Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TEX9 Sequence: fasta or formatted (391aa) NCBI GI: 38348356
Description:

testis expressed 9

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         22           2
 C cysteine            1.0          4           1
 D aspartate           5.6         22           2
 E glutamate          11.5         45           3
 F phenylalanine       2.8         11           1
 G glycine             3.6         14           1
 H histidine           1.5          6           1
 I isoleucine          4.6         18           2
 K lysine             11.5         45           2
 L leucine             9.7         38           2
 M methionine          2.3          9           1
 N asparagine          5.1         20           2
 P proline             3.6         14           3
 Q glutamine           7.4         29           3
 R arginine            4.9         19           2
 S serine              7.7         30           2
 T threonine           3.8         15           1
 V valine              5.6         22           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testis expressed 9 
MYH13                 0.066   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH2                  0.062   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.062   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH15                 0.061   myosin, heavy polypeptide 15 
MYH4                  0.060   myosin, heavy polypeptide 4, skeletal muscle 
MYH8                  0.055   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH3                  0.054   myosin, heavy chain 3, skeletal muscle, embryonic [H...
SMC1B                 0.054   SMC1 structural maintenance of chromosomes 1-like 2 ...
EPS15                 0.046   epidermal growth factor receptor pathway substrate 15...
TRIP11                0.046   thyroid hormone receptor interactor 11 
MYH6                  0.046   myosin heavy chain 6 
MYH11                 0.046   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.046   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.046   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.046   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
EEA1                  0.046   early endosome antigen 1, 162kD 
SMC1A                 0.045   structural maintenance of chromosomes 1A 
MYH7B                 0.045   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
CENPE                 0.043   centromere protein E 
EPS15                 0.042   epidermal growth factor receptor pathway substrate ...
ROCK1                 0.039   Rho-associated, coiled-coil containing protein kinase...
LEKR1                 0.039   leucine, glutamate and lysine rich 1 
KIF5A                 0.039   kinesin family member 5A 
MYH9                  0.039   myosin, heavy polypeptide 9, non-muscle 
MYH10                 0.039   myosin, heavy polypeptide 10, non-muscle 
TPM3                  0.038   tropomyosin 3 isoform 1 
TPM2                  0.038   tropomyosin 2 (beta) isoform 2 
KIF21A                0.038   kinesin family member 21A 
ANKRD26               0.038   ankyrin repeat domain 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press