USP1 34373

Name: USP1	Sequence: fasta or formatted (785aa)		NCBI GI: 63053522
Description: ubiquitin specific protease 1		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt mRNA [785aa] ubiquitin specific protease 1 alt mRNA [785aa] ubiquitin specific protease 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.6 28 2 C cysteine 2.3 18 1 D aspartate 4.3 34 2 E glutamate 11.3 89 3 F phenylalanine 3.3 26 2 G glycine 5.6 44 3 H histidine 1.4 11 2 I isoleucine 4.7 37 2 K lysine 9.7 76 3 L leucine 9.6 75 2 M methionine 1.3 10 1 N asparagine 6.5 51 2 P proline 4.8 38 2 Q glutamine 4.2 33 1 R arginine 3.4 27 2 S serine 9.9 78 2 T threonine 5.5 43 2 V valine 5.5 43 2 W tryptophan 0.5 4 1 Y tyrosine 2.5 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific protease 1 USP1 1.000 ubiquitin specific protease 1 USP1 1.000 ubiquitin specific protease 1 USP12 0.041 ubiquitin thiolesterase 12 USP46 0.041 ubiquitin specific peptidase 46 isoform 2 USP46 0.041 ubiquitin specific peptidase 46 isoform 1 USP45 0.039 ubiquitin specific peptidase 45 USP16 0.036 ubiquitin specific protease 16 isoform a USP16 0.036 ubiquitin specific protease 16 isoform a USP16 0.035 ubiquitin specific protease 16 isoform b USP3 0.028 ubiquitin thiolesterase 3 USP8 0.027 ubiquitin specific peptidase 8 USP8 0.027 ubiquitin specific peptidase 8 USP8 0.027 ubiquitin specific peptidase 8 USP42 0.027 ubiquitin specific peptidase 42 USP44 0.027 ubiquitin thiolesterase 44 USP44 0.027 ubiquitin thiolesterase 44 USP36 0.026 ubiquitin specific peptidase 36 USP22 0.026 ubiquitin thiolesterase 22 USP51 0.026 ubiquitin specific protease 51 USP48 0.025 ubiquitin specific protease 48 isoform b USP48 0.025 ubiquitin specific protease 48 isoform a USP40 0.025 ubiquitin thioesterase 40 USP2 0.025 ubiquitin specific peptidase 2 isoform b USP2 0.025 ubiquitin specific peptidase 2 isoform a USP27X 0.025 X-linked ubiquitin thioesterase 27 USP49 0.023 ubiquitin thioesterase 49 USP21 0.023 ubiquitin-specific protease 21 USP21 0.023 ubiquitin-specific protease 21 LOC100288520 0.022 PREDICTED: hypothetical protein XP_002342486 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.