Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PLEKHA7 Sequence: fasta or formatted (1121aa) NCBI GI: 239047795
Description:

pleckstrin homology domain containing, family A member 7

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         62           3
 C cysteine            0.9         10           1
 D aspartate           5.1         57           2
 E glutamate           7.3         82           2
 F phenylalanine       2.4         27           3
 G glycine             5.8         65           2
 H histidine           3.0         34           1
 I isoleucine          2.4         27           2
 K lysine              5.1         57           2
 L leucine             8.0         90           2
 M methionine          2.1         23           1
 N asparagine          2.6         29           1
 P proline             9.5        107           3
 Q glutamine           6.7         75           2
 R arginine            9.6        108           2
 S serine              9.8        110           3
 T threonine           4.9         55           2
 V valine              5.3         59           3
 W tryptophan          1.1         12           1
 Y tyrosine            2.9         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology domain containing, family A mem... 
PLEKHA5               0.183   pleckstrin homology domain containing, family A memb...
PLEKHA5               0.146   pleckstrin homology domain containing, family A mem...
PLEKHA6               0.133   phosphoinositol 3-phosphate-binding protein-3 
PLEKHA4               0.067   pleckstrin homology domain containing family A memb...
PLEKHA4               0.065   pleckstrin homology domain containing family A memb...
ITCH                  0.020   itchy homolog E3 ubiquitin protein ligase 
WWP1                  0.019   WW domain containing E3 ubiquitin protein ligase 1 [...
WWC1                  0.017   WW and C2 domain containing 1 isoform 3 
WWC1                  0.017   WW and C2 domain containing 1 isoform 2 
WWC1                  0.017   WW and C2 domain containing 1 isoform 1 
WWP2                  0.017   WW domain containing E3 ubiquitin protein ligase 2 i...
CCDC6                 0.016   coiled-coil domain containing 6 
CYTH2                 0.016   cytohesin 2 isoform 1 
WWC2                  0.015   WW and C2 domain containing 2 
NEDD4L                0.015   neural precursor cell expressed, developmentally do...
NEDD4L                0.015   neural precursor cell expressed, developmentally dow...
NEDD4L                0.015   neural precursor cell expressed, developmentally do...
NEDD4L                0.015   neural precursor cell expressed, developmentally do...
NEDD4L                0.015   neural precursor cell expressed, developmentally do...
NEDD4L                0.015   neural precursor cell expressed, developmentally do...
NEDD4L                0.015   neural precursor cell expressed, developmentally do...
NEDD4L                0.015   neural precursor cell expressed, developmentally do...
NEDD4L                0.015   neural precursor cell expressed, developmentally do...
WWOX                  0.015   WW domain-containing oxidoreductase isoform 1 
WWOX                  0.015   WW domain-containing oxidoreductase isoform 2 
CNKSR2                0.015   connector enhancer of kinase suppressor of Ras 2 [Ho...
CYTSA                 0.014   cytospin A 
CYTSA                 0.014   cytospin A 
ARHGAP24              0.014   Rho GTPase activating protein 24 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press