRQ----CPETEPHD---------TKEENSRDLEELPKTSSETN-STTSRVMEEKD 2840
Query: 1678 DTRSKEITSDTMEQSIHETIP--------LVSQNIMCPTKL-VKSAFKTAQETSTMTMNV 1728
+ S E T + EQ+ +TI ++ + P K V++ K ++ T T V
Sbjct: 2841 EYSSSETTGEKPEQNDDDTIKSQEEDQPIIIKRKRGRPRKYPVETTLKMKDDSKTDTGIV 2900
Query: 1729 SQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMPGQSVRKKTRKAKEISEASEN 1788
+ SSK + N + Q+ + ++ + SVR++ RK K S++
Sbjct: 2901 TVEQSPSSSKLKVMQTDESNKETANLQERSISNDDGEEKIVTSVRRRGRKPKRSLTVSDD 2960
Query: 1789 IYSDVRGLSQNQQIPQNSVT-PRRGRRKKEVNQDILENTSSVEQELQITTGRESKRLKSS 1847
S S+ ++ Q SV+ P ++++E +++ E + S+ +S
Sbjct: 2961 AES-----SEPERKRQKSVSDPVEDKKEQESDEEEEEEEEDEPSGATTRSTTRSEAQRSK 3015
Query: 1848 QLLEPAVEETTKKEVKVSSVTKRTPRRIKRS 1878
L P+++ K+EV R +R++ +
Sbjct: 3016 TQLSPSIKR--KREVSPPGARTRGQQRVEEA 3044
Score = 38.5 bits (88), Expect = 0.076
Identities = 52/230 (22%), Positives = 90/230 (39%), Gaps = 41/230 (17%)
Query: 1900 SRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVREDSNLESSQL 1959
SR + +L T+ + + T ++K E S S+ + ++
Sbjct: 2815 SRDLEELPKTSSETNSTTSRVMEEKD----------------EYSSSETTGEKPEQNDDD 2858
Query: 1960 TV--QAEFDMSAIPRKRGRPRKI----------NPSEDVGSKAVKEERSPKKKEAPSI-- 2005
T+ Q E I RKRGRPRK + D G V++ S K +
Sbjct: 2859 TIKSQEEDQPIIIKRKRGRPRKYPVETTLKMKDDSKTDTGIVTVEQSPSSSKLKVMQTDE 2918
Query: 2006 RRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQS---QKRSLH 2062
+ T N +S + D G+ + S+ + K+ LT +++S +++
Sbjct: 2919 SNKETANLQERSISNDDGEEKIVTSVRRRGRK------PKRSLTVSDDAESSEPERKRQK 2972
Query: 2063 SVSEERTD--EMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDL 2110
SVS+ D E E E+EE + + T+S+ S + SK L P +
Sbjct: 2973 SVSDPVEDKKEQESDEEEEEEEEDEPSGATTRSTTRSEAQRSKTQLSPSI 3022
Score = 33.5 bits (75), Expect = 2.4
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 32/212 (15%)
Query: 2013 TPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEM 2072
TP S NV ++ ++I N+E S +S + KT ++ K+ S+ TD
Sbjct: 190 TPGPSANVANDAMSILETITSLNQEASAARASTETSNAKTSERASKKL---PSQPTTDTS 246
Query: 2073 THKETNEQE--ERLLATASFTKSSRSSRTRSSKAILLPD--------LSEPNNEPLFSP- 2121
T KE ++ ++ +TA + +S + LP E NN L +
Sbjct: 247 TDKERTSEDMADKEKSTADSGGEGLETAPKSEEFSDLPCPVEEIKNYTKEHNNLILLNKD 306
Query: 2122 ----ASEVPRKAKAKKIEVP------AQLKELVSDLSSQFVISPPALRSRQKNTSNKNKL 2171
+SE K+ K + P + KE +F K + + K+
Sbjct: 307 VQQESSEQKNKSTDKGEKKPDSNEKGERKKEKKEKTEKKF--------DHSKKSEDTQKV 358
Query: 2172 EDELKDDAQSVETLGKPKAKRIRTSKTKQASK 2203
+DE + + VE+L P K +KT + +K
Sbjct: 359 KDEKQAKEKEVESLKLPSEKNSNKAKTVEGTK 390
Score = 32.3 bits (72), Expect = 5.4
Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 8/203 (3%)
Query: 1716 KTAQETSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMPGQSVR-- 1773
KT+ ET++ T V + D SS T + QN + QE + + G+ +
Sbjct: 2823 KTSSETNSTTSRVMEEKDEYSSSETTGEKPEQNDDDTIKSQEEDQPIIIKRKRGRPRKYP 2882
Query: 1774 -KKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVN-QDILENTSSVEQ 1831
+ T K K+ S+ I + + Q+ + V K+ N Q+ + E+
Sbjct: 2883 VETTLKMKDDSKTDTGIVT----VEQSPSSSKLKVMQTDESNKETANLQERSISNDDGEE 2938
Query: 1832 ELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQESVEIINDL 1891
++ + R ++ K S + E + + + SV+ + ++ + +E E ++
Sbjct: 2939 KIVTSVRRRGRKPKRSLTVSDDAESSEPERKRQKSVSDPVEDKKEQESDEEEEEEEEDEP 2998
Query: 1892 KVSTVTSPSRMIRKLRSTNLDAS 1914
+T S +R + T L S
Sbjct: 2999 SGATTRSTTRSEAQRSKTQLSPS 3021
>gi|239753245 PREDICTED: similar to UPF0634 protein C [Homo sapiens]
Length = 710
Score = 58.9 bits (141), Expect = 5e-08
Identities = 136/665 (20%), Positives = 254/665 (38%), Gaps = 85/665 (12%)
Query: 1604 EPGDFASSDVLPKAANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPYVPEP 1663
+P + A+SD +N ATE K E G ++ + +KV L +
Sbjct: 97 QPAEKATSDEKDSVSNIATEIK-----EGQQSGTVSPQKQSAQKVIFKKKVSLLN-IATR 150
Query: 1664 IKVAIAENLLDVIKDTRSKEITSDTMEQSIHETIPLVSQNIMCPT--KLVKSAFK-TAQE 1720
I + K SK + T S T + + C T + A K T E
Sbjct: 151 IMGGGKSGTVSSQKQPASKTASDKT--DSALNTATEIKDGLQCGTVSSQKQQALKATTDE 208
Query: 1721 TSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMPGQSVR----KKT 1776
+++ +++ D S T Q+ + S ++++ +++ K G+ R +K
Sbjct: 209 EGSVSNIATEIKDGEKSGT-VSSQKKPALKATSDEKDSFSNITREKKDGEISRTVSSQKP 267
Query: 1777 RKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVEQELQIT 1836
K S +++ + R ++ S G + +D L N + ++
Sbjct: 268 PALKATSVKEDSVLNIAREKKDGEKSRTVSFDQPPGLKATRDEKDSLLNIARGKKN---- 323
Query: 1837 TGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQESVEIINDLKVSTV 1896
G +++R+ S + +PA++ T+ ++ S++T+ ++ EI KVS+
Sbjct: 324 -GEKTRRVSSRK--KPALKATSDEKDSFSNITR-----------GKKDGEISR--KVSSQ 367
Query: 1897 TSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVREDSNLES 1956
P+ L+ T+ + G +++K +K + V + + S +DS L
Sbjct: 368 KPPT-----LKGTSDEEDSVLGIARENKDGEKS---RTVSSEKPPGLKASSDEKDSVLNI 419
Query: 1957 SQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAK 2016
++ E RK+ + +D S +E KK+ R+ S++ PA
Sbjct: 420 ARGKKYGEKTKRVSSRKKPSLEATSDEKDSFSNITRE-----KKDGEISRKVSSQKPPAL 474
Query: 2017 SENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTH-- 2074
D LG + + E S +SS+K K S + L+ ++ E T
Sbjct: 475 KGTSDEEDSVLGIARENKDGEKSRTVSSEKPPGLKATSDEKDSVLNIARGKKDGEKTRTV 534
Query: 2075 --------KETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVP 2126
K T+++++ +L A K SRT SS+ +P + + VP
Sbjct: 535 SSRKKPALKATSDEKDSVLYIAREKKDGEKSRTVSSQ-------KQPALKAICDKEDSVP 587
Query: 2127 RKAKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNKNKLEDELKDDAQSVETLG 2186
A KK E ++ +SSQ PAL++ + + + E+KD QS G
Sbjct: 588 NMATEKKDE------QISGTVSSQ---KQPALKATSDKKDSVSNIPTEIKDGQQS----G 634
Query: 2187 KPKAKRIRTSKTKQASKNTEKESAWSPPPIEIR-LISPLASPADGVKSKPRKT-----TE 2240
+++ K K++ A +IR +SP A V K + + T
Sbjct: 635 TVSSQKQPAWKATSVKKDSVSNIATEIKDGQIRGTVSPQKQSAQKVIFKKKVSLLNIATR 694
Query: 2241 VTGTG 2245
+TG G
Sbjct: 695 ITGGG 699
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 55.8 bits (133), Expect = 5e-07
Identities = 76/326 (23%), Positives = 130/326 (39%), Gaps = 31/326 (9%)
Query: 1762 VATPKMPGQSVRKKTRKAKEIS-EASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQ 1820
V K Q ++ + RK K+ E +E I V + + P+ S++PRR R+
Sbjct: 223 VPVQKNIDQQIKTRPRKIKKDGKEGAEEIDRHVE--RRRSRSPRRSLSPRRSPRRSRSRS 280
Query: 1821 DILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVE 1880
E S + RE +R K Q LE +E K+ + S+ + RR RS E
Sbjct: 281 HHREGHGSSSFD------RELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRE 334
Query: 1881 NQESVEIINDLKVSTVTSPSRMIRKL---RSTNLDASENTGNKQDDKSSDKQLRIKHVRR 1937
S D K ++ R + D + GN+++ + + R K +R
Sbjct: 335 RHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKE-QR 393
Query: 1938 VRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSP 1997
RG EV +ED + + + R R R RK + S A K RS
Sbjct: 394 SRG-EVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERK-HRSRSRSRNAGKRSRSR 451
Query: 1998 KKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQ 2057
K+++ + S + +S + G+ V SKK+ ++ +S+
Sbjct: 452 SKEKSSKHKNESKEKSNKRSRSGSQGRT-------------DSVEKSKKREHSPSKEKSR 498
Query: 2058 KRSLHSVSEERTDEMTHKETNEQEER 2083
KRS S+ER+ + H ++ +Q ++
Sbjct: 499 KRSR---SKERSHKRDHSDSKDQSDK 521
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 55.5 bits (132), Expect = 6e-07
Identities = 97/474 (20%), Positives = 173/474 (36%), Gaps = 59/474 (12%)
Query: 1751 VKSAQQEASADVATPKMPGQSVRKKTRKAKE-----ISEASENIYSDV-RGLSQNQQIPQ 1804
+K ++ AT Q V +KT++ E + + EN S + S+ Q
Sbjct: 127 LKKDSKKKGGSYATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSSETNPESQ 186
Query: 1805 NSVTPRRGRRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKV 1864
NS T + +K+ +N+ E T K LK S+ + E +
Sbjct: 187 NSKTVSKNCSQKDKKDS--KNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSE---- 240
Query: 1865 SSVTKRTPRRIKRSVENQESVEIINDLK-VSTVTSPSRMIRKLRSTNLDASENTGNKQDD 1923
+S+ + +S + ES+ L+ S S + ++ + T D +N D
Sbjct: 241 NSLNVDFLMLVGQS--DDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDA 298
Query: 1924 KSSDKQLRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPS 1983
+S D + K ++V+ + V D ++D ++ + AE S RK + K
Sbjct: 299 ESEDSKDAKKDSKKVK-KNVKKDDKKKDVKKDTE--STDAESGDSKDERKDTKKDKKKLK 355
Query: 1984 EDVGSKAVKEERSPKKKEAPSIR--RRSTRNTPAKSENVDVGKPALGKSILVPNEELSMV 2041
+D K K+ E+ + R +RN S+N D K A
Sbjct: 356 KDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDA--------------- 400
Query: 2042 MSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRS 2101
KK+T T+S+S+ S S +E+ D+ K N++ K+ S
Sbjct: 401 ----KKITFSTDSESELESKESQKDEKKDKKDSKTDNKKS---------VKNDEESTDAD 447
Query: 2102 SKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELV--SDLSSQFVISPPALR 2159
SEP + E K +KK + K+ +++ S +
Sbjct: 448 ---------SEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKH 498
Query: 2160 SRQKNTSNKNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSP 2213
S++K S K+ +D KD + + +TS + S +ES + P
Sbjct: 499 SKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTESEESLYKP 552
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 52.4 bits (124), Expect = 5e-06
Identities = 116/563 (20%), Positives = 209/563 (37%), Gaps = 99/563 (17%)
Query: 1675 VIKDTRSKEITSDTMEQSIHETIPL--VSQNIMCPTKLV-----KSAFKTAQETSTMTMN 1727
V K + K +SD+ + S E ++ P K V K+A K ++ +S+
Sbjct: 74 VAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSSSEES- 132
Query: 1728 VSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMPGQSVRKKTRKAKEISEASE 1787
S DD K Q +Q K + +A A A PK KAK S+
Sbjct: 133 -SDDDDEEDQKK----QPVQ----KGVKPQAKAAKAPPK-----------KAKSSDSDSD 172
Query: 1788 NIYSDVRGLSQNQQIP------QNSVTPRRGRRKKEV-NQDILENTSSVEQELQITTGRE 1840
+ D +Q +I Q P+ R ++ N ++SS E
Sbjct: 173 SSSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEE 232
Query: 1841 SKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQESVEIINDLK-------- 1892
K + + P + K VK ++ TP R S E+ S E K
Sbjct: 233 EKAAATPKKTVPKKQVVAKAPVKAAT----TPTRKSSSSEDSSSDEEEEQKKPMKNKPGP 288
Query: 1893 VSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVREDS 1952
S+V PS K ++ G + K+ +KQ + V E S SD + S
Sbjct: 289 YSSVPPPSAPPPK---------KSLGTQPPKKAVEKQ------QPVESSEDS-SDESDSS 332
Query: 1953 NLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRN 2012
+ E + +A + + + S+ S + +++ +P K P+ +++ N
Sbjct: 333 SEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSK---PAGTTKNSSN 389
Query: 2013 TPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEM 2072
PA + KPA V +K LT+K +S S + S EE+T +M
Sbjct: 390 KPAVTTKSPAVKPAAAPK--------QPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKM 441
Query: 2073 THKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAK 2132
+ + + ++ + SR SS D ++E S+ K K +
Sbjct: 442 VATTKPKATAKAALSLPAKQAPQGSRDSSS------DSDSSSSEEEEEKTSKSAVKKKPQ 495
Query: 2133 KIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNKNKLEDELKDDAQSVETLGKPKAKR 2192
K+ A + P + + + +SN + +D +++ + ++ G P+ +
Sbjct: 496 KVAGGAAPSK------------PASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQA 543
Query: 2193 IR-------TSKTKQASKNTEKE 2208
+ T++ +A+KN+E+E
Sbjct: 544 PKANGTSALTAQNGKAAKNSEEE 566
Score = 40.4 bits (93), Expect = 0.020
Identities = 87/512 (16%), Positives = 177/512 (34%), Gaps = 21/512 (4%)
Query: 1639 ANLPSAVTSDQKSQKVDTLPYVPEPIKVAIAENLLDVIKDTRSKEITSDTMEQSIHETIP 1698
A + +S++ S D +P++ + K K +SD+ S E P
Sbjct: 121 AKASESSSSEESSDDDDEEDQKKQPVQKGVKPQA-KAAKAPPKKAKSSDSDSDSSSEDEP 179
Query: 1699 LVSQNIMCPTKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEA 1758
+Q VK+ K + + ++ SS + + + + A
Sbjct: 180 PKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATP 239
Query: 1759 SADV----ATPKMPGQSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRR 1814
V K P ++ TRK+ ++S + + + +N+ P +SV P
Sbjct: 240 KKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPP 299
Query: 1815 KKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRR 1874
K+ + +VE++ + + +S S E E+ + VS T + P
Sbjct: 300 PKK-SLGTQPPKKAVEKQQPVESSEDSSDESDSSSEE---EKKPPTKAVVSKATTKPPPA 355
Query: 1875 IKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKH 1934
K + + +S + + + P+ + S+N A ++ KQ +
Sbjct: 356 KKAAESSSDSSDSDSSEDDEAPSKPAGTTKN--SSNKPAVTTKSPAVKPAAAPKQ-PVGG 412
Query: 1935 VRRVRGREVSPSDVREDSNLESSQLTVQAEFDMS---------AIPRKRGRPRKINPSED 1985
+++ R+ S E+S+ + T + ++P K+ + S D
Sbjct: 413 GQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSD 472
Query: 1986 VGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSK 2045
S + +EE K A + + A S+ K S +++ S K
Sbjct: 473 SDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEK 532
Query: 2046 KKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAI 2105
K Q+ K + S + + E+EE+ A +KS + + ++A
Sbjct: 533 LKGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRKQNEAA 592
Query: 2106 LLPDLSEPNNEPLFSPASEVPRKAKAKKIEVP 2137
+ + L +P + RK K+ P
Sbjct: 593 KEAETPQAKKIKLQTPNTFPKRKKGEKRASSP 624
Score = 32.7 bits (73), Expect = 4.2
Identities = 51/227 (22%), Positives = 85/227 (37%), Gaps = 36/227 (15%)
Query: 2035 NEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSS 2094
+ +LS V + K T T+ + SL + K E +L A K +
Sbjct: 24 DNQLSEVANKFAKATGATQQDANASSLLDIYS-----FWLKSAKVPERKLQANGPVAKKA 78
Query: 2095 RSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVIS 2154
+ + S D SE E PA KK VPA+ L
Sbjct: 79 KKKASSSDSE----DSSEEEEEVQGPPA---------KKAAVPAKRVGL----------- 114
Query: 2155 PP---ALRSRQKNTSNKNKLEDELKDDA-QSVETLGKPKAKRIRT--SKTKQASKNTEKE 2208
PP A ++ + ++S ++ +D+ +D Q V+ KP+AK + K K + +++
Sbjct: 115 PPGKAAAKASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSS 174
Query: 2209 SAWSPPPIEIRLISPLASPADGVKSKPRKTTEVTGTGLGRNRKKLSS 2255
S PP + I+P+ A K+ P+ G+ SS
Sbjct: 175 SEDEPPKNQKPKITPVTVKAQ-TKAPPKPARAAPKIANGKAASSSSS 220
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 52.4 bits (124), Expect = 5e-06
Identities = 73/332 (21%), Positives = 128/332 (38%), Gaps = 32/332 (9%)
Query: 1842 KRLKSSQLLEPAVEETTKKEVKVSS------VTKRTPRRIKRSVENQESVEIINDLKVST 1895
+R S + L+PA + K V+ S VTK VE++E V + D + T
Sbjct: 537 QRADSRESLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVKKDKPIKT 596
Query: 1896 VTSPSRMIRKLRSTN--LDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVREDSN 1953
T PS +++ S KQ K + K V+ + +V P D +E+
Sbjct: 597 ETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVK--KETKVKPEDKKEEK- 653
Query: 1954 LESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEE-RSPKKKEAPSIRRRSTRN 2012
E + V + D + I +K +P+K ++V + KEE + PKK+ + +
Sbjct: 654 -EKPKKEVAKKEDKTPI-KKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKK 711
Query: 2013 TPAKSENVDVGK------------PALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRS 2060
K E +V K P K P E + K K+ KK ES +
Sbjct: 712 EVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSV 771
Query: 2061 LHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNEPLFS 2120
+E+ K+ + E + A ++ + + A + P L S
Sbjct: 772 AAGKPKEKGKIKVIKKEGKAAEAVAAAVGTGATTAAVMAAAGIAAIGPAKELEAERSLMS 831
Query: 2121 PASEVPR---KAKAKKIEVPAQLK---ELVSD 2146
++ + + KA++++V +K EL+ D
Sbjct: 832 SPEDLTKDFEELKAEEVDVTKDIKPQLELIED 863
Score = 37.7 bits (86), Expect = 0.13
Identities = 47/269 (17%), Positives = 106/269 (39%), Gaps = 26/269 (9%)
Query: 1867 VTKRTPRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSS 1926
+T + P + + + ++ + LK + PS+ +RK ++ E T
Sbjct: 521 LTGQVPTPVVKQTKLKQRADSRESLKPAAKPLPSKSVRK------ESKEETPEVTKVNHV 574
Query: 1927 DKQLRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDV 1986
+K +++ +V ++ P ++ ++ ++ V ++ + S + + + + DV
Sbjct: 575 EKPPKVESKEKVMVKKDKP--IKTETKPSVTEKEVPSKEEPSPVKAEVAEKQ----ATDV 628
Query: 1987 GSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKK 2046
KA KE+ K+ + ++ + P K K + K EE+ KK
Sbjct: 629 KPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEV------KK 682
Query: 2047 KLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAIL 2106
++ K+ + + +K V +E + KE ++E++ K + + K
Sbjct: 683 EVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKK-----EVKKEEKEPKKEIKK--- 734
Query: 2107 LPDLSEPNNEPLFSPASEVPRKAKAKKIE 2135
LP ++ ++ PL K K K E
Sbjct: 735 LPKDAKKSSTPLSEAKKPAALKPKVPKKE 763
Score = 35.4 bits (80), Expect = 0.64
Identities = 102/528 (19%), Positives = 190/528 (35%), Gaps = 78/528 (14%)
Query: 1244 PGAADDSKLEVFTTPKKCAVPVETEWLKSKD---RTTSFFLNSPEKEHQEMDEGSQSLEK 1300
P S L K AVPV E+ +KD R + ++ P + + E S +
Sbjct: 1340 PTDEKSSHLPTEVIEKPPAVPVSFEFSDAKDENERASVSPMDEPVPDSESPIEKVLSPLR 1399
Query: 1301 LDVSKGNSSV--SITSDETTLEYQDAPSPEDLEETVFTASKPKSSSTALTTNVTEQTEKD 1358
G+ S S S + + A SP + + + S + +T+ Q +++
Sbjct: 1400 SPPLIGSESAYESFLSADDKASGRGAESPFEEKSGKQGSPDQVSPVSEMTSTSLYQDKQE 1459
Query: 1359 GDKDVFASEVTPSDLQKQMGNLEDAETKDLLVAAEAFSELNHLSPVQ------GTEASLC 1412
G FA +K+ ++E ++ L E +L +SP Q G+
Sbjct: 1460 GKSTDFAPIKEDFGQEKKTDDVEAMSSQPALALDER--KLGDVSPTQIDVSQFGSFKEDT 1517
Query: 1413 APSVYEGKIFTQKSKVPVLDEGLTSVETYTPAIRANDNKSMADVLGDGGNSSLTISEGPI 1472
S+ EG + + KS PV DEG+ A D S + + +S+ S P
Sbjct: 1518 KMSISEGTV-SDKSATPV-DEGV-----------AEDTYSHMEGVASVSTASVATSSFPE 1564
Query: 1473 VSERRLNQEVALNLKEDHEVEV------GVLKESVDLPEEKL---------PISDSPPDT 1517
+ ++ + + H EV V++ E ++ P+S SPPD
Sbjct: 1565 PTTDDVSPSLHAEVGSPHSTEVDDSLSVSVVQTPTTFQETEMSPSKEECPRPMSISPPDF 1624
Query: 1518 QEIHVIEQEKLEAQDSGEEARNLSFNELYPSGTLKLQYNFDTIDQQFCDLADNKDTAECD 1577
+ ++ S + + ++ F + P +L + ++ + D
Sbjct: 1625 SPKTAKSRTPVQDHRSEQSSMSIEFGQESPEQSLAMDFSRQSPDHPTVGA---------- 1674
Query: 1578 IAEVDGELFVAQSNFTLILEGEEGEVEPGDFASSDVLPKAA----------NTATEEKLV 1627
G L + ++ T E + P D S + K N +E V
Sbjct: 1675 -----GVLHITENGPT------EVDYSPSDMQDSSLSHKIPPMEEPSYTQDNDLSELISV 1723
Query: 1628 CSGENDNHGQIANLPSAVTSDQKSQKVDTLPYVPEPIKVAIAENLL-DVIKDTRSKEIT- 1685
E A+ PS + S + DTL V P +++ +L + ++ ++++
Sbjct: 1724 SQVEASPSTSSAHTPSQIASPLQE---DTLSDVAPPRDMSLYASLTSEKVQSLEGEKLSP 1780
Query: 1686 -SDTMEQSIHETIPLVSQNIMCPTKLVKSAFKTAQETSTMTMNVSQVD 1732
SD + E+ PL S T VK T +S+ ++ + +
Sbjct: 1781 KSDISPLTPRESSPLYSPTFSDSTSAVKEKTATCHSSSSPPIDAASAE 1828
Score = 33.9 bits (76), Expect = 1.9
Identities = 48/236 (20%), Positives = 91/236 (38%), Gaps = 31/236 (13%)
Query: 2032 LVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATAS-F 2090
+V +L S++ L K +S+ S+E T E+T E+ ++ +
Sbjct: 529 VVKQTKLKQRADSRESL-KPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVM 587
Query: 2091 TKSSRSSRTRSSKAIL---LPDLSEPNN---EPLFSPASEV-PRKAKAKKIEVPAQLKEL 2143
K + +T + ++ +P EP+ E A++V P+ AK K ++ ++K
Sbjct: 588 VKKDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKP- 646
Query: 2144 VSDLSSQFVISPPALRSRQKNTSNKNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASK 2203
+K K K E K+D ++ KPK + ++ K+ K
Sbjct: 647 ----------------EDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKK 690
Query: 2204 NTEKESAWSPPPIEIRLISPLASPADGVKSKPRKTTEVTGTGLGRNRKKLSSYPKQ 2259
+KE P E++ +P VK + +K + + KKL K+
Sbjct: 691 EEKKE-----PKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKK 741
Score = 33.5 bits (75), Expect = 2.4
Identities = 94/583 (16%), Positives = 223/583 (38%), Gaps = 62/583 (10%)
Query: 1652 QKVDTLPYVPEPI---KVAIAENLLDVIKDTRSKEITSDTMEQSIHETIPLVSQNIMCPT 1708
+K+ L ++ +P+ K + V+K T+ K+ +D+ E PL S+++ +
Sbjct: 503 EKLKHLDFLKQPLATQKDLTGQVPTPVVKQTKLKQ-RADSRESLKPAAKPLPSKSVRKES 561
Query: 1709 KLVKSAFKTAQETSTMT-MNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKM 1767
K +ET +T +N + V SK + ++ + + ++ +V + +
Sbjct: 562 K---------EETPEVTKVNHVEKPPKVESKEKVMVKKDKPIKTETKPSVTEKEVPSKEE 612
Query: 1768 PG----QSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDIL 1823
P + K+ K + + + + + ++++ + P++ KKE I
Sbjct: 613 PSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKK--EEKEKPKKEVAKKEDKTPIK 670
Query: 1824 ENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQE 1883
+ ++E++ +E K+ + + + +ET KEVK K + K+ V+ +E
Sbjct: 671 KEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVK-----KEVKKEEKKEVKKEE 725
Query: 1884 SVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDK--SSDKQLRIKHVRRVRGR 1941
P + I+KL DA +++ + K ++ K K V+
Sbjct: 726 K-------------EPKKEIKKLPK---DAKKSSTPLSEAKKPAALKPKVPKKEESVKKD 769
Query: 1942 EVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKE 2001
V+ +E ++ + +A ++A + + + + +E ++
Sbjct: 770 SVAAGKPKEKGKIKVIKKEGKAAEAVAAAVGTGATTAAVMAAAGIAAIGPAKELEAERSL 829
Query: 2002 APSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEE-------LSMVMSSKKKLTKKTES 2054
S + K+E VDV K + L+ +EE + + K++ K +
Sbjct: 830 MSSPEDLTKDFEELKAEEVDVTKDIKPQLELIEDEEKLKETEPVEAYVIQKEREVTKGPA 889
Query: 2055 QSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPN 2114
+S + + E E T +E E++ + + + SS+ +
Sbjct: 890 ESPDEGITTTEGEGECEQTPEELEPVEKQGVDDIEKFEDEGAGFEESSE-------TGDY 942
Query: 2115 NEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNKNKLEDE 2174
E + +E P + + + V A D S + +R ++++ ++ + +E
Sbjct: 943 EEKAETEEAEEPEEDGEEHVCVSASKHSPTEDEESAKAEADAYIREKRESVASGDDRAEE 1002
Query: 2175 LKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSPPPIE 2217
D+A + K +A++ ++ +E + P +E
Sbjct: 1003 DMDEA-----IEKGEAEQSEEEADEEDKAEDAREEEYEPEKME 1040
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 51.6 bits (122), Expect = 9e-06
Identities = 84/523 (16%), Positives = 203/523 (38%), Gaps = 71/523 (13%)
Query: 1710 LVKSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMPG 1769
L K +ET + + ++ S + +GQ+ + + E D
Sbjct: 67 LEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELED-------- 118
Query: 1770 QSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQNSV-TPRRGRRKKEVNQDILENTSS 1828
K K+K+ ++ +YS ++P+ + ++ +K + +++ +N+
Sbjct: 119 -----KDSKSKKTAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKK 173
Query: 1829 VEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQESVEII 1888
+++ +I + ES +S + L+ ++K K + K P I+ E+ ++
Sbjct: 174 IKERSRINSSGESGD-ESDEFLQ------SRKGQKKNQKNKPGPN-IESGNEDDDA---- 221
Query: 1889 NDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDV 1948
K+ TV + E K+D++ + +R+++ +E +
Sbjct: 222 -SFKIKTVAQKKA----------EKKERERKKRDEEKAK-------LRKLKEKEELETGK 263
Query: 1949 REDSNLESSQLTVQAE-------FDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKE 2001
++ S + SQ + E D IP + +ED K++ KKK
Sbjct: 264 KDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKG 323
Query: 2002 APSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSL 2061
+ + + P+K+ V + AL K + EE ++++ + E +++++
Sbjct: 324 EKEEKEKEKKKGPSKA-TVKAMQEALAK---LKEEEERQKREEEERIKRLEELEAKRKEE 379
Query: 2062 HSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDL---------SE 2112
+ +E+ + KE +E TKS R +R R+ + L S
Sbjct: 380 ERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSL 439
Query: 2113 PNNEPLF--SPASEVPRKAKAKKIEVPAQL---KELVSDLSSQFVISPPALRSRQKNTSN 2167
P P++ ++P++ ++K++ +L E++ + +PP + ++ +
Sbjct: 440 PKKRPIYEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTE 499
Query: 2168 KNKLED--ELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKE 2208
L+D + D ++ + G ++ + ++ + E+E
Sbjct: 500 DAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEE 542
Score = 32.7 bits (73), Expect = 4.2
Identities = 64/359 (17%), Positives = 126/359 (35%), Gaps = 47/359 (13%)
Query: 1737 SKTRTRGQRIQNVNVKSAQQEASADVATPKMPGQSVRKKTRKAKEISEASENIYSDVRGL 1796
SK + ++ + VKS V T +P + +T A E + D +
Sbjct: 267 SKQKESQRKFEEETVKS-----KVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKK 321
Query: 1797 SQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEE 1856
++ + ++G K V + E + +++E + E +R+K + LE +E
Sbjct: 322 KGEKE--EKEKEKKKGPSKATVKA-MQEALAKLKEEEERQKREEEERIKRLEELEAKRKE 378
Query: 1857 TTKKEVKVSSVTKRTPRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASEN 1916
+ E + R K+ E + + + K+ +T R R L +
Sbjct: 379 EERLE--------QEKRERKKQKEKERKERLKKEGKL--LTKSQREARARAEATLKLLQA 428
Query: 1917 TGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGR 1976
G + K S + R + + R+ P + ES +L E +P K
Sbjct: 429 QGVEVPSKDSLPKKR--PIYEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEET 486
Query: 1977 PRKINPSED-----------------------VGSKA-VKEERSPKKKEAPSIRRRSTRN 2012
P + P E+ G+K ++ + +P+++E
Sbjct: 487 PPPVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEE 546
Query: 2013 TPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDE 2071
+ + E + + G +E++S S K L KK + S + ++RT E
Sbjct: 547 SEEEEEEEGESEGSEGDE---EDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKE 602
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 50.4 bits (119), Expect = 2e-05
Identities = 96/448 (21%), Positives = 167/448 (37%), Gaps = 52/448 (11%)
Query: 1773 RKKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVEQE 1832
+++ + K S ++ D R + + + R RR+K + +S V +E
Sbjct: 133 QRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRE 192
Query: 1833 LQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQESVEIINDLK 1892
+ + R + S+ PA E KKE +TP + SV+ + +
Sbjct: 193 RKRSHSRSPRHRTKSRSPSPAPE---KKE--------KTPELPEPSVK-------VKEPS 234
Query: 1893 VSTVTSPSRMIRKLRSTNL-DASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVRED 1951
V TS S +++ + + + E + K K +K+ K R R R S S R
Sbjct: 235 VQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKE---KTRPRSRSRSKSRSRTRSR 291
Query: 1952 SNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTR 2011
S + S PR+R PR+ PS + + P+ + + S RR R
Sbjct: 292 SPSHTRPRRRHRSRSRSYSPRRRPSPRR-RPSPRRRTPPRRMPPPPRHRRSRSPVRRRRR 350
Query: 2012 NTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERT-- 2069
++ + S + + +S P + S +K + + S S R H S T
Sbjct: 351 SSASLSGSSSSSSSSRSRS--PPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPP 408
Query: 2070 DEMTHKETNEQEERLLATASFTKSSRSSRT--RSSKAILLPDLSEPNNEPLFSPASEVPR 2127
+ H T +Q R T+ SR S + R+S + +E P SPA + PR
Sbjct: 409 PKTRHSPTPQQSNR-------TRKSRVSVSPGRTSGKVTKHKGTEKRESP--SPAPK-PR 458
Query: 2128 KAKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNKNKLEDELKDDAQSVETLGK 2187
K +L E D + + + RQ N+ D + E +
Sbjct: 459 K---------VELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDE---R 506
Query: 2188 PKAKRIRTSKTKQASKNTEKESAWSPPP 2215
PK ++ + + +++ SA SP P
Sbjct: 507 PKRSHVKNGEVGRRRRHSPSRSA-SPSP 533
Score = 41.6 bits (96), Expect = 0.009
Identities = 74/327 (22%), Positives = 126/327 (38%), Gaps = 62/327 (18%)
Query: 1912 DASENTGNKQDDKSS-DKQLRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAI 1970
D ++ +K++ +SS +K+ R + RR + R SP SS + + + S
Sbjct: 148 DEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSP-------RRRSSPVRRERKRSHSRS 200
Query: 1971 PRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRR--STRNTPAKSENVDVGKPALG 2028
PR R + R +P+ + K+E++P+ E PS++ + S + + S+ + V KP
Sbjct: 201 PRHRTKSRSPSPAPE------KKEKTPELPE-PSVKVKEPSVQEATSTSDILKVPKP--- 250
Query: 2029 KSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATA 2088
+ I P E S K+K +KT +S+ RS S RT + T + +
Sbjct: 251 EPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSK---SRSRTRSRSPSHTRPRRRHRSRSR 307
Query: 2089 SFTKSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLS 2148
S++ R S P P SP P +++ P + + S
Sbjct: 308 SYSPRRRPS---------------PRRRP--SPRRRTP----PRRMPPPPRHRRSRS--- 343
Query: 2149 SQFVISPPALRSRQKNTSNKNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKE 2208
P R R+ + S + S + PK RTS + T +
Sbjct: 344 -------PVRRRRRSSASLSGS-----SSSSSSSRSRSPPKKPPKRTSSPP---RKTRRL 388
Query: 2209 SAWSPPPIEIRLISPLASPADGVKSKP 2235
S + PP SP A+P + P
Sbjct: 389 SPSASPPRRRHRPSPPATPPPKTRHSP 415
Score = 39.7 bits (91), Expect = 0.034
Identities = 79/407 (19%), Positives = 149/407 (36%), Gaps = 49/407 (12%)
Query: 1764 TPKMPGQSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQ-NSVTPRRGRRKKEVNQDI 1822
TP++P SV+ K +E + S D+ + + + IP+ +P + +K++ +
Sbjct: 220 TPELPEPSVKVKEPSVQEATSTS-----DILKVPKPEPIPEPKEPSPEKNSKKEKEKEKT 274
Query: 1823 LENTSSVEQELQITTGRES-----KRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKR 1877
+ S + T R +R S+ + + S + PRR+
Sbjct: 275 RPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPP 334
Query: 1878 SVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQ---LRIKH 1934
++ S SP R R+ S +L S ++ + +S K+
Sbjct: 335 PPRHRRS------------RSPVRR-RRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP 381
Query: 1935 VRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVG--SKAVK 1992
R+ R S S R + S T + S P++ R RK S G S V
Sbjct: 382 PRKTRRLSPSASPPRR-RHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVT 440
Query: 1993 EERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKT 2052
+ + +K+E+PS + + ++SE GK A S+ +++ ++
Sbjct: 441 KHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSV-----------QQRRQYRRQN 489
Query: 2053 ESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSE 2112
+ S S SE+ + +H + E R + S +S S R R + +
Sbjct: 490 QQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS-RSASPSPRKRQKE-------TS 541
Query: 2113 PNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALR 2159
P SP+ R+ ++ P + + + + SPP R
Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRR 588
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 50.1 bits (118), Expect = 3e-05
Identities = 86/441 (19%), Positives = 165/441 (37%), Gaps = 60/441 (13%)
Query: 1769 GQSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDILENTSS 1828
GQ V ++ K ++A+ +++VR LS + IP++ V KKE + ++SS
Sbjct: 147 GQEVVREIENQK--TDAASKPFAEVRILSCGELIPKSKV-------KKEEKKRHKSSSSS 197
Query: 1829 VEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQESVEII 1888
+ +S+ S E A EE +KK K R ++ K+ + +
Sbjct: 198 SSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSASS 257
Query: 1889 NDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDV 1948
+ P +R + + K K+ +K+ K+ R R RE +P +
Sbjct: 258 ESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPKADEKER--KNRERERERECNPPN- 314
Query: 1949 REDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRR 2008
+ A + + + GR K R P++ PS R
Sbjct: 315 -----------SQPASYQRRLLVTRSGRKIK--------------GRGPRRYRTPS--RS 347
Query: 2009 STRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEER 2068
+R+ +SE + + ++ M +SS ++ K K L+ + E +
Sbjct: 348 RSRDRFRRSETPPHWRQEMQRA-------QRMRVSSGERWIK-----GDKSELNEIKENQ 395
Query: 2069 TDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRK 2128
+ KE + R ++ + K+ + + + K+ N+E ++V ++
Sbjct: 396 RSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKR 455
Query: 2129 AKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNKNKLEDELKDDAQSVETLGKP 2188
AK+K + + S +RSR K ++N E E + D+
Sbjct: 456 AKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDS--------- 506
Query: 2189 KAKRIRTSKTKQASKNTEKES 2209
K K S++K+ SK E +S
Sbjct: 507 KGKDQERSRSKEKSKQLESKS 527
Score = 40.4 bits (93), Expect = 0.020
Identities = 66/333 (19%), Positives = 129/333 (38%), Gaps = 48/333 (14%)
Query: 1781 EISEASENIYSDVRGLSQNQQIPQN-SVTPRRGRRKKEVNQDILENTSSVEQELQITTGR 1839
E++E EN S VR + +N S +P R K++ +D ++S E++++ + +
Sbjct: 387 ELNEIKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKD--HKSNSKERDIRRNSEK 444
Query: 1840 ESK-----RLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIK-----RSVENQESVEIIN 1889
+ K + ++ +E +K + + S + +R++ R EN + E +
Sbjct: 445 DDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQS 504
Query: 1890 DLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVR 1949
D K SR K + ++E+ +K +K Q R + +G+ S R
Sbjct: 505 DSKGKD-QERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTR 563
Query: 1950 EDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRS 2009
E S V++ R R R SK R + + R R
Sbjct: 564 ERSRSRDRSRRVRSR------THDRDRSR---------SKEYHRYREQEYRRRGRSRSRE 608
Query: 2010 TRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERT 2069
R P +S + D + + +++ ESQS+ + + E ++
Sbjct: 609 RRTPPGRSRSKDRRR-----------------RRRDSRSSEREESQSRNKDKYRNQESKS 651
Query: 2070 DEMTHKETNEQEERLLATASFTKSSRSSRTRSS 2102
KE +E E+R+ + + SS +SR + +
Sbjct: 652 SH--RKENSESEKRMYSKSRDHNSSNNSREKKA 682
Score = 34.7 bits (78), Expect = 1.1
Identities = 55/287 (19%), Positives = 108/287 (37%), Gaps = 17/287 (5%)
Query: 1774 KKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVEQEL 1833
KK K+K S++ E S R N+ + + +GR + V + ++ S
Sbjct: 453 KKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSK----- 507
Query: 1834 QITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQESVEIINDLKV 1893
G++ +R +S + + ++ + + S R + R + + N
Sbjct: 508 ----GKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTR 563
Query: 1894 STVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGREVSPSDVREDSN 1953
S R R++RS D + + +K+ + +++ R + R R R P R
Sbjct: 564 ERSRSRDRS-RRVRSRTHD-RDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDR 621
Query: 1954 LESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNT 2013
+ + +E + S K K E S + S K+ + S S+ N+
Sbjct: 622 RRRRRDSRSSEREESQSRNK----DKYRNQESKSSHRKENSESEKRMYSKSRDHNSSNNS 677
Query: 2014 PAKSENVDVGKPALGKSILVPNEELSMVMSSK--KKLTKKTESQSQK 2058
K + D + K NE S ++ +K +K+ E ++QK
Sbjct: 678 REKKADRDQSPFSKIKQSSQDNELKSSMLKNKEDEKIRSSVEKENQK 724
>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
[Homo sapiens]
Length = 1828
Score = 50.1 bits (118), Expect = 3e-05
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 2041 VMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTR 2100
+M +K K ++ S S HS SEE + + ++ ++ + ++S+ SS +
Sbjct: 1 MMRNKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESS 60
Query: 2101 SSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRS 2160
S+ SE +E S + V +AK K PA KE ++D+ + P
Sbjct: 61 ESQ-------SESESESAGSKSQPVLPEAKEK----PASKKERIADVKKMWEEYPDVYGV 109
Query: 2161 RQKNTSNKNKLEDELKDDAQSVETLGKPKAKRIR----TSKTKQASKNTEKESAWS---- 2212
R+ N S + +K++A S G PK + R K KQ E+E S
Sbjct: 110 RRSNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQEPSEDEQEQGTSAESE 169
Query: 2213 PPPIEIRLISPL---ASPADGVKSKPRKTTEVTGTGLGRNRKKLSS 2255
P +++ P+ P VK +P+ T G+ +K+ SS
Sbjct: 170 PEQKKVKARRPVPRRTVPKPRVKKQPK-------TQRGKRKKQDSS 208
>gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]
Length = 1226
Score = 50.1 bits (118), Expect = 3e-05
Identities = 105/516 (20%), Positives = 199/516 (38%), Gaps = 88/516 (17%)
Query: 1703 NIMCPTKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADV 1762
N+ C K F+ ++ + ++ + VV+ + + +NV ++E ++
Sbjct: 381 NVKCAYKKYLYGFEEYCRSANIEFQMALPEKVVNKQCK----ECENVKEIKVKEENETEI 436
Query: 1763 ATPKMPGQS--VRKKTRKAKEISEASENIYSDVRGLSQN--QQIPQNSVTPRRGRRKKEV 1818
KM + + ++ + ++ E ENI + G +N + IP +S + KK
Sbjct: 437 KEIKMEEERNIIPREEKPIEDEIERKENIKPSL-GSKKNLLESIPTHSDQEKEVNIKKPE 495
Query: 1819 NQDILEN----TSSVEQELQITTGRESKRLKSS--------QLLEPAVEETTK------- 1859
+ + L++ T+ V++ L I E ++ KS +++ PA + K
Sbjct: 496 DNENLDDKDDDTTRVDESLNIKVEAEEEKAKSGYDEWIKADKIVRPADKNVPKIKHRKKI 555
Query: 1860 ---------KEVKVSSVTKRTPRRIKRSVENQESVEIINDLKVSTV-TSPSRMIRKLRST 1909
K+ K S + R K + S E+++ L ++ S + I+ + T
Sbjct: 556 KNKLDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKLDLTDAKNSDTAHIKSIEIT 615
Query: 1910 N----LDASENT----------GNKQDDKSSDKQLRIKHVRRVRGREVSPSDVREDSNLE 1955
+ L ASE++ G + D + ++ +I H+ R +S + S LE
Sbjct: 616 SILNGLQASESSAEDSEQEDERGAQDMDNNGKEESKIDHLTNNRNDLISKEEQNSSSLLE 675
Query: 1956 SSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPA 2015
++ V A+ +S K P ++ +V + E+ ++ E R+ ++T
Sbjct: 676 ENK--VHADLVISKPVSKS--PERLRKDIEV----LSEDTDYEEDEVTKKRKDVKKDTTD 727
Query: 2016 KSENVDVGKPALGKSILVPNEELSMVMSSKKK--LTKKTESQSQKRSLHSVSEERTDEMT 2073
KS + + GK EE S KK K ES + S +S S+E +E
Sbjct: 728 KSSKPQIKR---GKRRYCNTEECLKTGSPGKKEEKAKNKESLCMENSSNSSSDEDEEETK 784
Query: 2074 HKETN-------EQEERLLATASF------TKSSRSSRTRSSKAILLPDLSEPNNEPLFS 2120
K T E++ + L T F R +S L ++ + S
Sbjct: 785 AKMTPTKKYNGLEEKRKSLRTTGFYSGFSEVAEKRIKLLNNSDERLQNSRAKDRKDVWSS 844
Query: 2121 PASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPP 2156
+ P+K LKEL SD ++ SPP
Sbjct: 845 IQGQWPKKT----------LKELFSDSDTEAAASPP 870
>gi|110611184 chromodomain helicase DNA binding protein 2 isoform 2
[Homo sapiens]
Length = 501
Score = 50.1 bits (118), Expect = 3e-05
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 2041 VMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTR 2100
+M +K K ++ S S HS SEE + + ++ ++ + ++S+ SS +
Sbjct: 1 MMRNKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESS 60
Query: 2101 SSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRS 2160
S+ SE +E S + V +AK K PA KE ++D+ + P
Sbjct: 61 ESQ-------SESESESAGSKSQPVLPEAKEK----PASKKERIADVKKMWEEYPDVYGV 109
Query: 2161 RQKNTSNKNKLEDELKDDAQSVETLGKPKAKRIR----TSKTKQASKNTEKESAWS---- 2212
R+ N S + +K++A S G PK + R K KQ E+E S
Sbjct: 110 RRSNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQEPSEDEQEQGTSAESE 169
Query: 2213 PPPIEIRLISPL---ASPADGVKSKPRKTTEVTGTGLGRNRKKLSS 2255
P +++ P+ P VK +P+ T G+ +K+ SS
Sbjct: 170 PEQKKVKARRPVPRRTVPKPRVKKQPK-------TQRGKRKKQDSS 208
>gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 1430
Score = 49.7 bits (117), Expect = 3e-05
Identities = 126/619 (20%), Positives = 217/619 (35%), Gaps = 66/619 (10%)
Query: 1613 VLPKAANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPYVPEPIKVAIAENL 1672
+L + A T++K EN + N S Q ++K+D + + + E+
Sbjct: 121 LLDRFAQAVTKDKFALESENISEPYFTN--RRTISQQSAEKLDAACGIDKTENGTLFEDQ 178
Query: 1673 LDVIKDTRSKEITSDTMEQSIHETIPLVSQNIMCPTKLVKSAFKTAQETSTMTMNVSQVD 1732
+V K+ ++ T S E PL + + K + ST + +D
Sbjct: 179 -NVDKEGKALPATGQKANVS-PEQPPLFTHTV-----------KDSDHISTRFLG--SMD 223
Query: 1733 DVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMP--GQSVRKKTRKAKEISEASE--- 1787
+ SS+ + + + +K A + A + P G+ +K K S+ +
Sbjct: 224 SLTSSEESSERPPLSTLTLKEADPSSKAAMRRKDSPPPGKVSSQKQPAEKATSDDKDSVS 283
Query: 1788 NIYSDVR-----GLSQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVEQELQITTGRESK 1842
NI ++++ G +Q+ P T + +I E S Q + +
Sbjct: 284 NIATEIKEGPISGTVSSQKQPAEKATSDEKDSVSNIATEIKEGQQSGTVSPQKQSAWKVI 343
Query: 1843 RLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVENQE---SVEIINDLKVSTVTSP 1899
K LL A T + S K+ P + + + EI + L+ TV+S
Sbjct: 344 FKKKVSLLNIATRITGGGKSGTVSSQKQPPSKATSDKTDSALNIATEIKDGLQCGTVSSQ 403
Query: 1900 SRMIRKLRSTNLDASENT------GNKQDDKSSDKQLRIKHVRRVRGREVSPSDVREDSN 1953
+ K + D+ N G K SS KQ +K + EDS
Sbjct: 404 KQPALKATTDEEDSVSNIATEIKDGEKSGTVSSQKQPALK-----------ATTDEEDSV 452
Query: 1954 LESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNT 2013
L + E + +K+ + ED S E + +K S R++
Sbjct: 453 LNIATEIKDGEKSETVSSQKQPALKATTDEEDSVSIIATEIKDGEKSGTVSSRKK----- 507
Query: 2014 PAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMT 2073
PA D + + E+S +SS+K K S + L EE+ E +
Sbjct: 508 PALKATSDEKDSFSNITREKKDGEISRTVSSQKPPALKATSDEEDSVLSIAREEKDGEKS 567
Query: 2074 HKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNEPLFSPASE----VPRKA 2129
++EQ L AT K S + R K + +P S+ VP A
Sbjct: 568 RTVSSEQPPGLKATRD-EKDSLLNIARGKKYGEKTRRVSSHKQPALKATSDKENSVPNMA 626
Query: 2130 KAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNKNKLEDELKDDAQSVETLGKPK 2189
K E ++ +SSQ PAL++ + + + E+KD QS + +
Sbjct: 627 TETKDE------QISGTVSSQ---KQPALKATSDKKDSVSNIPTEIKDGQQSGTVSSQKQ 677
Query: 2190 AKRIRTSKTKQASKNTEKE 2208
TS K + N E
Sbjct: 678 LAWKATSVKKDSVSNIATE 696
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 49.7 bits (117), Expect = 3e-05
Identities = 92/473 (19%), Positives = 170/473 (35%), Gaps = 53/473 (11%)
Query: 1716 KTAQETSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVK---SAQQEASADVATPKMPGQSV 1772
K +E S ++D + Q Q+ N K S ++ + +PK +
Sbjct: 218 KETKEGSVAVQIPDLLEDKAQKLSFCEDQNAQDRNSKGSDSLNKKVDLTLLSPKSENDKL 277
Query: 1773 RK-----KTRKAKEISEASENIYSDVRGLSQNQQIPQNSV-------TPRRGRRKKEVNQ 1820
++ K + + +S + I SD L + P + V T +G R E
Sbjct: 278 KEISLACKITELESVSLPTPEIQSDF--LHSKVEAPPSEVADTLVIMTASKGVRLPEPKD 335
Query: 1821 DILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVE 1880
ILE + ++ + T E K+ S++ EP K ++ + TP K +++
Sbjct: 336 KILETPQKMTEKSESKTPGEGKKEDKSRMAEPM-----KGYMRPTKSRGLTPLLPKSTIQ 390
Query: 1881 NQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRG 1940
QE + LK + + P + T D + NK+ S +K+ + +
Sbjct: 391 EQERHK---QLKSAGIARPEEGRPVVSGTGNDIT-TPPNKELPPSPEKKTKPLATTQPAK 446
Query: 1941 REVSPSDVREDS-----------NLESSQLTVQAEFDMSAIPRK----RGRPRKINPSED 1985
S + + S L +++ + +A P++ RP I PS+D
Sbjct: 447 TSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARP-SILPSKD 505
Query: 1986 VGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILV--PNEELSMVMS 2043
V K + + ++P+K+ +PS + + V K ++ P+ +
Sbjct: 506 VKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLL 565
Query: 2044 SKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSK 2103
KK KTE + + + D K T+ + T S T + K
Sbjct: 566 PKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVK 625
Query: 2104 AILLPDLSEPNNEPLF-------SPASEVPRKAKAKKIEVPAQLKELVSDLSS 2149
A +P S P+ P P+S PR ++ LK + S + S
Sbjct: 626 ATPMP--SRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGS 676
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sapiens]
Length = 887
Score = 49.7 bits (117), Expect = 3e-05
Identities = 92/473 (19%), Positives = 170/473 (35%), Gaps = 53/473 (11%)
Query: 1716 KTAQETSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVK---SAQQEASADVATPKMPGQSV 1772
K +E S ++D + Q Q+ N K S ++ + +PK +
Sbjct: 218 KETKEGSVAVQIPDLLEDKAQKLSFCEDQNAQDRNSKGSDSLNKKVDLTLLSPKSENDKL 277
Query: 1773 RK-----KTRKAKEISEASENIYSDVRGLSQNQQIPQNSV-------TPRRGRRKKEVNQ 1820
++ K + + +S + I SD L + P + V T +G R E
Sbjct: 278 KEISLACKITELESVSLPTPEIQSDF--LHSKVEAPPSEVADTLVIMTASKGVRLPEPKD 335
Query: 1821 DILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPRRIKRSVE 1880
ILE + ++ + T E K+ S++ EP K ++ + TP K +++
Sbjct: 336 KILETPQKMTEKSESKTPGEGKKEDKSRMAEPM-----KGYMRPTKSRGLTPLLPKSTIQ 390
Query: 1881 NQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRG 1940
QE + LK + + P + T D + NK+ S +K+ + +
Sbjct: 391 EQERHK---QLKSAGIARPEEGRPVVSGTGNDIT-TPPNKELPPSPEKKTKPLATTQPAK 446
Query: 1941 REVSPSDVREDS-----------NLESSQLTVQAEFDMSAIPRK----RGRPRKINPSED 1985
S + + S L +++ + +A P++ RP I PS+D
Sbjct: 447 TSTSKAKTQPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARP-SILPSKD 505
Query: 1986 VGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILV--PNEELSMVMS 2043
V K + + ++P+K+ +PS + + V K ++ P+ +
Sbjct: 506 VKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLL 565
Query: 2044 SKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSK 2103
KK KTE + + + D K T+ + T S T + K
Sbjct: 566 PKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKTTTLSGTAPAAGVVPSRVK 625
Query: 2104 AILLPDLSEPNNEPLF-------SPASEVPRKAKAKKIEVPAQLKELVSDLSS 2149
A +P S P+ P P+S PR ++ LK + S + S
Sbjct: 626 ATPMP--SRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGS 676
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 49.7 bits (117), Expect = 3e-05
Identities = 103/511 (20%), Positives = 182/511 (35%), Gaps = 117/511 (22%)
Query: 1814 RKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTPR 1873
RKKE+++D E E+++Q + K ++ E E+ KK + K+
Sbjct: 139 RKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGKEKVREK--EKPEKKATHKEKIEKKEKP 196
Query: 1874 RIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIK 1933
K + Q+ K T +K E G KQ+ K ++K
Sbjct: 197 ETKTLAKEQK--------KAKTAEKSEEKTKK---------EVKGGKQE-KVKQTAAKVK 238
Query: 1934 HVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPR--------------------- 1972
V++ +PS +E + E + ++ + D A R
Sbjct: 239 EVQK------TPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPAIPP 292
Query: 1973 -----KRGRPRKINPS--EDVGSKAVKEER---SPKKKEAPSIRRRSTRNTPAKSENVDV 2022
+ RP +P+ E G K E++ KKKE I+++S + T +DV
Sbjct: 293 PLPTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETA-----IDV 347
Query: 2023 GKPALGKSILVPNEELSMVMSS------KKKLTKKTESQSQKRSLHSVSEER-------- 2068
K GK+ + + + KK+ +KKT+ ++ +E+
Sbjct: 348 EKKEPGKASETKQGTVKIAAQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPA 407
Query: 2069 ----------TDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNEPL 2118
+D+ +T +E + A + +++K + E + +
Sbjct: 408 KSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKTS 467
Query: 2119 FSPASEVPRKAKAKKIEVPAQLK---------ELVSDLSSQFVISPPALRSRQKNTSNKN 2169
+ P K K +K VPA LK E +S + PP L+ ++ +
Sbjct: 468 SILKDKEPIKGKEEK--VPASLKEKEPETKKDEKMSKAGKEVKPKPPQLQGKK-----EE 520
Query: 2170 KLEDELKDDAQSV--ETLGKPKAKRIRTSKTKQASKNTEK----------ESAWSPPP-- 2215
K E ++K +A+ E + K ++ KT K EK E P P
Sbjct: 521 KPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHGKPEEKVLKQVKAVTIEKTAKPKPTK 580
Query: 2216 -IEIRLISPLASPADGVKSKPRKTTEVTGTG 2245
E R P + D K P+ T+EVT +G
Sbjct: 581 KAEHREREPPSIKTDKPKPTPKGTSEVTESG 611
Score = 43.9 bits (102), Expect = 0.002
Identities = 77/397 (19%), Positives = 153/397 (38%), Gaps = 41/397 (10%)
Query: 1636 GQIANLPSAVTSDQKSQKVDTLPYVPEPIKVAIAENLLDVIKDTRSKEITSDTMEQSIHE 1695
GQ +P + ++Q S+ P P A+ E + K K++TS+T ++ E
Sbjct: 285 GQSPAIPPPLPTEQASR--------PTPASPALEEK--EGEKKKAEKKVTSETKKKE-KE 333
Query: 1696 TIPLVSQN---IMCPTKLVKSAFKTAQETSTMTMNVSQVDDVV---SSKTRTRGQRIQNV 1749
I S+ I K A +T Q T + + D S KT+ + Q
Sbjct: 334 DIKKKSEKETAIDVEKKEPGKASETKQGTVKIAAQAAAKKDEKKEDSKKTKKPAEVEQPK 393
Query: 1750 NVKSAQQEASADVATPKMPGQSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTP 1809
K ++E + A SV K++ +E ++ +S + +P
Sbjct: 394 GKKQEKKEKHVEPAKSPKKEHSVPSD----KQVKAKTERAKEEIGAVSIKKAVPGKKEEK 449
Query: 1810 RRGRRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTK 1869
++E+ ++ TSS+ ++ + G+E K S + EP TKK+ K+S K
Sbjct: 450 TTKTVEQEIRKEKSGKTSSILKDKEPIKGKEEKVPASLKEKEP----ETKKDEKMSKAGK 505
Query: 1870 RT---PRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDD--- 1923
P +++ E + +I + K S I K + + + G ++
Sbjct: 506 EVKPKPPQLQGKKEEKPEPQIKKEAK--PAISEKVQIHKQDIVKPEKTVSHGKPEEKVLK 563
Query: 1924 ----KSSDKQLRIKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRK 1979
+ +K + K ++ RE P ++ D + T + +++ +K+ +
Sbjct: 564 QVKAVTIEKTAKPKPTKKAEHREREPPSIKTD----KPKPTPKGTSEVTESGKKKTEISE 619
Query: 1980 INPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAK 2016
E K ++EE+ +KE+ + + PA+
Sbjct: 620 KESKEKADMKHLREEKVSTRKESLQLHNVTKAEKPAR 656
>gi|117676384 splicing factor, arginine/serine-rich 2, interacting
protein [Homo sapiens]
Length = 1463
Score = 48.5 bits (114), Expect = 7e-05
Identities = 100/528 (18%), Positives = 197/528 (37%), Gaps = 90/528 (17%)
Query: 1618 ANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPYVPEPI--KVAIAENLLDV 1675
AN TEE++ G + + +LP V + + +K++ + + I+EN+L+
Sbjct: 462 ANYDTEERV---GSSSSESCAQDLPVLVGEEGEVKKLENTGIEANVLCLESEISENILEK 518
Query: 1676 IKDTRSKEITSDTMEQSIHET-IPLVSQNIMCPTKLVKSAFKTAQETSTMTMNVSQ-VDD 1733
D K+ + QS +T + V PT L + K Q S ++S+ V+
Sbjct: 519 GGDPLEKQDQISGLSQSEVKTDVCTVHLPNDFPTCLTSES-KVYQPVSCPLSDLSENVES 577
Query: 1734 VVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMPG------QSVRKKTRKAKEISEASE 1787
VV+ + T ++ K + + +PK+ Q+V +++ K+ E+
Sbjct: 578 VVNEEKITESSLVEITEHKDFTLKTEELIESPKLESSEGEIIQTVDRQSVKSPEVQLLGH 637
Query: 1788 NIYSDVRGL----------------SQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVE- 1830
DV + S+N + N + + + +E N+ + E+ S E
Sbjct: 638 VETEDVEIIATCDTFGNEDFNNIQDSENNLLKNNLLNTKLEKSLEEKNESLTEHPRSTEL 697
Query: 1831 -----QELQITTGRESKRLKSSQLLEPAVEETTKKEVKVS---SVTKRTPRRIKRSVENQ 1882
+++Q ++ + + + + + EV+ S + + + EN
Sbjct: 698 PKTHIEQIQKHFSEDNNEMIPMEC-DSFCSDQNESEVEPSVNADLKQMNENSVTHCSENN 756
Query: 1883 ESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRVRGRE 1942
+ D KV TV+ PS + D + K R R R
Sbjct: 757 MPSSDLADEKVETVSQPS----------------------ESPKDTIDKTKKPRTRRSRF 794
Query: 1943 VSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEA 2002
SPS + P+++ RP+ +P + G ++ K + K E+
Sbjct: 795 HSPSTTWSPNK---------------DTPQEKKRPQSPSPRRETGKESRKSQSPSPKNES 839
Query: 2003 PSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTE-SQSQKRSL 2061
R++S +P K D+ + P + + + L+ + E S+ KRS
Sbjct: 840 ARGRKKSRSQSPKK----DIARERRQSQSRSPKRDTTRESRRSESLSPRRETSRENKRSQ 895
Query: 2062 HSVSEERTDEMTHKETNEQE--------ERLLATASFTKSSRSSRTRS 2101
V + E + ++ E+E ER T +++S SR+ S
Sbjct: 896 PRVKDSSPGEKSRSQSRERESDRDGQRRERERRTRKWSRSRSHSRSPS 943
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 [Homo
sapiens]
Length = 916
Score = 47.8 bits (112), Expect = 1e-04
Identities = 60/323 (18%), Positives = 124/323 (38%), Gaps = 33/323 (10%)
Query: 1950 EDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRS 2009
E S +E + + E +S K+ + + + V ++SP K AP ++
Sbjct: 465 EKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEE 524
Query: 2010 TRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSE-ER 2068
+ + + + KS ++ S K+ ++K E + ++ + +E E
Sbjct: 525 GEKEEEEGQEEEEEEDEGAKS-----DQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEE 579
Query: 2069 TDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRK 2128
+ K+ E+ E + ++ + +K+ P P E SP + P +
Sbjct: 580 AEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKS---PVPKSPVEEKGKSPVPKSPVE 636
Query: 2129 AKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNKNKLEDELK--------DDAQ 2180
K K VP K V + V P + + K+ +K+ +E++ K ++A+
Sbjct: 637 EKGKS-PVP---KSPVEEKGKSPVPKSP-VEEKGKSPVSKSPVEEKAKSPVPKSPVEEAK 691
Query: 2181 SVETLGKPKAKRIRTSKTKQASKNTEKESAWSPP-----------PIEIRLISPLASPAD 2229
S +GK + K + K+A K + E P P++ ++ + +
Sbjct: 692 SKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITK 751
Query: 2230 GVKSKPRKTTEVTGTGLGRNRKK 2252
VK K T+ G L + ++K
Sbjct: 752 SVKVHLEKETKEEGKPLQQEKEK 774
Score = 42.0 bits (97), Expect = 0.007
Identities = 79/438 (18%), Positives = 153/438 (34%), Gaps = 54/438 (12%)
Query: 1816 KEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEE----TTKKEVKVSSVTKRT 1871
++ ++ E +++ +EL ++ E K + EP EE K VK ++ +
Sbjct: 463 EDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKE 522
Query: 1872 PRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLR 1931
K E QE E + D +E G++++ S ++
Sbjct: 523 EEGEKEEEEGQEEEE-----------------EEDEGAKSDQAEEGGSEKEGSSEKEEGE 565
Query: 1932 IKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSA-----IPRKRGRPRKINPSEDV 1986
+ E ++ +E+ +E V + ++ A P K P +P E+
Sbjct: 566 QEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEK 625
Query: 1987 GSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKK 2046
G V + +K ++P KS + GK + KS P EE SK
Sbjct: 626 GKSPVPKSPVEEKGKSP----------VPKSPVEEKGKSPVPKS---PVEEKGKSPVSKS 672
Query: 2047 KLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAIL 2106
+ +K +S K + + E+ E E+EE+ + A + K
Sbjct: 673 PVEEKAKSPVPKSPVEEAKSKA--EVGKGEQKEEEEKEVKEA---PKEEKVEKKEEKPKD 727
Query: 2107 LPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTS 2166
+P+ + + +EV K+ K+ + + KE L + +
Sbjct: 728 VPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEG 787
Query: 2167 NKNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSPPPIEIRLISPLAS 2226
+ + K+D + G+ + K +TK+ E+E +++ S
Sbjct: 788 SDKGAKGSRKED---IAVNGEVEGKEEVEQETKEKGSGREEEKGVVTNGLDL-------S 837
Query: 2227 PADGVKSKPRKTTEVTGT 2244
PAD K + +V T
Sbjct: 838 PADEKKGGDKSEEKVVVT 855
Score = 40.8 bits (94), Expect = 0.015
Identities = 92/472 (19%), Positives = 167/472 (35%), Gaps = 97/472 (20%)
Query: 1478 LNQEVALNLKEDHEVEVGVLKESVDLPEEKLPISDSPPDTQEIHVIEQEKLEAQDSGEEA 1537
+ +E+A+++KE+ + +E + EE++ SP V E+E + ++ G+E
Sbjct: 476 ITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQE- 534
Query: 1538 RNLSFNELYPSGTLKLQYNFDTIDQQFCDLADNKDTAECDIAEVDGELFVAQSNFTLILE 1597
+++ D D AE +E +G E
Sbjct: 535 -----------------------EEEEEDEGAKSDQAEEGGSEKEGS-----------SE 560
Query: 1598 GEEGEVEPGDFASSDVLPKAANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTL 1657
EEGE E G+ + +A A EEK V + ++A V +D K +K
Sbjct: 561 KEEGEQEEGETEAEAEGEEA--EAKEEKKV----EEKSEEVATKEELV-ADAKVEK---- 609
Query: 1658 PYVPEPIKVAIAENLLDVIKDTRSKEITSDTMEQSIHETIPLVSQNIMCPTKLVKSAFKT 1717
PE K + ++ +++ + +E+ +P
Sbjct: 610 ---PEKAKSPVPKS---PVEEKGKSPVPKSPVEEKGKSPVPK----------------SP 647
Query: 1718 AQETSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMPGQSVRKKTR 1777
+E + S V++ S V + E A PK P + + K
Sbjct: 648 VEEKGKSPVPKSPVEEKGKSP------------VSKSPVEEKAKSPVPKSPVEEAKSKAE 695
Query: 1778 KAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDILEN--------TSSV 1829
K E E +V+ + +++ + P+ KK+ + E T SV
Sbjct: 696 VGK--GEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSV 753
Query: 1830 EQELQITTGRESKRLKSSQLLEPAVEETTKKEV---KVSSVTKRTPRRIKRSVENQESVE 1886
+ L+ T E K L+ + E A E +E K + +++ + VE +E VE
Sbjct: 754 KVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVE 813
Query: 1887 IINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRV 1938
K S ++ + LD S K DKS +K + K V ++
Sbjct: 814 QETKEKGSGREEEKGVV----TNGLDLSPADEKKGGDKSEEKVVVTKTVEKI 861
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 [Homo
sapiens]
Length = 540
Score = 47.8 bits (112), Expect = 1e-04
Identities = 60/323 (18%), Positives = 124/323 (38%), Gaps = 33/323 (10%)
Query: 1950 EDSNLESSQLTVQAEFDMSAIPRKRGRPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRS 2009
E S +E + + E +S K+ + + + V ++SP K AP ++
Sbjct: 89 EKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEE 148
Query: 2010 TRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSE-ER 2068
+ + + + KS ++ S K+ ++K E + ++ + +E E
Sbjct: 149 GEKEEEEGQEEEEEEDEGAKS-----DQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEE 203
Query: 2069 TDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRK 2128
+ K+ E+ E + ++ + +K+ P P E SP + P +
Sbjct: 204 AEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKS---PVPKSPVEEKGKSPVPKSPVE 260
Query: 2129 AKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTSNKNKLEDELK--------DDAQ 2180
K K VP K V + V P + + K+ +K+ +E++ K ++A+
Sbjct: 261 EKGKS-PVP---KSPVEEKGKSPVPKSP-VEEKGKSPVSKSPVEEKAKSPVPKSPVEEAK 315
Query: 2181 SVETLGKPKAKRIRTSKTKQASKNTEKESAWSPP-----------PIEIRLISPLASPAD 2229
S +GK + K + K+A K + E P P++ ++ + +
Sbjct: 316 SKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITK 375
Query: 2230 GVKSKPRKTTEVTGTGLGRNRKK 2252
VK K T+ G L + ++K
Sbjct: 376 SVKVHLEKETKEEGKPLQQEKEK 398
Score = 42.0 bits (97), Expect = 0.007
Identities = 79/438 (18%), Positives = 153/438 (34%), Gaps = 54/438 (12%)
Query: 1816 KEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEE----TTKKEVKVSSVTKRT 1871
++ ++ E +++ +EL ++ E K + EP EE K VK ++ +
Sbjct: 87 EDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKE 146
Query: 1872 PRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLR 1931
K E QE E + D +E G++++ S ++
Sbjct: 147 EEGEKEEEEGQEEEE-----------------EEDEGAKSDQAEEGGSEKEGSSEKEEGE 189
Query: 1932 IKHVRRVRGREVSPSDVREDSNLESSQLTVQAEFDMSA-----IPRKRGRPRKINPSEDV 1986
+ E ++ +E+ +E V + ++ A P K P +P E+
Sbjct: 190 QEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEK 249
Query: 1987 GSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGKPALGKSILVPNEELSMVMSSKK 2046
G V + +K ++P KS + GK + KS P EE SK
Sbjct: 250 GKSPVPKSPVEEKGKSP----------VPKSPVEEKGKSPVPKS---PVEEKGKSPVSKS 296
Query: 2047 KLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSRSSRTRSSKAIL 2106
+ +K +S K + + E+ E E+EE+ + A + K
Sbjct: 297 PVEEKAKSPVPKSPVEEAKSKA--EVGKGEQKEEEEKEVKEA---PKEEKVEKKEEKPKD 351
Query: 2107 LPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISPPALRSRQKNTS 2166
+P+ + + +EV K+ K+ + + KE L + +
Sbjct: 352 VPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEG 411
Query: 2167 NKNKLEDELKDDAQSVETLGKPKAKRIRTSKTKQASKNTEKESAWSPPPIEIRLISPLAS 2226
+ + K+D + G+ + K +TK+ E+E +++ S
Sbjct: 412 SDKGAKGSRKED---IAVNGEVEGKEEVEQETKEKGSGREEEKGVVTNGLDL-------S 461
Query: 2227 PADGVKSKPRKTTEVTGT 2244
PAD K + +V T
Sbjct: 462 PADEKKGGDKSEEKVVVT 479
Score = 40.8 bits (94), Expect = 0.015
Identities = 92/472 (19%), Positives = 167/472 (35%), Gaps = 97/472 (20%)
Query: 1478 LNQEVALNLKEDHEVEVGVLKESVDLPEEKLPISDSPPDTQEIHVIEQEKLEAQDSGEEA 1537
+ +E+A+++KE+ + +E + EE++ SP V E+E + ++ G+E
Sbjct: 100 ITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQE- 158
Query: 1538 RNLSFNELYPSGTLKLQYNFDTIDQQFCDLADNKDTAECDIAEVDGELFVAQSNFTLILE 1597
+++ D D AE +E +G E
Sbjct: 159 -----------------------EEEEEDEGAKSDQAEEGGSEKEGS-----------SE 184
Query: 1598 GEEGEVEPGDFASSDVLPKAANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTL 1657
EEGE E G+ + +A A EEK V + ++A V +D K +K
Sbjct: 185 KEEGEQEEGETEAEAEGEEA--EAKEEKKV----EEKSEEVATKEELV-ADAKVEK---- 233
Query: 1658 PYVPEPIKVAIAENLLDVIKDTRSKEITSDTMEQSIHETIPLVSQNIMCPTKLVKSAFKT 1717
PE K + ++ +++ + +E+ +P
Sbjct: 234 ---PEKAKSPVPKS---PVEEKGKSPVPKSPVEEKGKSPVPK----------------SP 271
Query: 1718 AQETSTMTMNVSQVDDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMPGQSVRKKTR 1777
+E + S V++ S V + E A PK P + + K
Sbjct: 272 VEEKGKSPVPKSPVEEKGKSP------------VSKSPVEEKAKSPVPKSPVEEAKSKAE 319
Query: 1778 KAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDILEN--------TSSV 1829
K E E +V+ + +++ + P+ KK+ + E T SV
Sbjct: 320 VGK--GEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSV 377
Query: 1830 EQELQITTGRESKRLKSSQLLEPAVEETTKKEV---KVSSVTKRTPRRIKRSVENQESVE 1886
+ L+ T E K L+ + E A E +E K + +++ + VE +E VE
Sbjct: 378 KVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVE 437
Query: 1887 IINDLKVSTVTSPSRMIRKLRSTNLDASENTGNKQDDKSSDKQLRIKHVRRV 1938
K S ++ + LD S K DKS +K + K V ++
Sbjct: 438 QETKEKGSGREEEKGVV----TNGLDLSPADEKKGGDKSEEKVVVTKTVEKI 485
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 47.8 bits (112), Expect = 1e-04
Identities = 130/759 (17%), Positives = 299/759 (39%), Gaps = 73/759 (9%)
Query: 1473 VSERRLNQEVALNLKEDHEVEVGVLKESVDLPEEKLPISDSPPDTQEIHVIEQEKLEAQD 1532
+ E + QE +LN+KE ++ E E+ DS EI ++ K Q+
Sbjct: 1379 IQESQSKQEQSLNMKEKDNETTKIVSEM-----EQFKPKDSALLRIEIEMLGLSK-RLQE 1432
Query: 1533 SGEEARNLS--------FNELYPSGTLKLQYNFDTIDQQFCDLADNKDTAECDIAEVDGE 1584
S +E ++++ E+ S + +L+ N I + + + A C + E +
Sbjct: 1433 SHDEMKSVAKEKDDLQRLQEVLQSESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEET 1492
Query: 1585 LFVAQSNFTLILEGEEGEVEPGDFASSDVLPKAANTATEEKLVCSGENDNHGQIANLPSA 1644
+ + N + E E ++ A +D L E++ E N QI+ +
Sbjct: 1493 INELRVNLSE-KETEISTIQKQLEAINDKLQNKIQEIYEKE-----EQFNIKQISEVQEK 1546
Query: 1645 VTS-----DQKSQKVDTLPYVPEPIKVAIAENLLDVIKDTRSKEITSDTMEQSIHETIPL 1699
V + + K L + K+ N L ++ I + + E + +
Sbjct: 1547 VNELKQFKEHRKAKDSALQSIES--KMLELTNRLQESQEEIQIMIKEKEEMKRVQEALQI 1604
Query: 1700 VSQNIMCPTKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQR----IQNVNVKSAQ 1755
+ TK + + K +QE + ++ V++ + Q +N+++ +
Sbjct: 1605 ERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIE 1664
Query: 1756 QEASADVATPKMPGQSVRKKTRKAKEISEASENIYSDVRGLSQNQQIPQNSVTPRRGRRK 1815
E + +R T++ ++ E + + L +N + T R K
Sbjct: 1665 TENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLKENLR-----ETITRDLEK 1719
Query: 1816 KE----VNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRT 1871
+E V+ + E+ ++++ I + + ++ + LE + + +++K+ +
Sbjct: 1720 QEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIA 1779
Query: 1872 PRRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTN---------LDASEN---TGN 1919
+K E QE+++ + + S M + L ++N L A+E+ T
Sbjct: 1780 HMHLK---EQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLK 1836
Query: 1920 KQDDKSSDKQLRIKHVRR-VRGREVSPSDVREDSNLESSQLTVQAEFDMSAIPRKRGRPR 1978
K +++ K ++ +++ ++ + ++ S + E NL +Q + +M ++ ++R R
Sbjct: 1837 KDVNETQKKVSEMEQLKKQIKDQSLTLSKL-EIENLNLAQKLHENLEEMKSVMKERDNLR 1895
Query: 1979 KINPSEDVGSKAVKEERSPKKKEAPSIRRR-STRNTPAKS--ENVDVGKPALGKSILVPN 2035
++ + + +KE K I++ T +K E VD + + + + +
Sbjct: 1896 RVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQIS 1955
Query: 2036 EELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFTKSSR 2095
+ + SK +L KK + + QK+ L + + M+HK+ NE E+ K
Sbjct: 1956 DIQKDLDKSKDELQKKIQ-ELQKKELQLLRVKEDVNMSHKKINEMEQ--------LKKQF 2006
Query: 2096 SSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSSQFVISP 2155
++ S +++ + + + L E+ + AK+ + ++KE + QF+ +
Sbjct: 2007 EAQNLSMQSVRMDNFQ--LTKKLHESLEEI--RIVAKERDELRRIKESLKMERDQFIATL 2062
Query: 2156 PALRSRQKNTSNKNKLEDELKDDAQSVETLGKPKAKRIR 2194
+ +R + + L D Q + + K RI+
Sbjct: 2063 REMIARDRQNHQVKPEKRLLSDGQQHLTESLREKCSRIK 2101
Score = 41.6 bits (96), Expect = 0.009
Identities = 129/712 (18%), Positives = 283/712 (39%), Gaps = 83/712 (11%)
Query: 1290 EMDEGSQSLEKLDVSKG--NSSVS------ITSDETTLEYQ-DAPSPEDLEETVFTASKP 1340
E D+ +Q LE+ D+ + N + +TS TL+ + A + + +K
Sbjct: 372 EKDQLAQLLEEKDLLQKVQNEKIENLTRMLVTSSSLTLQQELKAKRKRRVTWCLGKINKM 431
Query: 1341 KSSSTA----LTTNVTEQTEK-------DGDKDVFASEVTPSDLQKQMGNLEDAETKDLL 1389
K+S+ A + TN+T +T K + D+ V + S+ + +E LL
Sbjct: 432 KNSNYADQFNIPTNITTKTHKLSINLLREIDESVCSESDVFSNTLDTLSEIEWNPATKLL 491
Query: 1390 VAAEAFSELNHLSPVQGTEASLCAPSVYEGKIFTQKSKVPVLDEGLTSVETYTPAIRAND 1449
SELN L + +L YE ++ T+K ++ + + ++ + R
Sbjct: 492 NQENIESELNSL---RADYDNLVLD--YE-QLRTEKEEMELKLKEKNDLDEFEALERKTK 545
Query: 1450 NKSMADVLGDGGNSSLTISEGPIVSERRLNQ-EVALNLKEDHEVEVGVLKESVD---LPE 1505
++ + N + + ++ N+ + L + E ++ L+E +D L
Sbjct: 546 KDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQIKKLQEYIDSQKLEN 605
Query: 1506 EKLPISDSPPDTQEIHVIEQEKLEAQDSGEEARNLSFNELYPSGTLKLQYNFDTIDQQFC 1565
K+ +S S ++ ++Q +A+ +A+ S S L+L+ + +
Sbjct: 606 IKMDLSYSLESIEDPKQMKQTLFDAETVALDAKRES--AFLRSENLELKEKMKELATTYK 663
Query: 1566 DLADNKDTAECDI-------AEVDGELFVAQSNFTLILEGEEGEVEPGDFASSDV----- 1613
+ ++ + + +++ EL A + T + +G+V + ++
Sbjct: 664 QMENDIQLYQSQLEAKKKMQVDLEKELQSAFNEITKLTSLIDGKVPKDLLCNLELEGKIT 723
Query: 1614 -LPKAANTATEEKLVCSGENDNHGQIANLPSAVTSDQKSQKVDTLPYVPEPIKVAIAENL 1672
L K N EE E ++ +LPS V +K + + E + + +E
Sbjct: 724 DLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKS-----EELHIITSE-- 776
Query: 1673 LDVIKDTRSKEIT-SDTMEQSIHETIPLVSQNIMCPTKLVKSAFKTAQETSTMTMNVSQV 1731
KD E+ ++ Q + E I ++ KS + Q T+ M+ Q
Sbjct: 777 ----KDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFKTLHMDFEQK 832
Query: 1732 DDVVSSKTRTRGQRIQNVNVKSAQQEASADVATPKMP--GQSVRKKTRKAKEISEASENI 1789
+V + Q I N++ ++ + ++S ++ Q +++KTR+ +E E +
Sbjct: 833 YKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQL 892
Query: 1790 YSDVRGLSQNQQIPQNSVTPRRGRRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQL 1849
+ +N+ +V + +++ Q + E + +++ + +ES +++ QL
Sbjct: 893 KEQL----ENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Query: 1850 LEPAVEETTKKEVKVSSVTKRTPRRIKRSVEN-QESVEIINDLKVSTVTSPSRMIRKLRS 1908
+ + +T + T +++ ++E+ ++ E IN LK SR
Sbjct: 949 -KSDIHDTVNMNID-------TQEQLRNALESLKQHQETINTLKSKISEEVSR------- 993
Query: 1909 TNLDASENTGNKQDDKSSDKQLRI--KHVRRVRGREVSPSDVREDSNLESSQ 1958
NL ENTG +D+ K + I K + + +DV+++ +E +
Sbjct: 994 -NLHMEENTGETKDE-FQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQR 1043
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 47.8 bits (112), Expect = 1e-04
Identities = 103/557 (18%), Positives = 222/557 (39%), Gaps = 71/557 (12%)
Query: 1708 TKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRI--QNVNVKSAQQEASADVATP 1765
+K A KTAQ ++ Q + V ++ R +R Q + A++EA ++
Sbjct: 1580 SKRASFAEKTAQLERSL-----QEEHVAVAQLREEAERRAQQQAEAERAREEAERELERW 1634
Query: 1766 KMPGQSVRKKTRKAKEISEASENIYSDV-------------RGLSQNQQIPQNSVTPRRG 1812
++ + +A+E+++ ++ RG ++ Q + Q + +
Sbjct: 1635 QLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1694
Query: 1813 RRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTP 1872
+++++ + + + EQEL + + QLLE EE + + + ++ T+
Sbjct: 1695 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLE---EELARLQREAAAATQ--- 1748
Query: 1873 RRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASE----NTGNKQDDKSSDK 1928
KR E ++ +++V + S +R + RST+ + + G ++
Sbjct: 1749 ---KRQELEAELAKVRAEMEV-LLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAA 1804
Query: 1929 QLRIKHVRRVRGREVSPSD-VREDSNL------------ESSQLTVQAEFDMSAIPRKRG 1975
+LR R R+++ D R+ + E+++L +AE + +
Sbjct: 1805 RLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE 1864
Query: 1976 RPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGK----PALGKSI 2031
R R++ E + ++E+ + K + I R + A ++ K L +
Sbjct: 1865 RLRRLAEDEAFQRRRLEEQAAQHKAD---IEERLAQLRKASDSELERQKGLVEDTLRQRR 1921
Query: 2032 LVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFT 2091
V E L++ S +K K E + + + S +E+ E +R LA A
Sbjct: 1922 QVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRSKEQAELEAARQRQLA-AEEE 1980
Query: 2092 KSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSS-Q 2150
+ R + R K++ + + + A E + KA K+E +L+E S+ Q
Sbjct: 1981 RRRREAEERVQKSLAAEEEAARQRK----AALEEVERLKA-KVEEARRLRERAEQESARQ 2035
Query: 2151 FVISPPALRSRQKNTSNKN-----KLEDELKDDAQSVETL-----GKPKAKRIRTSKTKQ 2200
++ A + R + + + E EL+ Q +++ G+ +A R + ++
Sbjct: 2036 LQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEE 2095
Query: 2201 ASKNTEKESAWSPPPIE 2217
A E+E+A S +E
Sbjct: 2096 ARVQAEREAAQSRRQVE 2112
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 47.8 bits (112), Expect = 1e-04
Identities = 103/557 (18%), Positives = 222/557 (39%), Gaps = 71/557 (12%)
Query: 1708 TKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRI--QNVNVKSAQQEASADVATP 1765
+K A KTAQ ++ Q + V ++ R +R Q + A++EA ++
Sbjct: 1584 SKRASFAEKTAQLERSL-----QEEHVAVAQLREEAERRAQQQAEAERAREEAERELERW 1638
Query: 1766 KMPGQSVRKKTRKAKEISEASENIYSDV-------------RGLSQNQQIPQNSVTPRRG 1812
++ + +A+E+++ ++ RG ++ Q + Q + +
Sbjct: 1639 QLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1698
Query: 1813 RRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTP 1872
+++++ + + + EQEL + + QLLE EE + + + ++ T+
Sbjct: 1699 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLE---EELARLQREAAAATQ--- 1752
Query: 1873 RRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASE----NTGNKQDDKSSDK 1928
KR E ++ +++V + S +R + RST+ + + G ++
Sbjct: 1753 ---KRQELEAELAKVRAEMEV-LLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAA 1808
Query: 1929 QLRIKHVRRVRGREVSPSD-VREDSNL------------ESSQLTVQAEFDMSAIPRKRG 1975
+LR R R+++ D R+ + E+++L +AE + +
Sbjct: 1809 RLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE 1868
Query: 1976 RPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGK----PALGKSI 2031
R R++ E + ++E+ + K + I R + A ++ K L +
Sbjct: 1869 RLRRLAEDEAFQRRRLEEQAAQHKAD---IEERLAQLRKASDSELERQKGLVEDTLRQRR 1925
Query: 2032 LVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFT 2091
V E L++ S +K K E + + + S +E+ E +R LA A
Sbjct: 1926 QVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRSKEQAELEAARQRQLA-AEEE 1984
Query: 2092 KSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSS-Q 2150
+ R + R K++ + + + A E + KA K+E +L+E S+ Q
Sbjct: 1985 RRRREAEERVQKSLAAEEEAARQRK----AALEEVERLKA-KVEEARRLRERAEQESARQ 2039
Query: 2151 FVISPPALRSRQKNTSNKN-----KLEDELKDDAQSVETL-----GKPKAKRIRTSKTKQ 2200
++ A + R + + + E EL+ Q +++ G+ +A R + ++
Sbjct: 2040 LQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEE 2099
Query: 2201 ASKNTEKESAWSPPPIE 2217
A E+E+A S +E
Sbjct: 2100 ARVQAEREAAQSRRQVE 2116
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 47.8 bits (112), Expect = 1e-04
Identities = 103/557 (18%), Positives = 222/557 (39%), Gaps = 71/557 (12%)
Query: 1708 TKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRI--QNVNVKSAQQEASADVATP 1765
+K A KTAQ ++ Q + V ++ R +R Q + A++EA ++
Sbjct: 1580 SKRASFAEKTAQLERSL-----QEEHVAVAQLREEAERRAQQQAEAERAREEAERELERW 1634
Query: 1766 KMPGQSVRKKTRKAKEISEASENIYSDV-------------RGLSQNQQIPQNSVTPRRG 1812
++ + +A+E+++ ++ RG ++ Q + Q + +
Sbjct: 1635 QLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1694
Query: 1813 RRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTP 1872
+++++ + + + EQEL + + QLLE EE + + + ++ T+
Sbjct: 1695 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLE---EELARLQREAAAATQ--- 1748
Query: 1873 RRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASE----NTGNKQDDKSSDK 1928
KR E ++ +++V + S +R + RST+ + + G ++
Sbjct: 1749 ---KRQELEAELAKVRAEMEV-LLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAA 1804
Query: 1929 QLRIKHVRRVRGREVSPSD-VREDSNL------------ESSQLTVQAEFDMSAIPRKRG 1975
+LR R R+++ D R+ + E+++L +AE + +
Sbjct: 1805 RLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE 1864
Query: 1976 RPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGK----PALGKSI 2031
R R++ E + ++E+ + K + I R + A ++ K L +
Sbjct: 1865 RLRRLAEDEAFQRRRLEEQAAQHKAD---IEERLAQLRKASDSELERQKGLVEDTLRQRR 1921
Query: 2032 LVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFT 2091
V E L++ S +K K E + + + S +E+ E +R LA A
Sbjct: 1922 QVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRSKEQAELEAARQRQLA-AEEE 1980
Query: 2092 KSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSS-Q 2150
+ R + R K++ + + + A E + KA K+E +L+E S+ Q
Sbjct: 1981 RRRREAEERVQKSLAAEEEAARQRK----AALEEVERLKA-KVEEARRLRERAEQESARQ 2035
Query: 2151 FVISPPALRSRQKNTSNKN-----KLEDELKDDAQSVETL-----GKPKAKRIRTSKTKQ 2200
++ A + R + + + E EL+ Q +++ G+ +A R + ++
Sbjct: 2036 LQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEE 2095
Query: 2201 ASKNTEKESAWSPPPIE 2217
A E+E+A S +E
Sbjct: 2096 ARVQAEREAAQSRRQVE 2112
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 47.8 bits (112), Expect = 1e-04
Identities = 103/557 (18%), Positives = 222/557 (39%), Gaps = 71/557 (12%)
Query: 1708 TKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRI--QNVNVKSAQQEASADVATP 1765
+K A KTAQ ++ Q + V ++ R +R Q + A++EA ++
Sbjct: 1548 SKRASFAEKTAQLERSL-----QEEHVAVAQLREEAERRAQQQAEAERAREEAERELERW 1602
Query: 1766 KMPGQSVRKKTRKAKEISEASENIYSDV-------------RGLSQNQQIPQNSVTPRRG 1812
++ + +A+E+++ ++ RG ++ Q + Q + +
Sbjct: 1603 QLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1662
Query: 1813 RRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTP 1872
+++++ + + + EQEL + + QLLE EE + + + ++ T+
Sbjct: 1663 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLE---EELARLQREAAAATQ--- 1716
Query: 1873 RRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASE----NTGNKQDDKSSDK 1928
KR E ++ +++V + S +R + RST+ + + G ++
Sbjct: 1717 ---KRQELEAELAKVRAEMEV-LLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAA 1772
Query: 1929 QLRIKHVRRVRGREVSPSD-VREDSNL------------ESSQLTVQAEFDMSAIPRKRG 1975
+LR R R+++ D R+ + E+++L +AE + +
Sbjct: 1773 RLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE 1832
Query: 1976 RPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGK----PALGKSI 2031
R R++ E + ++E+ + K + I R + A ++ K L +
Sbjct: 1833 RLRRLAEDEAFQRRRLEEQAAQHKAD---IEERLAQLRKASDSELERQKGLVEDTLRQRR 1889
Query: 2032 LVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFT 2091
V E L++ S +K K E + + + S +E+ E +R LA A
Sbjct: 1890 QVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRSKEQAELEAARQRQLA-AEEE 1948
Query: 2092 KSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSS-Q 2150
+ R + R K++ + + + A E + KA K+E +L+E S+ Q
Sbjct: 1949 RRRREAEERVQKSLAAEEEAARQRK----AALEEVERLKA-KVEEARRLRERAEQESARQ 2003
Query: 2151 FVISPPALRSRQKNTSNKN-----KLEDELKDDAQSVETL-----GKPKAKRIRTSKTKQ 2200
++ A + R + + + E EL+ Q +++ G+ +A R + ++
Sbjct: 2004 LQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEE 2063
Query: 2201 ASKNTEKESAWSPPPIE 2217
A E+E+A S +E
Sbjct: 2064 ARVQAEREAAQSRRQVE 2080
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 47.8 bits (112), Expect = 1e-04
Identities = 103/557 (18%), Positives = 222/557 (39%), Gaps = 71/557 (12%)
Query: 1708 TKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRI--QNVNVKSAQQEASADVATP 1765
+K A KTAQ ++ Q + V ++ R +R Q + A++EA ++
Sbjct: 1717 SKRASFAEKTAQLERSL-----QEEHVAVAQLREEAERRAQQQAEAERAREEAERELERW 1771
Query: 1766 KMPGQSVRKKTRKAKEISEASENIYSDV-------------RGLSQNQQIPQNSVTPRRG 1812
++ + +A+E+++ ++ RG ++ Q + Q + +
Sbjct: 1772 QLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1831
Query: 1813 RRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTP 1872
+++++ + + + EQEL + + QLLE EE + + + ++ T+
Sbjct: 1832 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLE---EELARLQREAAAATQ--- 1885
Query: 1873 RRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASE----NTGNKQDDKSSDK 1928
KR E ++ +++V + S +R + RST+ + + G ++
Sbjct: 1886 ---KRQELEAELAKVRAEMEV-LLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAA 1941
Query: 1929 QLRIKHVRRVRGREVSPSD-VREDSNL------------ESSQLTVQAEFDMSAIPRKRG 1975
+LR R R+++ D R+ + E+++L +AE + +
Sbjct: 1942 RLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE 2001
Query: 1976 RPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGK----PALGKSI 2031
R R++ E + ++E+ + K + I R + A ++ K L +
Sbjct: 2002 RLRRLAEDEAFQRRRLEEQAAQHKAD---IEERLAQLRKASDSELERQKGLVEDTLRQRR 2058
Query: 2032 LVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFT 2091
V E L++ S +K K E + + + S +E+ E +R LA A
Sbjct: 2059 QVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRSKEQAELEAARQRQLA-AEEE 2117
Query: 2092 KSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSS-Q 2150
+ R + R K++ + + + A E + KA K+E +L+E S+ Q
Sbjct: 2118 RRRREAEERVQKSLAAEEEAARQRK----AALEEVERLKA-KVEEARRLRERAEQESARQ 2172
Query: 2151 FVISPPALRSRQKNTSNKN-----KLEDELKDDAQSVETL-----GKPKAKRIRTSKTKQ 2200
++ A + R + + + E EL+ Q +++ G+ +A R + ++
Sbjct: 2173 LQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEE 2232
Query: 2201 ASKNTEKESAWSPPPIE 2217
A E+E+A S +E
Sbjct: 2233 ARVQAEREAAQSRRQVE 2249
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 47.8 bits (112), Expect = 1e-04
Identities = 103/557 (18%), Positives = 222/557 (39%), Gaps = 71/557 (12%)
Query: 1708 TKLVKSAFKTAQETSTMTMNVSQVDDVVSSKTRTRGQRI--QNVNVKSAQQEASADVATP 1765
+K A KTAQ ++ Q + V ++ R +R Q + A++EA ++
Sbjct: 1558 SKRASFAEKTAQLERSL-----QEEHVAVAQLREEAERRAQQQAEAERAREEAERELERW 1612
Query: 1766 KMPGQSVRKKTRKAKEISEASENIYSDV-------------RGLSQNQQIPQNSVTPRRG 1812
++ + +A+E+++ ++ RG ++ Q + Q + +
Sbjct: 1613 QLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1672
Query: 1813 RRKKEVNQDILENTSSVEQELQITTGRESKRLKSSQLLEPAVEETTKKEVKVSSVTKRTP 1872
+++++ + + + EQEL + + QLLE EE + + + ++ T+
Sbjct: 1673 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLE---EELARLQREAAAATQ--- 1726
Query: 1873 RRIKRSVENQESVEIINDLKVSTVTSPSRMIRKLRSTNLDASE----NTGNKQDDKSSDK 1928
KR E ++ +++V + S +R + RST+ + + G ++
Sbjct: 1727 ---KRQELEAELAKVRAEMEV-LLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAA 1782
Query: 1929 QLRIKHVRRVRGREVSPSD-VREDSNL------------ESSQLTVQAEFDMSAIPRKRG 1975
+LR R R+++ D R+ + E+++L +AE + +
Sbjct: 1783 RLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENE 1842
Query: 1976 RPRKINPSEDVGSKAVKEERSPKKKEAPSIRRRSTRNTPAKSENVDVGK----PALGKSI 2031
R R++ E + ++E+ + K + I R + A ++ K L +
Sbjct: 1843 RLRRLAEDEAFQRRRLEEQAAQHKAD---IEERLAQLRKASDSELERQKGLVEDTLRQRR 1899
Query: 2032 LVPNEELSMVMSSKKKLTKKTESQSQKRSLHSVSEERTDEMTHKETNEQEERLLATASFT 2091
V E L++ S +K K E + + + S +E+ E +R LA A
Sbjct: 1900 QVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRSKEQAELEAARQRQLA-AEEE 1958
Query: 2092 KSSRSSRTRSSKAILLPDLSEPNNEPLFSPASEVPRKAKAKKIEVPAQLKELVSDLSS-Q 2150
+ R + R K++ + + + A E + KA K+E +L+E S+ Q
Sbjct: 1959 RRRREAEERVQKSLAAEEEAARQRK----AALEEVERLKA-KVEEARRLRERAEQESARQ 2013
Query: 2151 FVISPPALRSRQKNTSNKN-----KLEDELKDDAQSVETL-----GKPKAKRIRTSKTKQ 2200
++ A + R + + + E EL+ Q +++ G+ +A R + ++
Sbjct: 2014 LQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEE 2073
Query: 2201 ASKNTEKESAWSPPPIE 2217
A E+E+A S +E
Sbjct: 2074 ARVQAEREAAQSRRQVE 2090
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,043,960
Number of Sequences: 37866
Number of extensions: 3977677
Number of successful extensions: 13545
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 578
Number of HSP's that attempted gapping in prelim test: 12082
Number of HSP's gapped (non-prelim): 2028
length of query: 2266
length of database: 18,247,518
effective HSP length: 118
effective length of query: 2148
effective length of database: 13,779,330
effective search space: 29598000840
effective search space used: 29598000840
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.