Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 6678764
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6678764 metal response element binding transcription factor
2 [Homo sapiens]
(593 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6678764 metal response element binding transcription factor 2... 1233 0.0
gi|58331161 PHD finger protein 19 isoform a [Homo sapiens] 489 e-138
gi|13435397 PHD finger protein 1 isoform b [Homo sapiens] 406 e-113
gi|4505777 PHD finger protein 1 isoform a [Homo sapiens] 390 e-108
gi|58331163 PHD finger protein 19 isoform b [Homo sapiens] 128 1e-29
gi|24308203 CSRP2 binding protein isoform a [Homo sapiens] 59 1e-08
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 55 2e-07
gi|117190334 PHD finger protein 16 [Homo sapiens] 52 2e-06
gi|7662006 PHD finger protein 16 [Homo sapiens] 52 2e-06
gi|19923609 PHD finger protein 17 short isoform [Homo sapiens] 50 4e-06
gi|40556393 PHD finger protein 17 long isoform [Homo sapiens] 50 4e-06
gi|40556370 PHD finger protein 15 [Homo sapiens] 50 6e-06
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 48 2e-05
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 45 1e-04
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 45 1e-04
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 43 7e-04
gi|51173722 bromodomain and PHD finger-containing protein 1 isof... 43 7e-04
gi|51173720 bromodomain and PHD finger-containing protein 1 isof... 43 7e-04
gi|215599585 integrator complex subunit 12 [Homo sapiens] 42 0.001
gi|21361851 integrator complex subunit 12 [Homo sapiens] 42 0.001
gi|11321642 bromodomain containing protein 1 [Homo sapiens] 42 0.001
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 42 0.002
gi|23312364 ubiquitin-like with PHD and ring finger domains 2 [H... 41 0.004
gi|194328736 PHD finger protein 10 isoform b [Homo sapiens] 40 0.005
gi|194328734 PHD finger protein 10 isoform a [Homo sapiens] 40 0.005
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 40 0.008
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 40 0.008
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 40 0.008
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 40 0.008
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 40 0.008
>gi|6678764 metal response element binding transcription factor 2
[Homo sapiens]
Length = 593
Score = 1233 bits (3189), Expect = 0.0
Identities = 593/593 (100%), Positives = 593/593 (100%)
Query: 1 MRDSTGAGNSLVHKRSPLRRNQKTPTSLTKLSLQDGHKAKKPACKFEEGQDVLARWSDGL 60
MRDSTGAGNSLVHKRSPLRRNQKTPTSLTKLSLQDGHKAKKPACKFEEGQDVLARWSDGL
Sbjct: 1 MRDSTGAGNSLVHKRSPLRRNQKTPTSLTKLSLQDGHKAKKPACKFEEGQDVLARWSDGL 60
Query: 61 FYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMV 120
FYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMV
Sbjct: 61 FYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMV 120
Query: 121 ICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQ 180
ICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQ
Sbjct: 121 ICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQ 180
Query: 181 TLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLF 240
TLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLF
Sbjct: 181 TLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLF 240
Query: 241 GDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENW 300
GDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENW
Sbjct: 241 GDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENW 300
Query: 301 DRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFK 360
DRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFK
Sbjct: 301 DRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFK 360
Query: 361 AEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEP 420
AEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEP
Sbjct: 361 AEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEP 420
Query: 421 LLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSR 480
LLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSR
Sbjct: 421 LLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSR 480
Query: 481 KRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLAD 540
KRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLAD
Sbjct: 481 KRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLAD 540
Query: 541 QELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS 593
QELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
Sbjct: 541 QELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS 593
>gi|58331161 PHD finger protein 19 isoform a [Homo sapiens]
Length = 580
Score = 489 bits (1260), Expect = e-138
Identities = 265/562 (47%), Positives = 346/562 (61%), Gaps = 37/562 (6%)
Query: 45 KFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMV 104
K EGQ VL RW+DGL+YLG IK+++ KQSC + FED+SK WVLWKDIQ E
Sbjct: 39 KLTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPK 98
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGG 164
C IC + S NE++IC KCG GYHQ CH P S+ W CR+C+FA ++GG
Sbjct: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGG 158
Query: 165 ALKKGPNAKALQVMKQTLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQ 224
ALKKG A+ LQ +K L Y +LEWD+ H+TN QQCYCYCGGPG+WYL+MLQC +C+Q
Sbjct: 159 ALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQ 218
Query: 225 WFHEACVQCLQKPMLFGDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKK 284
WFHEAC QCL +PM+FGDRFY F CSVC+ GPEY++RLPL+WVD+ HL LYNL V KKK
Sbjct: 219 WFHEACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKK 278
Query: 285 YFDSELELMTYINENWDRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKKHLF 344
YFD E E++ ++N +W+ L G+L TP ++R H+L ALN YK+ F+ GKEIKKKK +F
Sbjct: 279 YFDFE-EILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIF 337
Query: 345 GLRIRVPPVPPNVAFKAE-KEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKGKKKSVG 403
LRIRVPP PP + P S +++ R SKP E + ++K
Sbjct: 338 RLRIRVPPNPPGKLLPDKGLLPNENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRK--- 394
Query: 404 RPPGPYTRKMIQKTAEPLLDKESI-SENPTL----DLPCSIGRTEGTAHSSNT--SDVDF 456
K + + A P D S S N L D ++ +A S T SDVD
Sbjct: 395 ------RSKFLLEDAIPSSDFTSAWSTNHHLASIFDFTLDEIQSLKSASSGQTFFSDVDS 448
Query: 457 TGASSAKETTSSSISRHYGLS-DSRKRTRTGRSWPAAIPHLRRRR------GRLPRRALQ 509
T A+S + S+S+S + SRKR +++ LR +R GR P +
Sbjct: 449 TDAASTSGSASTSLSYDSRWTVGSRKRKLAAKAYMP----LRAKRWAAELDGRCPSDSSA 504
Query: 510 TQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSITSYFGAAGRIACGEKYR 569
S + DEG + + F+ ++++ + L+HLK+SIT+YFGAAGR+ACGEKY+
Sbjct: 505 EGASVPERPDEGIDSHTFE--------SISEDDSSLSHLKSSITNYFGAAGRLACGEKYQ 556
Query: 570 VLARRVTLDGKVQYLVEWEGAT 591
VLARRVT +GKVQYLVEWEG T
Sbjct: 557 VLARRVTPEGKVQYLVEWEGTT 578
>gi|13435397 PHD finger protein 1 isoform b [Homo sapiens]
Length = 567
Score = 406 bits (1043), Expect = e-113
Identities = 232/563 (41%), Positives = 306/563 (54%), Gaps = 41/563 (7%)
Query: 42 PACKFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSG 101
P + EGQDVLARW+DGL YLGTIKK++ ++ C + FED S+ VLWKDI A
Sbjct: 27 PRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISPAALPGE 86
Query: 102 EMVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTK 161
E++C +C+ E N +V C+KC YHQ CH P + W+CRQCVFA TK
Sbjct: 87 ELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHVPRAPAPGEGEGTSWVCRQCVFAIATK 146
Query: 162 RGGALKKGPNAKALQVMKQTLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCK 221
RGGALKKGP A+A+ MK +LPY + L+WDAGH +N QQ YCYCGGPG+W LKMLQC
Sbjct: 147 RGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGHLSNRQQSYCYCGGPGEWNLKMLQCRS 206
Query: 222 CKQWFHEACVQCLQKPMLFGDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIH 281
C QWFHEAC QCL KP+L+GDRFY F C VC GPE ++RL L+WVD+AHL LY+LSV
Sbjct: 207 CLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGGPEKVRRLQLRWVDVAHLVLYHLSVCC 266
Query: 282 KKKYFDSELELMTYINENWDRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKK 341
KKKYFD + E++ + +ENWD L GEL+DTPK ER +L ALN +K F+SG+EIKK+K
Sbjct: 267 KKKYFDFDREILPFTSENWDSLLLGELSDTPKGERSSKLLSALNSHKDRFISGREIKKRK 326
Query: 342 HLFGLRIRVPP--VPPN-----VAFKAEKEPEGTSHEFKIKGRKASKPISDSREVSNGIE 394
LFGL R+PP PP +F + + P G + R+ +P R +E
Sbjct: 327 CLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGGVSR-PLGKRRRPEPEPLRRRQKGKVE 385
Query: 395 KKGKKKSVGRPPGPY---TRKMIQKTAEPLLDKESISENPTLDLPCSIGRTEGTAHSSNT 451
+ G +V P P R +Q+ + + S S N + A +
Sbjct: 386 ELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPSPSPNQSYQGSSGYNFRPTDARCLPS 445
Query: 452 SDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAAIPHLRRRRGRLPRRALQTQ 511
S + AS +++ S G D R +P IP + ++
Sbjct: 446 SPIRMF-ASFHPSASTAGTSGDSGPPD-RSPLELHIGFPTDIP-------KSAPHSMTAS 496
Query: 512 NSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSITSYFG-----AAGRIACGE 566
+S + G L + + L S++ G G ++ G+
Sbjct: 497 SSSVSSPSPG----------------LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD 540
Query: 567 KYRVLARRVTLDGKVQYLVEWEG 589
RVLARRV DG VQYLVEW G
Sbjct: 541 PVRVLARRVRPDGSVQYLVEWGG 563
>gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]
Length = 457
Score = 390 bits (1001), Expect = e-108
Identities = 178/311 (57%), Positives = 220/311 (70%)
Query: 42 PACKFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSG 101
P + EGQDVLARW+DGL YLGTIKK++ ++ C + FED S+ VLWKDI A
Sbjct: 27 PRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISPAALPGE 86
Query: 102 EMVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTK 161
E++C +C+ E N +V C+KC YHQ CH P + W+CRQCVFA TK
Sbjct: 87 ELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHVPRAPAPGEGEGTSWVCRQCVFAIATK 146
Query: 162 RGGALKKGPNAKALQVMKQTLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCK 221
RGGALKKGP A+A+ MK +LPY + L+WDAGH +N QQ YCYCGGPG+W LKMLQC
Sbjct: 147 RGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGHLSNRQQSYCYCGGPGEWNLKMLQCRS 206
Query: 222 CKQWFHEACVQCLQKPMLFGDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIH 281
C QWFHEAC QCL KP+L+GDRFY F C VC GPE ++RL L+WVD+AHL LY+LSV
Sbjct: 207 CLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGGPEKVRRLQLRWVDVAHLVLYHLSVCC 266
Query: 282 KKKYFDSELELMTYINENWDRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKK 341
KKKYFD + E++ + +ENWD L GEL+DTPK ER +L ALN +K F+SG+EIKK+K
Sbjct: 267 KKKYFDFDREILPFTSENWDSLLLGELSDTPKGERSSKLLSALNSHKDRFISGREIKKRK 326
Query: 342 HLFGLRIRVPP 352
LFGL R+PP
Sbjct: 327 CLFGLHARMPP 337
>gi|58331163 PHD finger protein 19 isoform b [Homo sapiens]
Length = 207
Score = 128 bits (322), Expect = 1e-29
Identities = 59/117 (50%), Positives = 73/117 (62%)
Query: 45 KFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMV 104
K EGQ VL RW+DGL+YLG IK+++ KQSC + FED+SK WVLWKDIQ E
Sbjct: 39 KLTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPK 98
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTK 161
C IC + S NE++IC KCG GYHQ CH P S+ W CR+C+FA +
Sbjct: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVR 155
>gi|24308203 CSRP2 binding protein isoform a [Homo sapiens]
Length = 782
Score = 59.3 bits (142), Expect = 1e-08
Identities = 95/366 (25%), Positives = 145/366 (39%), Gaps = 44/366 (12%)
Query: 157 ATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD-AGHKTNVQQCYCYCGGPGDWYLK 215
AT T L++G ++ ++ + DL D +G N + G W +
Sbjct: 18 ATRTSTSEGLEEGEVEGETLLIVESEDQASVDLSHDQSGDSLNSDE------GDVSWMEE 71
Query: 216 MLQ--CCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVCSS-GPEYLKRLPLQWVDIAHL 272
L C KC++W + ++ Q L GD F+ F CS CS+ G E +RL L W + L
Sbjct: 72 QLSYFCDKCQKWIPASQLR-EQLSYLKGDNFFRFTCSDCSADGKEQYERLKLTWQQVVML 130
Query: 273 CLYNLSV--IHKKKYFDSELELMTYINENWDRLHPGELADTPK-SERYEHVLEALNDYKT 329
+YNLS+ ++ YF + ++ +I ++W L L + K S + V L+
Sbjct: 131 AMYNLSLEGSGRQGYFRWKEDICAFIEKHWTFL----LGNRKKTSTWWSTVAGCLSVGSP 186
Query: 330 M-FMSGKEIKKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEFKIKGRKASKPISDSRE 388
M F SG + + + L V PP + + EK T +K + ASKP D
Sbjct: 187 MYFRSGAQEFGEPGWWKL---VHNKPPTMKPEGEKLSAST-----LKIKAASKPTLDPII 238
Query: 389 VSNGIEKKGKKKSV----------GRPPGPYTRKMIQKTAEPLLDKESISENPTLDLPCS 438
G+ K+ + V R + QK A LD+ S S P + S
Sbjct: 239 TVEGLRKRASRNPVESAMELKEKRSRTQEAKDIRRAQKEAAGFLDR-STSSTPVKFI--S 295
Query: 439 IGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAAIPHLRR 498
GR +DF+ SS+ T +S S L S T S A P L
Sbjct: 296 RGRRPDVILEKG-EVIDFSSLSSSDRTPLTSPSPSPSLDFSAPGTPASHS---ATPSLLS 351
Query: 499 RRGRLP 504
+P
Sbjct: 352 EADLIP 357
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 55.1 bits (131), Expect = 2e-07
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGG 164
C +C ++ +A +++ C+KC YH C P+ + + W+C +CV K G
Sbjct: 1482 CHVCGRQH-QATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCV---RCKSCG 1537
Query: 165 ALKKGPNAKALQVMKQTLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQ 224
+ G A +L + A L +CY D+ KM+QC KC +
Sbjct: 1538 STTPGKGWDAQWSHDFSLCHDCAKLFAKGNFCPLCDKCY----DDDDYESKMMQCGKCDR 1593
Query: 225 WFHEAC 230
W H C
Sbjct: 1594 WVHSKC 1599
Score = 29.6 bits (65), Expect = 8.2
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 338 KKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKG 397
K K + + +PP PP ++ P+ T E K K P +S G E+
Sbjct: 1293 KSSKQVSQPALVIPPQPPTTGPPRKEVPKTTPSEPK----KKQPPPPES-----GPEQSK 1343
Query: 398 KKKSVGRPPGPYTRKMIQKTAEPLLDKE 425
+KK RP P +K +K P ++K+
Sbjct: 1344 QKKVAPRPSIPVKQKPKEKEKPPPVNKQ 1371
>gi|117190334 PHD finger protein 16 [Homo sapiens]
Length = 823
Score = 52.0 bits (123), Expect = 2e-06
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 13/73 (17%)
Query: 102 EMVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDE-KWLCRQCVF---- 156
+++C +C+ SE N+MV CDKC HQ C+ ++ E WLCR CV
Sbjct: 200 DVICDVCRSPDSEEGNDMVFCDKCNVCVHQACY------GILKVPEGSWLCRSCVLGIYP 253
Query: 157 --ATTTKRGGALK 167
K+GGALK
Sbjct: 254 QCVLCPKKGGALK 266
>gi|7662006 PHD finger protein 16 [Homo sapiens]
Length = 823
Score = 52.0 bits (123), Expect = 2e-06
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 13/73 (17%)
Query: 102 EMVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDE-KWLCRQCVF---- 156
+++C +C+ SE N+MV CDKC HQ C+ ++ E WLCR CV
Sbjct: 200 DVICDVCRSPDSEEGNDMVFCDKCNVCVHQACY------GILKVPEGSWLCRSCVLGIYP 253
Query: 157 --ATTTKRGGALK 167
K+GGALK
Sbjct: 254 QCVLCPKKGGALK 266
>gi|19923609 PHD finger protein 17 short isoform [Homo sapiens]
Length = 509
Score = 50.4 bits (119), Expect = 4e-06
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 102 EMVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDE-KWLCRQCVFAT-- 158
++VC +CQ E NEMV CDKC HQ C+ ++ E WLCR C
Sbjct: 203 DVVCDVCQSPDGEDGNEMVFCDKCNICVHQACY------GILKVPEGSWLCRTCALGVQP 256
Query: 159 ----TTKRGGALK 167
K+GGA+K
Sbjct: 257 KCLLCPKKGGAMK 269
>gi|40556393 PHD finger protein 17 long isoform [Homo sapiens]
Length = 842
Score = 50.4 bits (119), Expect = 4e-06
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 102 EMVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDE-KWLCRQCVFAT-- 158
++VC +CQ E NEMV CDKC HQ C+ ++ E WLCR C
Sbjct: 203 DVVCDVCQSPDGEDGNEMVFCDKCNICVHQACY------GILKVPEGSWLCRTCALGVQP 256
Query: 159 ----TTKRGGALK 167
K+GGA+K
Sbjct: 257 KCLLCPKKGGAMK 269
>gi|40556370 PHD finger protein 15 [Homo sapiens]
Length = 790
Score = 50.1 bits (118), Expect = 6e-06
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 102 EMVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT--- 158
++VC +C+ E NEMV CDKC HQ C+ + WLCR C
Sbjct: 199 DVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACY-----GILKVPTGSWLCRTCALGVQPK 253
Query: 159 ---TTKRGGALK 167
KRGGALK
Sbjct: 254 CLLCPKRGGALK 265
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 48.1 bits (113), Expect = 2e-05
Identities = 42/182 (23%), Positives = 61/182 (33%), Gaps = 49/182 (26%)
Query: 93 IQTGATGSGEMVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCR 152
+ T G MVC +C S+ +E+V C C +H C + + + W CR
Sbjct: 1192 VLTSVPGGPPMVCLLCA---SKGLHELVFCQVCCDPFHPFC-LEEAERPLPQHHDTWCCR 1247
Query: 153 QCVFATTTKRGGALKK-----------------GPNAKALQVMKQ--------------- 180
+C F R G K GP+ K+
Sbjct: 1248 RCKFCHVCGRKGRGSKHLLECERCRHAYHPACLGPSYPTRATRKRRHWICSACVRCKSCG 1307
Query: 181 TLPYSVADLEWDAGHKTNVQQC--------YC----YCGGPGDWYLKMLQCCKCKQWFHE 228
P D+EW +G + +C YC C D+ KM+QC +C W H
Sbjct: 1308 ATPGKNWDVEW-SGDYSLCPRCTQLYEKGNYCPICTRCYEDNDYESKMMQCAQCDHWVHA 1366
Query: 229 AC 230
C
Sbjct: 1367 KC 1368
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 45.4 bits (106), Expect = 1e-04
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 34/184 (18%)
Query: 386 SREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPTLDLPCSIGRTEGT 445
SR S+ E+ G GR P PY R+ +++ P L K S+S +P R+
Sbjct: 306 SRRRSSSYERSGSYS--GRSPSPYGRR---RSSSPFLSKRSLSRSPLPSRKSMKSRSRSP 360
Query: 446 AHSSNTSDVDFTGASSAKETTSSSISRHYGLSD-------------SRKRTRTGRSWPAA 492
A+S ++S S +K+ SSS SRH +S SRK+ + AA
Sbjct: 361 AYSRHSS-------SHSKKKRSSSRSRHSSISPVRLPLNSSLGAELSRKKKERAAAAAAA 413
Query: 493 IPHLRRRRGR---LPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQEL-QLNHL 548
+ +G LPR+ +NS + D G E + + ++ + D EL + HL
Sbjct: 414 KMDGKESKGSPVFLPRK----ENSSVEAKDSGLESKKLPR-SVKLEKSAPDTELVNVTHL 468
Query: 549 KNSI 552
+
Sbjct: 469 NTEV 472
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 45.4 bits (106), Expect = 1e-04
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 34/184 (18%)
Query: 386 SREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPTLDLPCSIGRTEGT 445
SR S+ E+ G GR P PY R+ +++ P L K S+S +P R+
Sbjct: 306 SRRRSSSYERSGSYS--GRSPSPYGRR---RSSSPFLSKRSLSRSPLPSRKSMKSRSRSP 360
Query: 446 AHSSNTSDVDFTGASSAKETTSSSISRHYGLSD-------------SRKRTRTGRSWPAA 492
A+S ++S S +K+ SSS SRH +S SRK+ + AA
Sbjct: 361 AYSRHSS-------SHSKKKRSSSRSRHSSISPVRLPLNSSLGAELSRKKKERAAAAAAA 413
Query: 493 IPHLRRRRGR---LPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQEL-QLNHL 548
+ +G LPR+ +NS + D G E + + ++ + D EL + HL
Sbjct: 414 KMDGKESKGSPVFLPRK----ENSSVEAKDSGLESKKLPR-SVKLEKSAPDTELVNVTHL 468
Query: 549 KNSI 552
+
Sbjct: 469 NTEV 472
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 43.1 bits (100), Expect = 7e-04
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 30/136 (22%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGG 164
C +CQ+ E+++CD C + YH +C P ++ + + KW C C K G
Sbjct: 373 CEVCQQG-----GEIILCDTCPRAYHMVCLDPDMEKA---PEGKWSCPHC-----EKEGI 419
Query: 165 ALK-KGPNAKALQVMKQTLPYSVADLEWDAGHKTNVQQC-YCYCGGPGDWYLKMLQCCKC 222
+ K N++ +++++ DLE + H +++ C C GG ++L C C
Sbjct: 420 QWEAKEDNSEGEEILEEV----GGDLEEEDDH--HMEFCRVCKDGG------ELLCCDTC 467
Query: 223 KQWFHEACVQCLQKPM 238
+H + CL P+
Sbjct: 468 PSSYH---IHCLNPPL 480
>gi|51173722 bromodomain and PHD finger-containing protein 1 isoform
2 [Homo sapiens]
Length = 1214
Score = 43.1 bits (100), Expect = 7e-04
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 34/147 (23%)
Query: 102 EMVCTICQEEYSEAPNEMVICDKCGQGYHQLCH-TPHIDSSVIDSDEKWLCRQCV----- 155
+ VC IC + + N ++ CD C HQ C+ P+I + +WLCR+C+
Sbjct: 273 DAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYI------PEGQWLCRRCLQSPSR 326
Query: 156 ---FATTTKRGGALKKGPNAK------ALQVMKQTLPYSVADLEWDAGHKTNVQQCYCYC 206
A +GGA K+ + + AL + + +V D+
Sbjct: 327 AVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHI--------- 377
Query: 207 GGPGDWYLKMLQCCKCKQWFHEACVQC 233
P W L C CKQ AC+QC
Sbjct: 378 -PPARW---KLTCYICKQRGSGACIQC 400
>gi|51173720 bromodomain and PHD finger-containing protein 1 isoform
1 [Homo sapiens]
Length = 1220
Score = 43.1 bits (100), Expect = 7e-04
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 34/147 (23%)
Query: 102 EMVCTICQEEYSEAPNEMVICDKCGQGYHQLCH-TPHIDSSVIDSDEKWLCRQCV----- 155
+ VC IC + + N ++ CD C HQ C+ P+I + +WLCR+C+
Sbjct: 273 DAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYI------PEGQWLCRRCLQSPSR 326
Query: 156 ---FATTTKRGGALKKGPNAK------ALQVMKQTLPYSVADLEWDAGHKTNVQQCYCYC 206
A +GGA K+ + + AL + + +V D+
Sbjct: 327 AVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHI--------- 377
Query: 207 GGPGDWYLKMLQCCKCKQWFHEACVQC 233
P W L C CKQ AC+QC
Sbjct: 378 -PPARW---KLTCYICKQRGSGACIQC 400
>gi|215599585 integrator complex subunit 12 [Homo sapiens]
Length = 462
Score = 42.4 bits (98), Expect = 0.001
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 103 MVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHI-DSSVIDSDEKWLCRQC 154
+ C +C++ + N++V C +C YH+ CH P + D D W C +C
Sbjct: 160 LACVVCRQMMVASGNQLVECQECHNLYHRDCHKPQVTDKEANDPRLVWYCARC 212
>gi|21361851 integrator complex subunit 12 [Homo sapiens]
Length = 462
Score = 42.4 bits (98), Expect = 0.001
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 103 MVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHI-DSSVIDSDEKWLCRQC 154
+ C +C++ + N++V C +C YH+ CH P + D D W C +C
Sbjct: 160 LACVVCRQMMVASGNQLVECQECHNLYHRDCHKPQVTDKEANDPRLVWYCARC 212
>gi|11321642 bromodomain containing protein 1 [Homo sapiens]
Length = 1058
Score = 42.4 bits (98), Expect = 0.001
Identities = 39/147 (26%), Positives = 55/147 (37%), Gaps = 34/147 (23%)
Query: 102 EMVCTICQEEYSEAPNEMVICDKCGQGYHQLCH-TPHIDSSVIDSDEKWLCRQCVFATT- 159
+ VC IC + + N ++ CD C HQ C+ P+I + +WLCR C+ +
Sbjct: 214 DAVCCICMDGECQNSNVILFCDMCNLAVHQECYGVPYI------PEGQWLCRHCLQSRAR 267
Query: 160 -------TKRGGALKK------GPNAKALQVMKQTLPYSVADLEWDAGHKTNVQQCYCYC 206
+GGA KK G AL + + +V D
Sbjct: 268 PADCVLCPNKGGAFKKTDDDRWGHVVCALWIPEVGFANTVFIEPIDGVRNI--------- 318
Query: 207 GGPGDWYLKMLQCCKCKQWFHEACVQC 233
P W L C CKQ AC+QC
Sbjct: 319 -PPARW---KLTCYLCKQKGVGACIQC 341
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 42.0 bits (97), Expect = 0.002
Identities = 45/175 (25%), Positives = 66/175 (37%), Gaps = 31/175 (17%)
Query: 105 CTICQE-EYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRG 163
C +CQ + S ++M++CD C +GYH C P + S + W C+ C
Sbjct: 388 CKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNG---WKCKNCRICIECGTR 444
Query: 164 GALKKGPNAKALQVMKQTLPYSVADLEWDAGHKTNVQQC-YC-YCGGPGDWYLKMLQCCK 221
+ + N L D ++ C +C C P + ML C
Sbjct: 445 SSSQWHHNC----------------LICDNCYQQQDNLCPFCGKCYHP-ELQKDMLHCNM 487
Query: 222 CKQWFHEACVQCLQKPM---LFGDRFYTFICSVCSS-GPEYLKRLPLQWVDIAHL 272
CK+W H C KP L +IC C G E + P + V+IA L
Sbjct: 488 CKRWVHLEC----DKPTDHELDTQLKEEYICMYCKHLGAEMDRLQPGEEVEIAEL 538
Score = 41.6 bits (96), Expect = 0.002
Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 22/150 (14%)
Query: 105 CTICQE-EYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRG 163
CT+C+ + P +++CD C YH C P + + W C+ CV+ +
Sbjct: 1007 CTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTV---PKGGWKCKWCVWC---RHC 1060
Query: 164 GALKKGPNAKALQVMKQTLPYSVADLEWDAGHKTNVQQC-YCYCGGPGDWYLKMLQCCKC 222
GA G + Q P + ++ C CY + + LQC +C
Sbjct: 1061 GATSAGLRCEWQNNYTQCAPCA------------SLSSCPVCYRNYREEDLI--LQCRQC 1106
Query: 223 KQWFHEACVQCLQKPMLFGDRFYTFICSVC 252
+W H C + + F CS+C
Sbjct: 1107 DRWMHAVCQNLNTEEEVENVADIGFDCSMC 1136
Score = 38.5 bits (88), Expect = 0.018
Identities = 49/224 (21%), Positives = 79/224 (35%), Gaps = 57/224 (25%)
Query: 105 CTICQEEYSEAPNEMV---ICDKCGQGYHQLCHTPHIDSSVIDSDEK-WLCRQCVFATTT 160
C +C ++P +++ C CGQ YH +C +D +V W C +C
Sbjct: 344 CAVC-----DSPGDLLDQFFCTTCGQHYHGMC----LDIAVTPLKRAGWQCPECKVCQNC 394
Query: 161 KRGG---------ALKKGPNAKALQVMKQTLPYSVADLEWDAGHKTNVQQCY-CYCGGPG 210
K+ G KG + LQ + +++P + W N + C C
Sbjct: 395 KQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTN----GWKC---KNCRICIECGTRSSS 447
Query: 211 DWYLKMLQCCKCKQWFHEACVQC-------LQKPMLFGDRFYTFICSVCSSGPEYLKRLP 263
W+ L C C Q C C LQK ML + ++ C ++ L
Sbjct: 448 QWHHNCLICDNCYQQQDNLCPFCGKCYHPELQKDMLHCNMCKRWVHLECDKPTDH--ELD 505
Query: 264 LQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGE 307
Q + ++C+Y ++ DRL PGE
Sbjct: 506 TQLKE-EYICMY-----------------CKHLGAEMDRLQPGE 531
>gi|23312364 ubiquitin-like with PHD and ring finger domains 2 [Homo
sapiens]
Length = 802
Score = 40.8 bits (94), Expect = 0.004
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGG 164
C +C ++ PN ++CD+C YH C P +D + +E W C C T
Sbjct: 347 CRVCGGKHE--PNMQLLCDECNVAYHIYCLNPPLDK--VPEEEYWYCPSC----KTDSSE 398
Query: 165 ALKKGPNAKALQVMKQTLPYSVADLEWDAG 194
+K G K + K +P + + D G
Sbjct: 399 VVKAGERLK-MSKKKAKMPSASTESRRDWG 427
>gi|194328736 PHD finger protein 10 isoform b [Homo sapiens]
Length = 496
Score = 40.4 bits (93), Expect = 0.005
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGG 164
C IC + + E EM+ CD C +GYH C + I S +W+C C A T R
Sbjct: 434 CIICGQPHHE--EEMMFCDMCDRGYHTFC----VGLGAIPSG-RWICDCCQRAPPTPRKV 486
Query: 165 ALKKGPNAK 173
++G N+K
Sbjct: 487 G-RRGKNSK 494
>gi|194328734 PHD finger protein 10 isoform a [Homo sapiens]
Length = 498
Score = 40.4 bits (93), Expect = 0.005
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGG 164
C IC + + E EM+ CD C +GYH C + I S +W+C C A T R
Sbjct: 436 CIICGQPHHE--EEMMFCDMCDRGYHTFC----VGLGAIPSG-RWICDCCQRAPPTPRKV 488
Query: 165 ALKKGPNAK 173
++G N+K
Sbjct: 489 G-RRGKNSK 496
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 39.7 bits (91), Expect = 0.008
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQC 154
C +CQ+ E+++CD C + YH +C P +D + + KW C C
Sbjct: 382 CEVCQQG-----GEIILCDTCPRAYHLVCLDPELDRA---PEGKWSCPHC 423
Score = 30.4 bits (67), Expect = 4.8
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQC 154
C +C++ E++ CD C YH C P + + +WLC +C
Sbjct: 459 CRVCKDG-----GELLCCDACISSYHIHCLNPPLPDI---PNGEWLCPRC 500
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 39.7 bits (91), Expect = 0.008
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQC 154
C +CQ+ E+++CD C + YH +C P +D + + KW C C
Sbjct: 382 CEVCQQG-----GEIILCDTCPRAYHLVCLDPELDRA---PEGKWSCPHC 423
Score = 30.4 bits (67), Expect = 4.8
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQC 154
C +C++ E++ CD C YH C P + + +WLC +C
Sbjct: 459 CRVCKDG-----GELLCCDACISSYHIHCLNPPLPDI---PNGEWLCPRC 500
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 39.7 bits (91), Expect = 0.008
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQC 154
C +CQ+ E+++CD C + YH +C P +D + + KW C C
Sbjct: 441 CEVCQQG-----GEIILCDTCPRAYHLVCLDPELDRA---PEGKWSCPHC 482
Score = 30.4 bits (67), Expect = 4.8
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Query: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQC 154
C +C++ E++ CD C YH C P + + +WLC +C
Sbjct: 518 CRVCKDG-----GELLCCDACISSYHIHCLNPPLPDI---PNGEWLCPRC 559
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 39.7 bits (91), Expect = 0.008
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 103 MVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVI------DSDEKWLCRQC 154
++C +C + SE +E++ CD CG H+ C+ +S I +S E W C C
Sbjct: 320 LICCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDAC 377
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 39.7 bits (91), Expect = 0.008
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 103 MVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVI------DSDEKWLCRQC 154
++C +C + SE +E++ CD CG H+ C+ +S I +S E W C C
Sbjct: 320 LICCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDAC 377
Score = 31.6 bits (70), Expect = 2.2
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 105 CTICQEEYSEAPNE-MVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQC 154
C C+ NE +V CD+C YH C P + S + W+C++C
Sbjct: 871 CATCK---GTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQEC 918
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,456,040
Number of Sequences: 37866
Number of extensions: 1227022
Number of successful extensions: 4416
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 4143
Number of HSP's gapped (non-prelim): 364
length of query: 593
length of database: 18,247,518
effective HSP length: 108
effective length of query: 485
effective length of database: 14,157,990
effective search space: 6866625150
effective search space used: 6866625150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.