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Search of human proteins with 66348045
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|66348045 zinc finger, C3HC type 1 [Homo sapiens]
(502 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66348045 zinc finger, C3HC type 1 [Homo sapiens] 1026 0.0
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 40 0.004
gi|4885243 FOS-like antigen 1 [Homo sapiens] 39 0.011
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 39 0.011
gi|67782346 lysyl oxidase-like 1 preproprotein [Homo sapiens] 39 0.014
gi|91982772 mucin 17 [Homo sapiens] 38 0.019
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 38 0.019
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 38 0.025
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 38 0.025
gi|223029436 hypothetical protein LOC643376 [Homo sapiens] 37 0.032
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.042
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.042
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 37 0.042
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 37 0.042
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 37 0.055
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 37 0.055
gi|236459851 ubinuclein 2 [Homo sapiens] 36 0.071
gi|25121980 dispatched B [Homo sapiens] 36 0.093
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 35 0.12
gi|13376611 zinc finger protein 703 [Homo sapiens] 35 0.12
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 35 0.12
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 35 0.21
gi|130502162 RAS protein activator like 3 [Homo sapiens] 35 0.21
gi|22779860 forkhead box L1 [Homo sapiens] 35 0.21
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 34 0.27
gi|47132519 Ras association and pleckstrin homology domains 1 is... 34 0.27
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 34 0.35
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 34 0.35
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 34 0.35
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 34 0.35
>gi|66348045 zinc finger, C3HC type 1 [Homo sapiens]
Length = 502
Score = 1026 bits (2652), Expect = 0.0
Identities = 502/502 (100%), Positives = 502/502 (100%)
Query: 1 MAAPCEGQAFAVGVEKNWGAVVRSPEGTPQKIRQLIDEGIAPEEGGVDAKDTSATSQSVN 60
MAAPCEGQAFAVGVEKNWGAVVRSPEGTPQKIRQLIDEGIAPEEGGVDAKDTSATSQSVN
Sbjct: 1 MAAPCEGQAFAVGVEKNWGAVVRSPEGTPQKIRQLIDEGIAPEEGGVDAKDTSATSQSVN 60
Query: 61 GSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPFELSPLVCAKYGWVTVECDMLKCSSC 120
GSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPFELSPLVCAKYGWVTVECDMLKCSSC
Sbjct: 61 GSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPFELSPLVCAKYGWVTVECDMLKCSSC 120
Query: 121 QAFLCASLQPAFDFDRYKQRCAELKKALCTAHEKFCFWPDSPSPDRFGMLPLDEPAILVS 180
QAFLCASLQPAFDFDRYKQRCAELKKALCTAHEKFCFWPDSPSPDRFGMLPLDEPAILVS
Sbjct: 121 QAFLCASLQPAFDFDRYKQRCAELKKALCTAHEKFCFWPDSPSPDRFGMLPLDEPAILVS 180
Query: 181 EFLDRFQSLCHLDLQLPSLRPEDLKTMCLTEDKISLLLHLLEDELDHRTDERKTTIKLGS 240
EFLDRFQSLCHLDLQLPSLRPEDLKTMCLTEDKISLLLHLLEDELDHRTDERKTTIKLGS
Sbjct: 181 EFLDRFQSLCHLDLQLPSLRPEDLKTMCLTEDKISLLLHLLEDELDHRTDERKTTIKLGS 240
Query: 241 DIQVHVTACILSVCGWACSSSLESMQLSLITCSQCMRKVGLWGFQQIESSMTDLDASFGL 300
DIQVHVTACILSVCGWACSSSLESMQLSLITCSQCMRKVGLWGFQQIESSMTDLDASFGL
Sbjct: 241 DIQVHVTACILSVCGWACSSSLESMQLSLITCSQCMRKVGLWGFQQIESSMTDLDASFGL 300
Query: 301 TSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSP 360
TSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSP
Sbjct: 301 TSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSP 360
Query: 361 VDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFD 420
VDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFD
Sbjct: 361 VDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFD 420
Query: 421 PTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVLTILLAHKQSSQPAETDSM 480
PTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVLTILLAHKQSSQPAETDSM
Sbjct: 421 PTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVLTILLAHKQSSQPAETDSM 480
Query: 481 SLSEKSRKVFRIFRQWESLCSC 502
SLSEKSRKVFRIFRQWESLCSC
Sbjct: 481 SLSEKSRKVFRIFRQWESLCSC 502
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 40.4 bits (93), Expect = 0.004
Identities = 53/215 (24%), Positives = 76/215 (35%), Gaps = 31/215 (14%)
Query: 288 ESSMTDLDASFGLTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSP-------GSEQ 340
++S T+L A+ G S I + G PE P P P T Q + G E
Sbjct: 2209 QASETELAAAIG---SIINDISGEPENFPAPPPYPGESQTDLQPPAGAQALQPSEEGMET 2265
Query: 341 AEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTP----GLEVPSSP 396
E G + + + S PV+ P+P A T+ S + P EV +
Sbjct: 2266 DEAVSGILETEAATESSRPPVNAPDPSAGPTDTKEARGNSSETSHSVPEAKGSKEVEVTL 2325
Query: 397 LRKAK-RARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTE-PDASAPA 454
+RK K R + S +++ P H P N G+ N GT AP
Sbjct: 2326 VRKDKGRQKTTRSRRKRNTNKKVVAPVESH---VPESNQAQGESPAANEGTTVQHPEAPQ 2382
Query: 455 EPGWKAVLTILLAHKQSSQPAETDSMSLSEKSRKV 489
E KQS +P T S + K+
Sbjct: 2383 E------------EKQSEKPHSTPPQSCTSDLSKI 2405
Score = 32.3 bits (72), Expect = 1.0
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 17/119 (14%)
Query: 349 VSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGT-GD----TPGLEVPSSP--LRKAK 401
++RT S +S++ ++ PEP TR R V T GD +P E P RK
Sbjct: 1875 ITRTASKNSAADLEHPEPSLPLSRTRRRNVRSVYATMGDHENRSPVKEPVEQPRVTRKRL 1934
Query: 402 RARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKA 460
L +++ T+ R P ++ R E EN EP + GW++
Sbjct: 1935 ERELQEAAAVPTTPRRGRPPKTRRR----------ADEEEENEAKEPAETLKPPEGWRS 1983
>gi|4885243 FOS-like antigen 1 [Homo sapiens]
Length = 271
Score = 38.9 bits (89), Expect = 0.011
Identities = 50/149 (33%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
Query: 277 RKVGLWGFQQIESSMTDLDASFGLTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSP 336
R+ L F Q E+ + D GL I L+ + ERL LV E+ R + + A
Sbjct: 125 RRKELTDFLQAETDKLE-DEKSGLQRE-IEELQKQKERLELVLEAHRPICKIPEGAKEGD 182
Query: 337 GSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAA-SPTTRTRPVTRSMGTGDTPGL--EVP 393
+ S P R S SP EPEA +PT T P T TP L P
Sbjct: 183 TGSTSGTSSPPAPCRPVPCISLSPGPVLEPEALHTPTLMTTPSL----TPFTPSLVFTYP 238
Query: 394 SSPLRKAKRARLCSSSSSDTSSRSFFDPT 422
S+P A R SSSS D SS PT
Sbjct: 239 STPEPCASAHRKSSSSSGDPSSDPLGSPT 267
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 38.9 bits (89), Expect = 0.011
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 304 PIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDR 363
P+P + RP +P+ P P M A PGS A PGP ++ W +PV
Sbjct: 248 PVPPMPPRPPMVPMPPRPPIAPMPPM--APVPPGSRMAPVPPGPRMAPVPPWPPMAPVPP 305
Query: 364 PEPEAASPT 372
P A PT
Sbjct: 306 WPPMAPVPT 314
>gi|67782346 lysyl oxidase-like 1 preproprotein [Homo sapiens]
Length = 574
Score = 38.5 bits (88), Expect = 0.014
Identities = 36/120 (30%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 300 LTSSPIPGLEGRPERLPLVPESPR------RMMTRSQDATFSPGSEQAEKSPGPIVSRTR 353
L P G PER P VP P R + S + +PG EQA PGP ++
Sbjct: 243 LPEYPPQGFYPAPER-PYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAH 301
Query: 354 SWDSS----SPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSS 409
D P P PEA P P + + DTP P A++ RL S
Sbjct: 302 GGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTP---PPGGERNGAQQGRLSVGS 358
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 38.1 bits (87), Expect = 0.019
Identities = 47/228 (20%), Positives = 83/228 (36%), Gaps = 48/228 (21%)
Query: 300 LTSSPI---PGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPG---------- 346
L S P+ P + L P ++T S +A+ SP + P
Sbjct: 3401 LASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPL 3460
Query: 347 --------PIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSM--------GTGDTP-- 388
P+ S S S++PVD P S T + P T + G G TP
Sbjct: 3461 SIMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPTNSSPTTAEVTSMPTSTAGEGSTPLT 3520
Query: 389 GLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGG--- 445
+ V ++P+ ++ + L S++ S +F +SQ + +T + S + G
Sbjct: 3521 NMPVSTTPVASSEASTL---STTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSS 3577
Query: 446 -----------TEPDASAPAEPGWKAVLTILLAHKQSSQPAETDSMSL 482
T +AS P+ P + + + +S P + ++L
Sbjct: 3578 LTTMLLSSTYVTSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITL 3625
Score = 31.6 bits (70), Expect = 1.8
Identities = 53/234 (22%), Positives = 83/234 (35%), Gaps = 47/234 (20%)
Query: 259 SSSLESMQLSLITCSQCMRKVGLWGFQQIESSMTDLDASFGLTSSPIPGLEGRPERLPLV 318
++++ S + + ++ + + + + Q+ SS T D S TS+P EGRP L +
Sbjct: 1876 TTTVASSETNTLSTTPAVTSTPVTTYAQVSSSPTTADGSSMPTSTP---REGRPP-LTSI 1931
Query: 319 PESP------------------RRMMTRSQDATFSPGSEQAEKSPGP------------- 347
P S R +T A+ SP + P P
Sbjct: 1932 PVSTTTVASSEINTLSTTLADTRTPVTTYSQASSSPTTADGTSMPTPAYSEGSTPLTSMP 1991
Query: 348 -----IVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLR-KAK 401
+VS S S++PVD P S + P T + T ++PL
Sbjct: 1992 LSTTLVVSSEASTLSTTPVDTSTPATTSTEGSSSPTTAGGTSIQTSTPSERTTPLAGMPV 2051
Query: 402 RARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAE 455
L SS +T S + D +Q N T S G+ SAP+E
Sbjct: 2052 STTLVVSSEGNTLSTTPVDSKTQ------VTNSTEASSSATAEGSSMTISAPSE 2099
Score = 31.2 bits (69), Expect = 2.3
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 10/73 (13%)
Query: 327 TRSQDATFSPGSEQAEKSPG---PIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMG 383
T +T+S GS P P+VS S S++PVD P S + P T
Sbjct: 2385 TSMPTSTYSEGSTPLTSVPVSTMPVVSSEASTHSTTPVDTSTPVTTSTEASSSPTT---- 2440
Query: 384 TGDTPGLEVPSSP 396
G +P+SP
Sbjct: 2441 ---AEGTSIPTSP 2450
Score = 30.4 bits (67), Expect = 3.9
Identities = 46/195 (23%), Positives = 72/195 (36%), Gaps = 21/195 (10%)
Query: 300 LTSSPIPGLEGRP--ERLPLVPESPRRMMTRSQDATFSPGSEQAEK---------SPGPI 348
+ SS I L P P+ + R + + T P S +E S P+
Sbjct: 1702 VASSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSIPVSTTPV 1761
Query: 349 VSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRAR-LCS 407
+S S S++P+D P S + P T + T L +PL + L +
Sbjct: 1762 LSSEASTLSATPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPVSHTLVA 1821
Query: 408 SSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENG-GTEPDASAPAEPGWKAVLTILL 466
+S + T S + D S P V T S GT S P+E LT +
Sbjct: 1822 NSEASTLSTTPVDSNS------PVVTSTAVSSSPTPAEGTSIATSTPSE--GSTALTSIP 1873
Query: 467 AHKQSSQPAETDSMS 481
+ +ET+++S
Sbjct: 1874 VSTTTVASSETNTLS 1888
Score = 29.3 bits (64), Expect = 8.7
Identities = 45/199 (22%), Positives = 74/199 (37%), Gaps = 23/199 (11%)
Query: 300 LTSSPIPGLEGRP--ERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPG---------PI 348
+ SS I L P P+ + R + + T P S +E S P+
Sbjct: 2173 VASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPV 2232
Query: 349 VSRTRSWDSSSPVDRPEP------EAASPTTR--TRPVTRSMGTGDTPGLEVPSSPLRKA 400
V+ S S++PVD P +SPTT T T ++ G TP +P S A
Sbjct: 2233 VTSEASTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGTTPLTSIPVSHTLVA 2292
Query: 401 KRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKA 460
+ + + S++ S + F +++ P T S + G P P
Sbjct: 2293 -NSEVSTLSTTPVDSNTPFTTSTEASSPPPTAEGTSMPTSTSSEGNTPLTRMPVS---TT 2348
Query: 461 VLTILLAHKQSSQPAETDS 479
++ S+ PA+T +
Sbjct: 2349 MVASFETSTLSTTPADTST 2367
Score = 29.3 bits (64), Expect = 8.7
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 8/127 (6%)
Query: 332 ATFSPGSEQAEKSP---GPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTP 388
+T+S GS P P+ S S S++PVD P S + P T + T
Sbjct: 3098 STYSEGSTPLTGVPVSTTPVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTSEGTSMPTS 3157
Query: 389 GLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEP 448
S+PL + + SS D++ + TS P T S GT
Sbjct: 3158 TPSEGSTPLTYMPVSTMLVVSSEDSTLSATPVDTS-----TPVTTSTEATSSTTAEGTSI 3212
Query: 449 DASAPAE 455
S P+E
Sbjct: 3213 PTSTPSE 3219
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 38.1 bits (87), Expect = 0.019
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 319 PESPRRMMTRSQDATF-------SPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASP 371
P S +R +R+ A + SP + + +S P++SR RS +SPV R + +
Sbjct: 1846 PTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTS 1905
Query: 372 TTRTR------PVTRSMGTGDTPGLEVPSSPLR---KAKRARLCSSSSSDTSSRSFFDPT 422
TR R PV+R TP + S R +R+R + + SRS P
Sbjct: 1906 VTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPV 1965
Query: 423 SQHR 426
++ R
Sbjct: 1966 TRRR 1969
Score = 35.4 bits (80), Expect = 0.12
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 31/181 (17%)
Query: 299 GLTSSPIPGLEG-------------RPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSP 345
G+ S P PG+ +P L + + R + S ++ S S + S
Sbjct: 2492 GMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSS 2551
Query: 346 GPIVSRTRSWDSSSPVDRPEPEAA-----SPTTRTRPVTRSMGTGDTPGLEVPSSPLRKA 400
S + S DS +PE A SPT + R G +P A
Sbjct: 2552 SSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVRE-------GRPPEPTP---A 2601
Query: 401 KRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKA 460
KR R SSSSS +SS S +S + + S + + P +PA+PG +A
Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSP---SPAKPGPQA 2658
Query: 461 V 461
+
Sbjct: 2659 L 2659
Score = 33.9 bits (76), Expect = 0.35
Identities = 55/219 (25%), Positives = 85/219 (38%), Gaps = 33/219 (15%)
Query: 294 LDASFGLTSSPIPGLEGRPERLPL-----VPESPRRM-MTRSQDATFSPGSEQAEKSPGP 347
L A+FG++ S + G P+R PE P+ + R ++ SP +Q +K
Sbjct: 135 LRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKK 194
Query: 348 IVSRTRSWDSSSP-----------VDRPEPEAA-----SPTTRTRPVTRSMGTGDTPGLE 391
R R +SSSP R E E+ SPT +++ ++ +
Sbjct: 195 --DRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRST- 251
Query: 392 VPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEPDAS 451
P+ R+A R+ S+SS +SRS S+ G+ G +
Sbjct: 252 TPAPKSRRAHRSTSADSASSSDTSRS----RSRSAAAKTHTTALAGRSPSPASGRRGEGD 307
Query: 452 AP-AEPGWKAV---LTILLAHKQSSQPAETDSMSLSEKS 486
AP +EPG + + A KQ S P E EKS
Sbjct: 308 APFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKS 346
Score = 32.0 bits (71), Expect = 1.3
Identities = 44/202 (21%), Positives = 74/202 (36%), Gaps = 29/202 (14%)
Query: 287 IESSMTDLDASFGLTSSPIPGLEGRP----ERLPLVPESPRRMMTRSQDATFSPGSEQAE 342
++S M+ + F SS P ++ RL + + +DAT SP ++ +
Sbjct: 1127 LKSGMSPEQSRFQSDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATASPPRQKDK 1186
Query: 343 KSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKR 402
SP P+ DRPE T P G G SSP K +
Sbjct: 1187 FSPFPV------------QDRPESSLVFKDTLRTPPRERSGAG--------SSPETKEQN 1226
Query: 403 ARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVL 462
+ L +SS + + + + + L E +E + ++S E L
Sbjct: 1227 SALPTSSQDE----ELMEVVEKSEEPAGQILSHLSSELKEMSTSNFESSPEVEERPAVSL 1282
Query: 463 TILLAHKQSS-QPAETDSMSLS 483
T+ + Q+S + E SM+ S
Sbjct: 1283 TLDQSQSQASLEAVEVPSMASS 1304
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 37.7 bits (86), Expect = 0.025
Identities = 52/206 (25%), Positives = 76/206 (36%), Gaps = 43/206 (20%)
Query: 289 SSMTDLDASFGLTSSPIPGLEGR-----PERLPLVPESPRRMMTRSQD----------AT 333
S+ TD + TS G + R PE P+VP +P + S D AT
Sbjct: 1212 STSTDRPVTSEPTSQATRGRKNRSSVKTPE--PVVPTAPELQPSTSTDQPVTSEPTYQAT 1269
Query: 334 FSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVP 393
+ + K+P P+V S+ DRP PT+RT +M + TP VP
Sbjct: 1270 RGRKNRSSVKTPEPVVPTAPELRPSTSTDRPV--TPKPTSRTTRSRTNMSSVKTPETVVP 1327
Query: 394 SS----------------PLRKAKRARLCSSSSSDTSSRSFFDP-------TSQHRDWCP 430
++ P + R+R SS + S P T Q P
Sbjct: 1328 TAPELQISTSTDQPVTPKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEP 1387
Query: 431 WVNITLGKESRENGGTEPDASAPAEP 456
T G+++R +G T P+ P P
Sbjct: 1388 TSRATRGRKNRSSGKT-PETLVPTAP 1412
Score = 36.2 bits (82), Expect = 0.071
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 21/154 (13%)
Query: 303 SPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVD 362
+P P PE P + + AT S + + K+P P+V S+ D
Sbjct: 1116 TPFPATSAAPEPHPSTSTAQPVTPKPTSQATRSRTNRSSVKTPEPVVPTAPELQPSTSTD 1175
Query: 363 RPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPT 422
+P + PT++ +S + TP VP++ L S+S+D S +PT
Sbjct: 1176 --QPVTSEPTSQVTRGRKSRSSVKTPETVVPTA-------LELQPSTSTDRPVTS--EPT 1224
Query: 423 SQHRDWCPWVNITLGKESRENGGTEPDASAPAEP 456
SQ T G+++R + T P+ P P
Sbjct: 1225 SQ---------ATRGRKNRSSVKT-PEPVVPTAP 1248
Score = 32.3 bits (72), Expect = 1.0
Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 27/148 (18%)
Query: 317 LVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPV--------DRPEPEA 368
+VP +P ++ S D +P +S ++ +S+ P+ +P
Sbjct: 1325 VVPTAPELQISTSTDQPVTPKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVT 1384
Query: 369 ASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDW 428
PT+R ++ +G TP VP++P +L S+S+D +PTSQ
Sbjct: 1385 PEPTSRATRGRKNRSSGKTPETLVPTAP-------KLEPSTSTDQPVTP--EPTSQ---- 1431
Query: 429 CPWVNITLGKESRENGGTEPDASAPAEP 456
T G+ +R + T P+ P P
Sbjct: 1432 -----ATRGRTNRSSVKT-PETVVPTAP 1453
Score = 30.0 bits (66), Expect = 5.1
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 31/150 (20%)
Query: 317 LVPESPRRMMTRSQDATFSPG----------SEQAEKSPGPIVSRTRSWDSSSPVDRPEP 366
+VP +P + S D +P + K+P +V +S+ D +P
Sbjct: 1448 VVPTAPELQPSTSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTD--QP 1505
Query: 367 EAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHR 426
+ PT+RT ++ + TP VP++P L S+S+D +PTS+
Sbjct: 1506 VTSEPTSRTTRGRKNRSSVKTPETVVPAAP-------ELQPSTSTDQPVTP--EPTSR-- 1554
Query: 427 DWCPWVNITLGKESRENGGTEPDASAPAEP 456
T G+ +R + T P++ P P
Sbjct: 1555 -------ATRGRTNRSSVKT-PESIVPIAP 1576
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 37.7 bits (86), Expect = 0.025
Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 17/124 (13%)
Query: 303 SPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSS---S 359
SP + E+ P S R +RS+ + SP + + SR+RS+ S
Sbjct: 260 SPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHR---SRSRSYSPRRRPS 316
Query: 360 PVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKR--ARLCSSSSSDTSSRS 417
P RP P +P R P R + SP+R+ +R A L SSSS +SSRS
Sbjct: 317 PRRRPSPRRRTPPRRMPPPPRHRRS---------RSPVRRRRRSSASLSGSSSSSSSSRS 367
Query: 418 FFDP 421
P
Sbjct: 368 RSPP 371
Score = 32.0 bits (71), Expect = 1.3
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 336 PGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSS 395
P + Q SP P+ R SSSP R SP+ TRP+ R T + ++ +S
Sbjct: 688 PRAPQTSSSPPPV----RRGASSSPQRRQ-----SPSPSTRPIRRVSRTPEPKKIKKAAS 738
Query: 396 P----LRKAKRARLCSSSSSDTSSRSFFDPT-----SQHRDWCPWVNITLGKESRENGGT 446
P +R+ +R S S + + P+ S +W P V + K +
Sbjct: 739 PSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPS--P 796
Query: 447 EPDASAPAEPGWK 459
P ++ E G K
Sbjct: 797 SPPRNSDQEGGGK 809
>gi|223029436 hypothetical protein LOC643376 [Homo sapiens]
Length = 712
Score = 37.4 bits (85), Expect = 0.032
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 312 PERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASP 371
P ++ L P + S+ ++ GS +PG + R RS + +P D+P+P ASP
Sbjct: 260 PRKIRLSRSKPSPGICTSKPSSILSGSSSVPATPGRRLWRQRSVNKETPEDKPKPGRASP 319
Query: 372 TTRTRPVTRSMGTGDTPGLEVPSSPLR 398
T G G T G S +R
Sbjct: 320 LQST---PNPSGLGKTGGSRKRSPEVR 343
Score = 30.4 bits (67), Expect = 3.9
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 362 DRPEPEAASPTTRTRPVTRSMGTGD--TPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFF 419
+R E SP V+ + G TP LE+ SS + +L SS DT RS+
Sbjct: 565 NRGPTELLSPLVMPSEVSEVLSVGGRWTPDLEITSSQPLDGQEDKLLHVSSLDTPQRSYG 624
Query: 420 DPTSQHRDW 428
D + +W
Sbjct: 625 DLSPPCSNW 633
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 37.0 bits (84), Expect = 0.042
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 300 LTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQA-EKSPGPIVSRTRSWDSS 358
LT S P L P P + S +T S T +P S S PI++R+ S +
Sbjct: 104 LTPSNTPTLT--PSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRS-STPTL 160
Query: 359 SPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDT---SS 415
+P RP +S T T T ++ TP L S+P + + SS+ T SS
Sbjct: 161 TPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSS 220
Query: 416 RSFFDPTS 423
R P+S
Sbjct: 221 RPILTPSS 228
Score = 35.0 bits (79), Expect = 0.16
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 300 LTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSS 359
LT S P L P P + S R ++TRS T +P S PI++ + S + +
Sbjct: 184 LTPSSTPTLT--PSSTPTLTPSSRPILTRSSTPTLTPSSR-------PILTPS-STPTLT 233
Query: 360 PVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRS 417
P RP +S T T T ++ +TP L ++P + SS+ T + S
Sbjct: 234 PSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPS 291
Score = 32.0 bits (71), Expect = 1.3
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
Query: 300 LTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSS 359
LT S P L P P + S +T S T +P S +P PI++R SS+
Sbjct: 42 LTPSSPPTLT--PSNTPTLTPSNTPTLTPSSTPTLTPSSTPT-LTPQPILTR-----SST 93
Query: 360 PVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRS 417
P P +SP T T T ++ +TP L ++P + SS+ T + S
Sbjct: 94 PTLTP----SSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPS 147
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 37.0 bits (84), Expect = 0.042
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 300 LTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQA-EKSPGPIVSRTRSWDSS 358
LT S P L P P + S +T S T +P S S PI++R+ S +
Sbjct: 104 LTPSNTPTLT--PSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRS-STPTL 160
Query: 359 SPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDT---SS 415
+P RP +S T T T ++ TP L S+P + + SS+ T SS
Sbjct: 161 TPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSS 220
Query: 416 RSFFDPTS 423
R P+S
Sbjct: 221 RPILTPSS 228
Score = 35.0 bits (79), Expect = 0.16
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 300 LTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSS 359
LT S P L P P + S R ++TRS T +P S PI++ + S + +
Sbjct: 184 LTPSSTPTLT--PSSTPTLTPSSRPILTRSSTPTLTPSSR-------PILTPS-STPTLT 233
Query: 360 PVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRS 417
P RP +S T T T ++ +TP L ++P + SS+ T + S
Sbjct: 234 PSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPS 291
Score = 32.0 bits (71), Expect = 1.3
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
Query: 300 LTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSS 359
LT S P L P P + S +T S T +P S +P PI++R SS+
Sbjct: 42 LTPSSPPTLT--PSNTPTLTPSNTPTLTPSSTPTLTPSSTPT-LTPQPILTR-----SST 93
Query: 360 PVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRS 417
P P +SP T T T ++ +TP L ++P + SS+ T + S
Sbjct: 94 PTLTP----SSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPS 147
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 37.0 bits (84), Expect = 0.042
Identities = 42/158 (26%), Positives = 54/158 (34%), Gaps = 17/158 (10%)
Query: 330 QDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRT-RPVTRSMGTGDTP 388
+ TF S + P S T S R P + TT P T S+ T
Sbjct: 2940 ESTTFPSSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTT 2999
Query: 389 GLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEP 448
P SP A SS S+ SS S P S H P T G EP
Sbjct: 3000 FYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSGLSQ------EP 3053
Query: 449 DASAPAEPGWKAVLTILLAHKQSSQPAETDSMSLSEKS 486
AS ++ +A L+ P T + SL ++S
Sbjct: 3054 TASHSSQGSTEATLS----------PGSTTASSLGQQS 3081
Score = 35.0 bits (79), Expect = 0.16
Identities = 41/158 (25%), Positives = 52/158 (32%), Gaps = 17/158 (10%)
Query: 330 QDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRT-RPVTRSMGTGDTP 388
+ TF S P S T S R P + TT P T S+ T
Sbjct: 4023 ESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTT 4082
Query: 389 GLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEP 448
P SP A SS S+ SS S P S H P T G EP
Sbjct: 4083 FYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSGLSQ------EP 4136
Query: 449 DASAPAEPGWKAVLTILLAHKQSSQPAETDSMSLSEKS 486
S ++ +A L+ P T + SL ++S
Sbjct: 4137 TTSHSSQGSTEATLS----------PGSTTASSLGQQS 4164
Score = 34.3 bits (77), Expect = 0.27
Identities = 35/131 (26%), Positives = 43/131 (32%), Gaps = 3/131 (2%)
Query: 330 QDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRT-RPVTRSMGTGDTP 388
+ TF S P S T S R P + TT P T S+ T
Sbjct: 1383 ESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTT 1442
Query: 389 GLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNIT--LGKESRENGGT 446
P SP A SS S+ SS S P S H P T L +E + +
Sbjct: 1443 FYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSS 1502
Query: 447 EPDASAPAEPG 457
+ A PG
Sbjct: 1503 QGSTEATLSPG 1513
Score = 33.5 bits (75), Expect = 0.46
Identities = 40/155 (25%), Positives = 54/155 (34%), Gaps = 9/155 (5%)
Query: 330 QDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRT-RPVTRSMGTGDTP 388
+ TF S + P S T S R P + TT P T S+ T
Sbjct: 2466 ESTTFPSSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTT 2525
Query: 389 GLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEP 448
P SP A SS S+ SS S P S H P T G +
Sbjct: 2526 FYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTPGL-------SRH 2578
Query: 449 DASAPAEPGWKAVLTILLAHKQSSQPAETDSMSLS 483
++ + PG T+L A +S P++ + S S
Sbjct: 2579 STTSHSSPG-STDTTLLPASTTTSGPSQESTTSHS 2612
Score = 29.6 bits (65), Expect = 6.7
Identities = 37/160 (23%), Positives = 55/160 (34%), Gaps = 17/160 (10%)
Query: 283 GFQQIESSMTDLDASFGLTSSPIPGLE---------GRPERLPLVPESPRRMMTRSQDAT 333
GF QI S + TS+ P G + + + S ++
Sbjct: 160 GFSQITGSTVNTSIGGNTTSASTPSSSDPFTTFSDYGVSVTFITGSTATKHFLDSSTNSG 219
Query: 334 FSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGL--- 390
S S + PG + S++ V EP+ + T+ + T G+ T GL
Sbjct: 220 HSEESTVSHSGPGATGTTLFPSHSATSVFVGEPKTSPITSASMETTALPGSTTTAGLSEK 279
Query: 391 -----EVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQH 425
P SP R AR SS S+ S+ S P H
Sbjct: 280 STTFYSSPRSPDRTLSPARTTSSGVSEKSTTSHSRPGPTH 319
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 37.0 bits (84), Expect = 0.042
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 303 SPIPGLEGRP-ERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPV 361
SP PG G P P +P SP M+ S T SP E +SPG ++ S+ +SP
Sbjct: 1566 SPTPGSPGSPGPSSPYIP-SPGGAMSPSYSPT-SPAYEP--RSPGGYTPQSPSYSPTSPS 1621
Query: 362 DRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDP 421
P + SPT+ T + +P P+SP +S S + + + P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1680
Query: 422 TS 423
TS
Sbjct: 1681 TS 1682
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 36.6 bits (83), Expect = 0.055
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 284 FQQIESS-MTDLDASFGLTS-SPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQA 341
FQ ++ M L A G + SP PG + +P+ P VP PR Q + PG E+
Sbjct: 707 FQALQQECMRQLQAPAGSPAPSPSPGGDDKPQVPPRVPIPPRPTRPHVQLSPAPPGEEET 766
Query: 342 EKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRP 377
+ PGP +SP P E SP P
Sbjct: 767 SQWPGP----------ASPPRVPPREPLSPQGSRTP 792
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 36.6 bits (83), Expect = 0.055
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 284 FQQIESS-MTDLDASFGLTS-SPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQA 341
FQ ++ M L A G + SP PG + +P+ P VP PR Q + PG E+
Sbjct: 785 FQALQQECMRQLQAPAGSPAPSPSPGGDDKPQVPPRVPIPPRPTRPHVQLSPAPPGEEET 844
Query: 342 EKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRP 377
+ PGP +SP P E SP P
Sbjct: 845 SQWPGP----------ASPPRVPPREPLSPQGSRTP 870
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 36.2 bits (82), Expect = 0.071
Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 34/204 (16%)
Query: 296 ASFGLTSSPIPGLEGRPERLPLVPESPRRMMTRS----------QDATFSPGSEQAEKSP 345
AS L +SP P +P P SP+ ++ + T P + SP
Sbjct: 1035 ASPKLAASPKPATSPKPLPSPKPSASPKPSLSAKPSVSTKLISKSNPTPKPTVSPSSSSP 1094
Query: 346 GPIVSRTRSWDSSSPVDRPEP----EAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAK 401
+V++ ++SPV + SPT P +R+ G T L+ PS
Sbjct: 1095 NALVAQGSHSSTNSPVHKQPSGMNISRQSPTLNLLPSSRTSGLPPTKNLQAPS------- 1147
Query: 402 RARLCSSSSSDTSSRSFFD------PTSQ----HRDWCPWVNITLGKESRENGGTEPDAS 451
+L +SSS+ T ++ P S+ + +++ G S G T+P S
Sbjct: 1148 --KLTNSSSTGTVGKNSLSGIAMNVPASRGSNLNSSGANRTSLSGGTGSGTQGATKP-LS 1204
Query: 452 APAEPGWKAVLTILLAHKQSSQPA 475
P P + +++ A QS+ A
Sbjct: 1205 TPHRPSTASGSSVVTASVQSTAGA 1228
>gi|25121980 dispatched B [Homo sapiens]
Length = 1401
Score = 35.8 bits (81), Expect = 0.093
Identities = 43/148 (29%), Positives = 56/148 (37%), Gaps = 29/148 (19%)
Query: 296 ASFGLTSSPIPGLEG--RPERLPLVPE--SPRRMMTRSQDATFSPGS---------EQAE 342
+S G +P PG EG RPE PL P+ SP T++ SP E
Sbjct: 8 SSGGSGPAPGPGPEGEQRPEGEPLAPDGGSPDSTQTKAVPPEASPERSCSLHSCPLEDPS 67
Query: 343 KSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKR 402
S GP + + PV P A + T R + G PGL R
Sbjct: 68 SSSGP----PPTTSTLQPVGPSSPLAPAHFTYPRALQEYQGGSSLPGL---------GDR 114
Query: 403 ARLCSSSSSDTSSRSFFDPTSQHRDWCP 430
A LCS SS + S + P+ + W P
Sbjct: 115 AALCSHGSSLSPSPA---PSQRDGTWKP 139
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 35.4 bits (80), Expect = 0.12
Identities = 43/167 (25%), Positives = 61/167 (36%), Gaps = 27/167 (16%)
Query: 312 PERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWD--------SSSPVDR 363
PER P PR TR+ T SPG + PGP ++ S + S + D
Sbjct: 990 PERRP-----PRPAATRTAPPTPSPGPSASPGPPGPALTSDSSRELTPHSALTSEATSDA 1044
Query: 364 PE--PEAASPTTRTRP------VTRSMGTGDT---PGLEVPSSPLRKAKRARLCSSSSSD 412
P+ P P +RT P ++ T D+ P L SP + +S S
Sbjct: 1045 PDTSPPTPDPASRTNPDLILTSPDFALSTPDSSVVPALTPEPSPTPLPTLPKELTSDPST 1104
Query: 413 TSSRSFFDPTSQ---HRDWCPWVNITLGKESRENGGTEPDASAPAEP 456
S + PTS+ D P ++ T + PD S P
Sbjct: 1105 PSEVTSLSPTSEQVPESDTTPDLDTTPYSSTVSEYSRSPDPSPSPHP 1151
Score = 31.2 bits (69), Expect = 2.3
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 327 TRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGD 386
T T SPGS + G S + W P P P A TRT P T S G
Sbjct: 961 TLGAGTTRSPGSPPTLRVHGDTGSPRKPWPERRP---PRPAA----TRTAPPTPSPGPSA 1013
Query: 387 TPGLEVPSSPLRKAKRARLCSSSSSDTS 414
+PG P P + +R + S+ TS
Sbjct: 1014 SPG---PPGPALTSDSSRELTPHSALTS 1038
>gi|13376611 zinc finger protein 703 [Homo sapiens]
Length = 590
Score = 35.4 bits (80), Expect = 0.12
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 21/130 (16%)
Query: 335 SPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPS 394
SP A+KSP ++++T S + +P+P +S +G PG P
Sbjct: 78 SPIELDAKKSPLALLAQT-----CSQIGKPDPPPSSKLNSVAAAANGLGAEKDPGRSAPG 132
Query: 395 SPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGG----TEPDA 450
+ A +L S + D SS F P S+ G +SR++ G + +
Sbjct: 133 AASAAAALKQLGDSPAEDKSS---FKPYSKGSG---------GGDSRKDSGSSSVSSTSS 180
Query: 451 SAPAEPGWKA 460
S+ + PG KA
Sbjct: 181 SSSSSPGDKA 190
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 35.4 bits (80), Expect = 0.12
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 5/113 (4%)
Query: 304 PIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDR 363
P PG R + P SP +R+ P + ++P P RS P R
Sbjct: 153 PPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRS-----PALR 207
Query: 364 PEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSR 416
P + P+ R R+ G G TP + P P + + + TSSR
Sbjct: 208 ETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCATRREEDMALRTRDRTSSR 260
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 34.7 bits (78), Expect = 0.21
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 320 ESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAA----SPTTRT 375
+S RR ++S+ + S + S SR+RS SSS R + S +++
Sbjct: 197 KSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKS 256
Query: 376 RPVTRSMGTGDTPGLEV----PSSPLRKAKRARLCSSSSSD-----TSSRSFFDPTSQHR 426
R +RS +P SSP R KR+R SSSS D T SRS P +HR
Sbjct: 257 RSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRS---PERRHR 313
>gi|130502162 RAS protein activator like 3 [Homo sapiens]
Length = 1011
Score = 34.7 bits (78), Expect = 0.21
Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 27/157 (17%)
Query: 286 QIESSMTDLDASFGLTSSPIPGL-----EGRPE------RLPLVPESPRRMMTRSQDATF 334
Q+ + +LD + T P+P + EG+P RLPL P ++ + F
Sbjct: 710 QLCTIFAELDQTTRDTLEPLPTILRAIEEGQPVLVSVPMRLPLPPAQVHSSLSAGEKPGF 769
Query: 335 SPGSEQAEKSPGPIVSRTRSWDS---SSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLE 391
+ + +P ++S+++S S S RP P+ P R RPV R+
Sbjct: 770 LAPRDLPKHTP--LISKSQSLRSVRRSESWARPRPDEERPLRRPRPVQRTQ--------- 818
Query: 392 VPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDW 428
S P+R+ R R + P + R W
Sbjct: 819 --SVPVRRPARRRQSAGPWPRPKGSLSMGPAPRARPW 853
>gi|22779860 forkhead box L1 [Homo sapiens]
Length = 345
Score = 34.7 bits (78), Expect = 0.21
Identities = 52/190 (27%), Positives = 72/190 (37%), Gaps = 40/190 (21%)
Query: 311 RPERLPLVPESPR-RMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSS-SPV-DRPEPE 367
+P+ P PE+ R R T + A P + GP +SR ++ + SP+ D P P
Sbjct: 144 KPKPGPGAPEAKRPRAETHQRSAEAQPEAGSGAGGSGPAISRLQAAPAGPSPLLDGPSPP 203
Query: 368 A-------ASPT---------TRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSS 411
A ASP V ++ TGD PG SPLR A R+ S SS
Sbjct: 204 APLHWPGTASPNEDAGDAAQGAAAVAVGQAARTGDGPG-----SPLRPASRS---SPKSS 255
Query: 412 DTSSRSFFDPTSQHRDWCPWVNITLGKESRE-NGGTEPDASAPAEPGWKAVLTILLAHKQ 470
D S D +I GK+ ++ G E A PG + ++L A
Sbjct: 256 DKSKSFSID------------SILAGKQGQKPPSGDELLGGAKPGPGGRLGASLLAASSS 303
Query: 471 SSQPAETDSM 480
P M
Sbjct: 304 LRPPFNASLM 313
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 34.3 bits (77), Expect = 0.27
Identities = 35/131 (26%), Positives = 43/131 (32%), Gaps = 3/131 (2%)
Query: 330 QDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRT-RPVTRSMGTGDTP 388
+ TF S P S T S R P + TT P T S+ T
Sbjct: 870 ESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTT 929
Query: 389 GLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNIT--LGKESRENGGT 446
P SP A SS S+ SS S P S H P T L +E + +
Sbjct: 930 FYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSS 989
Query: 447 EPDASAPAEPG 457
+ A PG
Sbjct: 990 QGSTEATLSPG 1000
>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
1 [Homo sapiens]
Length = 1250
Score = 34.3 bits (77), Expect = 0.27
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 312 PERLPLVPESPRRMMTRSQDATFSPGSEQAE------KSPGPIVSRTRSWDSSSPVDRPE 365
P +P P P + + D + SPG + ++ K P P R S SSS + PE
Sbjct: 932 PSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPE 991
Query: 366 PEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARL 405
P+ S + T +G +P E P K +L
Sbjct: 992 PKRPSVDSLVSKFTPPAESG-SPSKETLPPPAAPPKPGKL 1030
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 33.9 bits (76), Expect = 0.35
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 300 LTSSPIPGLEGRPERLPL---VPESPRRMMTRSQDATFSPGSEQAE-------KSPGPIV 349
++ P+P L RP R P P S + +Q AT P + A+ P P+
Sbjct: 1095 ISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVA 1154
Query: 350 SRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPG-----LEVPSSP 396
TR + P P P A TR +G +PG +E P SP
Sbjct: 1155 PPTR---PAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSP 1203
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 33.9 bits (76), Expect = 0.35
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 300 LTSSPIPGLEGRPERLPL---VPESPRRMMTRSQDATFSPGSEQAE-------KSPGPIV 349
++ P+P L RP R P P S + +Q AT P + A+ P P+
Sbjct: 1095 ISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVA 1154
Query: 350 SRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPG-----LEVPSSP 396
TR + P P P A TR +G +PG +E P SP
Sbjct: 1155 PPTR---PAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSP 1203
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 33.9 bits (76), Expect = 0.35
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 307 GLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEK-SPGPIVSRTRSW--DSSSPVDR 363
G G + PLV + P + S +T S GS A+K +P T+ W D+ +
Sbjct: 497 GSSGCLKGSPLVLKDPSLFSSLSASSTSSHGSSAAQKQNPSHTDQHTKHWRTDNWKTISS 556
Query: 364 P---EPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTS 414
P E + S +TRTR + S + + +E P+RK + R +S S S
Sbjct: 557 PAWSEVSSLSDSTRTRLTSESDYSSEGSSVE-SLKPVRKRQEHRKRASLSEKKS 609
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 33.9 bits (76), Expect = 0.35
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 320 ESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAA----SPTTRT 375
+S RR ++S+ + S + S SR+RS SSS R + S +++
Sbjct: 197 KSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKS 256
Query: 376 RPVTRSMGTGDTPGLEV----PSSPLRKAKRARLCSSSSSDTSSR 416
R +RS +P SSP R KR+R SSSS D R
Sbjct: 257 RSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKR 301
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,108,466
Number of Sequences: 37866
Number of extensions: 1167217
Number of successful extensions: 5211
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 4836
Number of HSP's gapped (non-prelim): 535
length of query: 502
length of database: 18,247,518
effective HSP length: 107
effective length of query: 395
effective length of database: 14,195,856
effective search space: 5607363120
effective search space used: 5607363120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.