USP40 27635

Name: USP40	Sequence: fasta or formatted (1247aa)		NCBI GI: 41055953
Description: ubiquitin thioesterase 40		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 64 2 C cysteine 2.2 28 2 D aspartate 6.0 75 5 E glutamate 8.1 101 3 F phenylalanine 4.2 52 2 G glycine 6.3 79 2 H histidine 2.4 30 1 I isoleucine 5.1 63 2 K lysine 6.6 82 5 L leucine 12.7 158 4 M methionine 1.5 19 1 N asparagine 3.8 47 2 P proline 4.9 61 2 Q glutamine 5.4 67 2 R arginine 4.8 60 2 S serine 7.0 87 3 T threonine 4.6 57 1 V valine 5.1 63 2 W tryptophan 1.8 22 2 Y tyrosine 2.6 32 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin thioesterase 40 USP7 0.055 ubiquitin specific peptidase 7 USP47 0.054 ubiquitin specific protease 47 USP34 0.039 ubiquitin specific protease 34 USP24 0.036 ubiquitin specific protease 24 USP9Y 0.035 ubiquitin specific protease 9, Y-linked USP9X 0.035 ubiquitin specific protease 9, X-linked isoform 4 [... USP9X 0.035 ubiquitin specific protease 9, X-linked isoform 3 [... USP48 0.034 ubiquitin specific protease 48 isoform b USP48 0.034 ubiquitin specific protease 48 isoform a USP46 0.029 ubiquitin specific peptidase 46 isoform 2 USP46 0.029 ubiquitin specific peptidase 46 isoform 1 USP36 0.029 ubiquitin specific peptidase 36 USP42 0.027 ubiquitin specific peptidase 42 USP12 0.026 ubiquitin thiolesterase 12 LOC100287327 0.023 PREDICTED: hypothetical protein XP_002342475 LOC100287238 0.023 PREDICTED: hypothetical protein XP_002342474 LOC100287404 0.023 PREDICTED: hypothetical protein XP_002342477 LOC100287364 0.023 PREDICTED: hypothetical protein XP_002342476 LOC100287178 0.023 PREDICTED: hypothetical protein XP_002342472 LOC728379 0.023 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC728373 0.023 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC100287513 0.023 PREDICTED: hypothetical protein XP_002342480 LOC728419 0.023 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728405 0.023 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728400 0.023 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728393 0.023 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728379 0.023 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728373 0.023 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728369 0.023 PREDICTED: similar to deubiquitinating enzyme 3 [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.