Guide to the Human Genome
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Search of human proteins with 63003894

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|63003894 hypothetical protein LOC154467 [Homo sapiens]
         (97 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|63003894 hypothetical protein LOC154467 [Homo sapiens]             190   2e-49
gi|55770834 centromere protein F [Homo sapiens]                        38   0.002
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa...    37   0.003
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s...    37   0.003
gi|38045919 huntingtin interacting protein 1 [Homo sapiens]            36   0.008
gi|94429050 SEC22 vesicle trafficking protein homolog B [Homo sa...    35   0.013
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ...    35   0.013
gi|38348356 testis expressed 9 [Homo sapiens]                          34   0.029
gi|34878904 synaptonemal complex protein 1 [Homo sapiens]              33   0.037
gi|5454166 vesicle transport through interaction with t-SNAREs 1...    33   0.037
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]             33   0.049
gi|56961680 coiled-coil domain containing 147 [Homo sapiens]           33   0.064
gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo sap...    32   0.083
gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sap...    32   0.083
gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sap...    32   0.083
gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo sap...    32   0.083
gi|195947401 doublesex and mab-3 related transcription factor 2 ...    32   0.083
gi|5729806 doublesex and mab-3 related transcription factor 2 is...    32   0.083
gi|34577114 cytomatrix protein p110 [Homo sapiens]                     31   0.19 
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s...    31   0.24 
gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens]    31   0.24 
gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens]    31   0.24 
gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens]    31   0.24 
gi|148762940 DVL-binding protein DAPLE [Homo sapiens]                  31   0.24 
gi|41872583 Rho-associated, coiled-coil containing protein kinas...    30   0.32 
gi|4505257 moesin [Homo sapiens]                                       30   0.32 
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do...    30   0.32 
gi|203096856 kinesin family member 7 [Homo sapiens]                    30   0.32 
gi|57768564 hypothetical protein LOC23281 isoform b [Homo sapiens]     30   0.32 
gi|109134347 NY-REN-58 antigen [Homo sapiens]                          30   0.32 

>gi|63003894 hypothetical protein LOC154467 [Homo sapiens]
          Length = 97

 Score =  190 bits (482), Expect = 2e-49
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 1  MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKA 60
          MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKA
Sbjct: 1  MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKA 60

Query: 61 SNYEKELKFLRQENRKNMLLSVAIFILLTLVYAYWTM 97
          SNYEKELKFLRQENRKNMLLSVAIFILLTLVYAYWTM
Sbjct: 61 SNYEKELKFLRQENRKNMLLSVAIFILLTLVYAYWTM 97


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 5/73 (6%)

Query: 12   ALEIDGLEEKLSQCRRDLEAVNSRLHSRELSP----EARRSLEKEKNSLMNKASNYEKEL 67
            AL +   +E++ Q RR +E +  R+ + E       E  +  E+E +SL +K  N E+EL
Sbjct: 2104 ALRLSSTQEEVHQLRRGIEKLRVRIEADEKKQLHIAEKLKERERENDSLKDKVENLEREL 2163

Query: 68   KFLRQENRKNMLL 80
            + + +EN++ ++L
Sbjct: 2164 Q-MSEENQELVIL 2175



 Score = 26.2 bits (56), Expect = 6.0
 Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 7    ENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSREL----SPEARRSLEKEKNSLMNKASN 62
            ENL +   I+  + K+     +++ ++S+LH +E+      EA   LEK    L  + S+
Sbjct: 1782 ENLRLLHVIEDRDRKVESLLNEMKELDSKLHLQEVQLMTKIEACIELEKIVGELKKENSD 1841

Query: 63   YEKELKFLRQENRK 76
              ++L++   ++++
Sbjct: 1842 LSEKLEYFSCDHQE 1855


>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
           sapiens]
          Length = 1843

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 14  EIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFLRQE 73
           +I  LE +L     + + +   L   ++S +    LEKE  SL  + S  EK+ K L +E
Sbjct: 778 KIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKE 837

Query: 74  NRK 76
           N++
Sbjct: 838 NKR 840



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 1   MTKKKRENLGVALE-IDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNK 59
           + +KK  NL +  E I+ LE++ S+  R+   +   L S +       SLEKE + L  +
Sbjct: 643 LLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEE 702

Query: 60  ASNYEKELKFLRQENRK 76
                + ++ L+  + K
Sbjct: 703 NLELRRNVESLKCASMK 719


>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
           sapiens]
          Length = 1870

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 14  EIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFLRQE 73
           +I  LE +L     + + +   L   ++S +    LEKE  SL  + S  EK+ K L +E
Sbjct: 778 KIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKE 837

Query: 74  NRK 76
           N++
Sbjct: 838 NKR 840



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 1   MTKKKRENLGVALE-IDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNK 59
           + +KK  NL +  E I+ LE++ S+  R+   +   L S +       SLEKE + L  +
Sbjct: 643 LLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEE 702

Query: 60  ASNYEKELKFLRQENRK 76
                + ++ L+  + K
Sbjct: 703 NLELRRNVESLKCASMK 719


>gi|38045919 huntingtin interacting protein 1 [Homo sapiens]
          Length = 1037

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 9/82 (10%)

Query: 3   KKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEAR-----RSLEKEKNSLM 57
           +K +E L V   ++ L+++L+  +R+L+ +   L +   S EA        LEKE++SL+
Sbjct: 526 RKTQEQLEV---LESLKQELATSQRELQVLQGSLETSAQS-EANWAAEFAELEKERDSLV 581

Query: 58  NKASNYEKELKFLRQENRKNML 79
           + A++ E+EL  LR+E +   L
Sbjct: 582 SGAAHREEELSALRKELQDTQL 603


>gi|94429050 SEC22 vesicle trafficking protein homolog B [Homo
           sapiens]
          Length = 215

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 12/85 (14%)

Query: 23  SQCRRDLEAVNSRLHSREL-----------SPEARRSLEKEKNSLMNKASNYEKELKFLR 71
           S  RR+L ++N+ L   +              EA  +L+ + N+L + +  Y ++ K+L 
Sbjct: 129 SCARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLN 188

Query: 72  QENRKNMLLSVAIFILLTLVYA-YW 95
             +    L +VA+F ++ +VY  +W
Sbjct: 189 MHSTYAKLAAVAVFFIMLIVYVRFW 213


>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
            transmembrane signal), 1 [Homo sapiens]
          Length = 3259

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 16   DGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFLRQENR 75
            D +   L Q  +  E +      ++ + E  ++LE EKN+L+++ S  + ELK L++E  
Sbjct: 1833 DEINNYLQQIDQLKERIAGLEEEKQKNKEFSQTLENEKNTLLSQISTKDGELKMLQEEVT 1892

Query: 76   KNMLLSVAI 84
            K  LL+  I
Sbjct: 1893 KMNLLNQQI 1901


>gi|38348356 testis expressed 9 [Homo sapiens]
          Length = 391

 Score = 33.9 bits (76), Expect = 0.029
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 16  DGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFLRQENR 75
           DGL+++LS   R+LE   ++   ++ +  ++ + E   N  + +A  Y+ EL  LRQ N+
Sbjct: 265 DGLQQQLSSVERELE---NKRRLQKQAASSQSATEVRLNRALEEAEKYKLELSKLRQNNK 321


>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
          Length = 976

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 1   MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEK---NSLM 57
           +   K++   +  +I+ L+E  +Q R +LE V   L  ++   E +  L+K +   N+L 
Sbjct: 548 INNNKKQEERMLKQIENLQETETQLRNELEYVREEL--KQKRDEVKCKLDKSEENCNNLR 605

Query: 58  NKASNYEKELKFLRQENR 75
            +  N  K ++ L+QEN+
Sbjct: 606 KQVENKNKYIEELQQENK 623


>gi|5454166 vesicle transport through interaction with t-SNAREs 1B
           [Homo sapiens]
          Length = 232

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 44  EARRSLEKEKNSLMNKASNYEKELKFLRQENRK----NMLLSVAIFILLTLV 91
           E R  LE+ K+ L+N + N  K  K LR  +RK     +LLS+ I + L ++
Sbjct: 169 EQRDQLERTKSRLVNTSENLSKSRKILRSMSRKVTTNKLLLSIIILLELAIL 220



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 17  GLEEKLSQCRRDLEAVNSRLHSR--ELSPEARRSLEKEKNSLMNKASNYEKELKFLRQEN 74
           G EEK  +  RD +      +    E+  E R +    +N +M+K  NY K+L  L +E 
Sbjct: 37  GTEEK-KKLIRDFDEKQQEANETLAEMEEELRYAPLSFRNPMMSKLRNYRKDLAKLHREV 95

Query: 75  RKNML 79
           R   L
Sbjct: 96  RSTPL 100


>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
          Length = 1411

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 3   KKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRL-HSRELSPEARRSLEKEKNSLMNKAS 61
           +K++  L +  EI+ L  KL +  R L   + RL   R+LS E     E++   L  K S
Sbjct: 404 EKEQHGLQLQSEINQLHSKLLETERQLGEAHGRLKEQRQLSSEKLMDKEQQVADLQLKLS 463

Query: 62  NYEKELK 68
             E++LK
Sbjct: 464 RLEEQLK 470


>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
          Length = 872

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 10/75 (13%)

Query: 6   RENLGVALEIDGLEEKLSQCRRDL-------EAVNSRLHSRELSPEARRSLEKEKNSLMN 58
           +EN   ALE+   EE++ Q R D+       E ++ +LH  E   + +  +E+ K +L N
Sbjct: 300 QENQQKALELKAKEEEVHQMRLDIGKLNKIREQIHKKLHHTE---DQKAEVEQHKETLKN 356

Query: 59  KASNYEKELKFLRQE 73
           +    E+E++  +++
Sbjct: 357 QIVGLEREVEASKKQ 371


>gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo
           sapiens]
          Length = 436

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 16/64 (25%), Positives = 33/64 (51%)

Query: 18  LEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFLRQENRKN 77
           LE++L   +  LE  N +LH +++       L     +L++K   +++E + L+    K+
Sbjct: 302 LEQELESLKAVLEIKNEKLHQQDIKLMKMEKLVDNNTALVDKLKRFQQENEELKARMDKH 361

Query: 78  MLLS 81
           M +S
Sbjct: 362 MAIS 365


>gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sapiens]
          Length = 1270

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 16/64 (25%), Positives = 33/64 (51%)

Query: 18   LEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFLRQENRKN 77
            LE++L   +  LE  N +LH +++       L     +L++K   +++E + L+    K+
Sbjct: 1136 LEQELESLKAVLEIKNEKLHQQDIKLMKMEKLVDNNTALVDKLKRFQQENEELKARMDKH 1195

Query: 78   MLLS 81
            M +S
Sbjct: 1196 MAIS 1199


>gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sapiens]
          Length = 1216

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 16/64 (25%), Positives = 33/64 (51%)

Query: 18   LEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFLRQENRKN 77
            LE++L   +  LE  N +LH +++       L     +L++K   +++E + L+    K+
Sbjct: 1082 LEQELESLKAVLEIKNEKLHQQDIKLMKMEKLVDNNTALVDKLKRFQQENEELKARMDKH 1141

Query: 78   MLLS 81
            M +S
Sbjct: 1142 MAIS 1145


>gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo
           sapiens]
          Length = 517

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 16/64 (25%), Positives = 33/64 (51%)

Query: 18  LEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFLRQENRKN 77
           LE++L   +  LE  N +LH +++       L     +L++K   +++E + L+    K+
Sbjct: 383 LEQELESLKAVLEIKNEKLHQQDIKLMKMEKLVDNNTALVDKLKRFQQENEELKARMDKH 442

Query: 78  MLLS 81
           M +S
Sbjct: 443 MAIS 446


>gi|195947401 doublesex and mab-3 related transcription factor 2
           isoform 1 [Homo sapiens]
          Length = 226

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 14/50 (28%), Positives = 28/50 (56%)

Query: 46  RRSLEKEKNSLMNKASNYEKELKFLRQENRKNMLLSVAIFILLTLVYAYW 95
           R+   ++K  L  K +N+E++  + RQ    ++L    + +LL L Y+Y+
Sbjct: 170 RQQATEDKKGLSGKQNNFERKAVYQRQVRAPSLLAKSILEVLLGLFYSYY 219


>gi|5729806 doublesex and mab-3 related transcription factor 2
           isoform 1 [Homo sapiens]
          Length = 226

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 14/50 (28%), Positives = 28/50 (56%)

Query: 46  RRSLEKEKNSLMNKASNYEKELKFLRQENRKNMLLSVAIFILLTLVYAYW 95
           R+   ++K  L  K +N+E++  + RQ    ++L    + +LL L Y+Y+
Sbjct: 170 RQQATEDKKGLSGKQNNFERKAVYQRQVRAPSLLAKSILEVLLGLFYSYY 219


>gi|34577114 cytomatrix protein p110 [Homo sapiens]
          Length = 957

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 1   MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRE-------LSPEARRSLEKEK 53
           ++KK+ E L +  +++ L  + S C++ +E +   L ++E          +A R   +EK
Sbjct: 443 LSKKESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEK 502

Query: 54  NSLMNKASNYEKELKFLRQE 73
            S +NK +   K+L+ L +E
Sbjct: 503 ESFLNKKT---KQLQDLTEE 519


>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
            sapiens]
          Length = 1935

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 26   RRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFLRQENRKNML 79
            ++ L+ + +R+   E   EA +    E    M K+    KEL +  +E+RKN+L
Sbjct: 1809 KKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLL 1862



 Score = 25.8 bits (55), Expect = 7.8
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 20/67 (29%)

Query: 1   MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKA 60
           +T KKR+          LE++ S+ +RD++ +   L            +EKEK++  NK 
Sbjct: 936 LTAKKRK----------LEDECSELKRDIDDLELTL----------AKVEKEKHATENKV 975

Query: 61  SNYEKEL 67
            N  +E+
Sbjct: 976 KNLTEEM 982


>gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens]
          Length = 1197

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 17/60 (28%), Positives = 32/60 (53%)

Query: 1   MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKA 60
           M +K++E   + LE++ L+ + +  ++ LEAVN  + S E   E   +   +    +NKA
Sbjct: 812 MKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEVMAAEVAKNKESVNKA 871


>gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens]
          Length = 1197

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 17/60 (28%), Positives = 32/60 (53%)

Query: 1   MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKA 60
           M +K++E   + LE++ L+ + +  ++ LEAVN  + S E   E   +   +    +NKA
Sbjct: 812 MKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEVMAAEVAKNKESVNKA 871


>gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens]
          Length = 1197

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 17/60 (28%), Positives = 32/60 (53%)

Query: 1   MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKA 60
           M +K++E   + LE++ L+ + +  ++ LEAVN  + S E   E   +   +    +NKA
Sbjct: 812 MKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEVMAAEVAKNKESVNKA 871


>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
          Length = 2028

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 21/60 (35%), Positives = 30/60 (50%)

Query: 14  EIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFLRQE 73
           E+  LE +    RRDLEA+       E + + R++LE+E   L       EKE K L Q+
Sbjct: 788 ELGELEAERQALRRDLEALRLANAQLEGAEKDRKALEQEVAQLEKDKKLLEKEAKRLWQQ 847


>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
           [Homo sapiens]
          Length = 1388

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 18/83 (21%)

Query: 2   TKKKRENLGVALEIDGLEEKLS---QCRRDLE----AVNSRLH--SRELSPE-------- 44
           ++K  E+  +  ++  LEE LS   Q + +LE    +VN+RL   ++EL  E        
Sbjct: 436 SRKNEESQEIQKKLYTLEEHLSNEMQAKEELEQKCKSVNTRLEKTAKELEEEITLRKSVE 495

Query: 45  -ARRSLEKEKNSLMNKASNYEKE 66
            A R LE+EK  L +K + Y+++
Sbjct: 496 SALRQLEREKALLQHKNAEYQRK 518



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 11  VALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELKFL 70
           + L+I+   +K    + DL+    ++++ ++S    + L++E N LM    N EK+   L
Sbjct: 792 LTLKIEQETQKRCLTQNDLKMQTQQVNTLKMS---EKQLKQENNHLMEMKMNLEKQNAEL 848

Query: 71  RQENR 75
           R+E +
Sbjct: 849 RKERQ 853


>gi|4505257 moesin [Homo sapiens]
          Length = 577

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 16/73 (21%), Positives = 35/73 (47%)

Query: 1   MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKA 60
           M ++K + + V        E+  Q + +   + +    RE++ + +  +E+EK  LM + 
Sbjct: 292 MRRRKPDTIEVQQMKAQAREEKHQKQMERAMLENEKKKREMAEKEKEKIEREKEELMERL 351

Query: 61  SNYEKELKFLRQE 73
              E++ K  +QE
Sbjct: 352 KQIEEQTKKAQQE 364


>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
           domain 1 [Homo sapiens]
          Length = 1412

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 7/71 (9%)

Query: 14  EIDGLEEKLSQCRRDLEAVNSR-------LHSRELSPEARRSLEKEKNSLMNKASNYEKE 66
           E+  L+ +       LEA+ SR       L   +   E R + EKE      +  + EKE
Sbjct: 369 EVSHLKSQNKDKDHQLEALGSRCSVLKEELKQEDAHRELREAQEKELKLCKTQIQDMEKE 428

Query: 67  LKFLRQENRKN 77
           +K LR E RK+
Sbjct: 429 MKKLRAELRKS 439



 Score = 25.8 bits (55), Expect = 7.8
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 9    LGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNKASNYEKELK 68
            L    EI   +E + + R+DL   +SR+         ++ +E E+N ++       KEL 
Sbjct: 998  LAAQKEILSQQEVIMKLRKDLTEAHSRMSDLRGELNEKQKMELEQNVVL--VQQQSKELS 1055

Query: 69   FLRQE 73
             L+++
Sbjct: 1056 VLKEK 1060


>gi|203096856 kinesin family member 7 [Homo sapiens]
          Length = 1343

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 17/45 (37%), Positives = 24/45 (53%)

Query: 15  IDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNK 59
           +D   EK+ Q RR LE +   LH RE     + +L +EK  L +K
Sbjct: 915 LDQEMEKVLQQRRALEELGEELHKREAILAKKEALMQEKTGLESK 959


>gi|57768564 hypothetical protein LOC23281 isoform b [Homo sapiens]
          Length = 348

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 8/75 (10%)

Query: 1   MTKKKRENLGVALE-IDGLEEKLSQCRRDLEAVNSRLHSRELSPEARRSLEKEKNSLMNK 59
           + K   E L +AL     LEE +   ++ LE  N ++H +E     ++ LE EK  L  K
Sbjct: 196 LRKNTEEQLEIALAPYQHLEEDMKSLKQVLEMKNQQIHEQE-----KKILELEK--LAEK 248

Query: 60  ASNYEKELKFLRQEN 74
               E++++ L+Q+N
Sbjct: 249 NIILEEKIQVLQQQN 263


>gi|109134347 NY-REN-58 antigen [Homo sapiens]
          Length = 701

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 8/77 (10%)

Query: 6   RENLGVALEIDGLEEKLSQCRRDLEAVNS------RLHSRELSPEAR--RSLEKEKNSLM 57
           RE + +  ++ GLE ++++ + + E   +      R+  R+L+      RSLE EK S  
Sbjct: 215 REKVYLCQKLKGLEAEVAELKAEKENSEAQVENAQRIQVRQLAEMQATVRSLEAEKQSAN 274

Query: 58  NKASNYEKELKFLRQEN 74
            +A   EKEL+   ++N
Sbjct: 275 LRAERLEKELQSSSEQN 291


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.129    0.346 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,087,075
Number of Sequences: 37866
Number of extensions: 113123
Number of successful extensions: 1301
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 1086
Number of HSP's gapped (non-prelim): 324
length of query: 97
length of database: 18,247,518
effective HSP length: 68
effective length of query: 29
effective length of database: 15,672,630
effective search space: 454506270
effective search space used: 454506270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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