Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 62955829
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62955829 hypothetical protein LOC90871 [Homo sapiens]
(112 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62955829 hypothetical protein LOC90871 [Homo sapiens] 238 8e-64
gi|239756245 PREDICTED: hypothetical protein [Homo sapiens] 191 1e-49
gi|239750783 PREDICTED: hypothetical protein XP_002347553 [Homo ... 191 1e-49
gi|239745091 PREDICTED: hypothetical protein XP_002343358 [Homo ... 191 1e-49
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 36 0.006
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 36 0.006
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 35 0.013
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 32 0.083
gi|117938759 GNAS complex locus XLas [Homo sapiens] 32 0.083
gi|163965366 nascent polypeptide-associated complex alpha subuni... 32 0.083
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 32 0.11
gi|4758332 acyl-CoA synthetase long-chain family member 4 isofor... 32 0.11
gi|12669909 acyl-CoA synthetase long-chain family member 4 isofo... 32 0.11
gi|38788260 bromodomain PHD finger transcription factor isoform ... 32 0.11
gi|38788274 bromodomain PHD finger transcription factor isoform ... 32 0.11
gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4 ... 32 0.14
gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2 ... 32 0.14
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens] 32 0.14
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 32 0.14
gi|145386517 phostensin [Homo sapiens] 32 0.14
gi|199559805 phostensin [Homo sapiens] 32 0.14
gi|87578394 microtubule-associated protein 2 isoform 5 [Homo sap... 31 0.19
gi|87578396 microtubule-associated protein 2 isoform 1 [Homo sap... 31 0.19
gi|87578392 microtubule-associated protein 2 isoform 2 [Homo sap... 31 0.19
gi|87578255 microtubule-associated protein 2 isoform 4 [Homo sap... 31 0.19
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 31 0.19
gi|56118234 proline rich 6 [Homo sapiens] 31 0.19
gi|148727370 immediate early response 5-like [Homo sapiens] 31 0.19
gi|39812378 RAN binding protein 9 [Homo sapiens] 31 0.24
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 31 0.24
>gi|62955829 hypothetical protein LOC90871 [Homo sapiens]
Length = 112
Score = 238 bits (607), Expect = 8e-64
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 1 MGSRLSQPFESYITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMG 60
MGSRLSQPFESYITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMG
Sbjct: 1 MGSRLSQPFESYITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMG 60
Query: 61 AGGYVYWVARKPMKMGYPPSPWTITQMVIGLSIATWGIVVMADPKGKAYRVV 112
AGGYVYWVARKPMKMGYPPSPWTITQMVIGLSIATWGIVVMADPKGKAYRVV
Sbjct: 61 AGGYVYWVARKPMKMGYPPSPWTITQMVIGLSIATWGIVVMADPKGKAYRVV 112
>gi|239756245 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 191 bits (484), Expect = 1e-49
Identities = 89/112 (79%), Positives = 97/112 (86%), Gaps = 1/112 (0%)
Query: 2 GSRLSQPFESY-ITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMG 60
GS+LSQPFES I PP TAA PAKPA PATPG+PTSPAEH LL+TCWSC VLSGL LMG
Sbjct: 124 GSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLRLMG 183
Query: 61 AGGYVYWVARKPMKMGYPPSPWTITQMVIGLSIATWGIVVMADPKGKAYRVV 112
AGGYVYWVA+KPMKMGYPP PWTI +MV+GLSIA WGI+VMADPK KAY +V
Sbjct: 184 AGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
>gi|239750783 PREDICTED: hypothetical protein XP_002347553 [Homo
sapiens]
Length = 235
Score = 191 bits (484), Expect = 1e-49
Identities = 89/112 (79%), Positives = 97/112 (86%), Gaps = 1/112 (0%)
Query: 2 GSRLSQPFESY-ITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMG 60
GS+LSQPFES I PP TAA PAKPA PATPG+PTSPAEH LL+TCWSC VLSGL LMG
Sbjct: 124 GSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLRLMG 183
Query: 61 AGGYVYWVARKPMKMGYPPSPWTITQMVIGLSIATWGIVVMADPKGKAYRVV 112
AGGYVYWVA+KPMKMGYPP PWTI +MV+GLSIA WGI+VMADPK KAY +V
Sbjct: 184 AGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
>gi|239745091 PREDICTED: hypothetical protein XP_002343358 [Homo
sapiens]
Length = 216
Score = 191 bits (484), Expect = 1e-49
Identities = 89/112 (79%), Positives = 97/112 (86%), Gaps = 1/112 (0%)
Query: 2 GSRLSQPFESY-ITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMG 60
GS+LSQPFES I PP TAA PAKPA PATPG+PTSPAEH LL+TCWSC VLSGL LMG
Sbjct: 105 GSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLRLMG 164
Query: 61 AGGYVYWVARKPMKMGYPPSPWTITQMVIGLSIATWGIVVMADPKGKAYRVV 112
AGGYVYWVA+KPMKMGYPP PWTI +MV+GLSIA WGI+VMADPK KAY +V
Sbjct: 165 AGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 216
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 36.2 bits (82), Expect = 0.006
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 17/90 (18%)
Query: 6 SQPFESYITAPPGTAAAPAKPAPPATPGAPT---SPAEHRLLKTCWSCRVLSGLGLMGAG 62
+QP E PP A P +PAPP P P+ SPA R + G+G +
Sbjct: 1139 AQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTR--------KEFGGIGAPPSP 1190
Query: 63 GYVYWVARKPMKMGYPPSPWTITQMVIGLS 92
G VAR+ M+ P SP T + IG S
Sbjct: 1191 G----VARREMEA--PKSPGTTRKDNIGRS 1214
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 36.2 bits (82), Expect = 0.006
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 17/90 (18%)
Query: 6 SQPFESYITAPPGTAAAPAKPAPPATPGAPT---SPAEHRLLKTCWSCRVLSGLGLMGAG 62
+QP E PP A P +PAPP P P+ SPA R + G+G +
Sbjct: 1139 AQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTR--------KEFGGIGAPPSP 1190
Query: 63 GYVYWVARKPMKMGYPPSPWTITQMVIGLS 92
G VAR+ M+ P SP T + IG S
Sbjct: 1191 G----VARREMEA--PKSPGTTRKDNIGRS 1214
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 35.0 bits (79), Expect = 0.013
Identities = 16/25 (64%), Positives = 17/25 (68%)
Query: 21 AAPAKPAPPATPGAPTSPAEHRLLK 45
AAP APPA P P SPAE RL+K
Sbjct: 332 AAPEPAAPPAAPSPPDSPAEGRLVK 356
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 32.3 bits (72), Expect = 0.083
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 16 PPGTAAAPAKPAPP---ATPGAPTSPAEHR 42
PPG A A A P PP + PGAP SP R
Sbjct: 762 PPGPAPAAASPGPPPPASPPGAPASPRAPR 791
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 32.3 bits (72), Expect = 0.083
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 2 GSRLSQPFESYITAPPGTAAAPAKPAPPATPGAPTSPAE 40
G+ + P A P + AAPA PA P + AP +PA+
Sbjct: 414 GTAPADPDSGAFAADPDSGAAPAAPADPDSGAAPDAPAD 452
Score = 27.7 bits (60), Expect = 2.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 15 APPGTAAAPAKPAPPATPGAPTSPAE 40
A P + AAP PA P + AP +PA+
Sbjct: 439 ADPDSGAAPDAPADPDSGAAPDAPAD 464
Score = 26.6 bits (57), Expect = 4.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 15 APPGTAAAPAKPAPPATPGAPTSPA 39
A P + AAP PA P AP +PA
Sbjct: 451 ADPDSGAAPDAPADPDAGAAPEAPA 475
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 32.3 bits (72), Expect = 0.083
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 2 GSRLSQPFESYITAPPGTAAAPAKPAPPATP---GAPTSPA 39
GS + PF + PP K +P ATP GAPT+PA
Sbjct: 1021 GSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPA 1061
Score = 27.7 bits (60), Expect = 2.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 14 TAPPGTAAAPAKPAPPATPGAPTSPA 39
T PP A P PP+ G PT PA
Sbjct: 1326 TPPPKGAPTPPAVTPPSPKGTPTLPA 1351
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 14 TAPPGTAAAPAK-PAPPATPGAPTSP 38
T P T +P K PA PA G PTSP
Sbjct: 1615 TPPAVTPPSPEKGPATPAPKGTPTSP 1640
Score = 26.2 bits (56), Expect = 6.0
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 14 TAPPGTAAAP-AKPAPPATPGAPTSPA 39
T P T +P PA P+ GAPT PA
Sbjct: 1058 TTPAATLPSPKGGPATPSLKGAPTPPA 1084
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 15 APPGTAAAPAKP----APPATPGAPTSPA 39
AP AA P P A P+ GAPT+PA
Sbjct: 1171 APTTPAATPPSPKGGLATPSPKGAPTTPA 1199
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 15 APPGTAAAPAKP----APPATPGAPTSPA 39
AP AA P P A P+ GAPT+PA
Sbjct: 1194 APTTPAATPPSPKGGLATPSPKGAPTTPA 1222
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 15 APPGTAAAPAKP----APPATPGAPTSPA 39
AP AA P P A P+ GAPT+PA
Sbjct: 1217 APTTPAATPPSPKGGLATPSPKGAPTTPA 1245
Score = 26.2 bits (56), Expect = 6.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 14 TAPPGTAAAPAKPAPPATPGAPTSP 38
T+PP A P PP+ G+P +P
Sbjct: 1303 TSPPKGAPTPPAATPPSPKGSPGTP 1327
Score = 26.2 bits (56), Expect = 6.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 17 PGTAAAPAKPAPPATPGAPTSPA 39
P T+A PA P++ G PT PA
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPA 1469
Score = 25.8 bits (55), Expect = 7.8
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 8 PFESYITAPPGTAAAPAKPA--PPATPGAPTSPA 39
P I A P AP PA PP+ G P +P+
Sbjct: 925 PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPS 958
Score = 25.8 bits (55), Expect = 7.8
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 14 TAPPGTAAAP-AKPAPPATPGAPTSPA 39
T P T +P PA P+ GAPT PA
Sbjct: 964 TPPAATPPSPKGGPATPSPKGAPTPPA 990
Score = 25.8 bits (55), Expect = 7.8
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 14 TAPPGTAAAP-AKPAPPATPGAPTSPA 39
T P T +P PA P+ GAPT PA
Sbjct: 987 TPPAATPPSPKGGPATPSPKGAPTPPA 1013
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 6 SQPFESYITAPPGTAAAPAKPAPPATPGAPT---SPAEHR 42
+QP E PP A P +PAPP P P+ SPA R
Sbjct: 1100 AQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTR 1139
>gi|4758332 acyl-CoA synthetase long-chain family member 4 isoform 1
[Homo sapiens]
Length = 670
Score = 32.0 bits (71), Expect = 0.11
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 33 GAPTSPAEHRLLKTCWSCRVLSGLGL---MGAG 62
GAP SP HR + C+ C + G GL GAG
Sbjct: 402 GAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAG 434
>gi|12669909 acyl-CoA synthetase long-chain family member 4 isoform
2 [Homo sapiens]
Length = 711
Score = 32.0 bits (71), Expect = 0.11
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 33 GAPTSPAEHRLLKTCWSCRVLSGLGL---MGAG 62
GAP SP HR + C+ C + G GL GAG
Sbjct: 443 GAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAG 475
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 4 RLSQPFESYITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKT 46
+L+Q PP T A PA PAPP +P P + LL T
Sbjct: 2642 QLAQATAVAAPCPPVTPAPPAPPAPPPSPPPPPAVQHTGLLST 2684
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 5 LSQPFESYITAPPGTAAAPAKPAPPATPGAPTSP 38
L Q ++ A P PA PAPPA P +P P
Sbjct: 2640 LMQLAQATAVAAPCPPVTPAPPAPPAPPPSPPPP 2673
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Query: 16 PPGTAAAPAK----PAPPATPGAPTS 37
PP AAPA PAPP P PTS
Sbjct: 8 PPKQPAAPAAERCAPAPPPPPPPPTS 33
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 4 RLSQPFESYITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKT 46
+L+Q PP T A PA PAPP +P P + LL T
Sbjct: 2659 QLAQATAVAAPCPPVTPAPPAPPAPPPSPPPPPAVQHTGLLST 2701
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 5 LSQPFESYITAPPGTAAAPAKPAPPATPGAPTSP 38
L Q ++ A P PA PAPPA P +P P
Sbjct: 2657 LMQLAQATAVAAPCPPVTPAPPAPPAPPPSPPPP 2690
Score = 26.2 bits (56), Expect = 6.0
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Query: 16 PPGTAAAPAK----PAPPATPGAPTS 37
PP AAPA PAPP P PTS
Sbjct: 8 PPKQPAAPAAERCAPAPPPPPPPPTS 33
>gi|166235140 seizure related 6 homolog (mouse)-like 2 isoform 4
[Homo sapiens]
Length = 809
Score = 31.6 bits (70), Expect = 0.14
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 13 ITAPPGTAAAPAKPAPPATPGAPTSP 38
+T PPGT A P P PA+PG P P
Sbjct: 123 LTPPPGTTAPP--PPSPASPGPPLGP 146
>gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2
[Homo sapiens]
Length = 910
Score = 31.6 bits (70), Expect = 0.14
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 13 ITAPPGTAAAPAKPAPPATPGAPTSP 38
+T PPGT A P P PA+PG P P
Sbjct: 123 LTPPPGTTAPP--PPSPASPGPPLGP 146
>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
Length = 1352
Score = 31.6 bits (70), Expect = 0.14
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 16 PPGTAAAPAKPAPPATPGAPTSPA 39
PPG AAAP P P P +P PA
Sbjct: 95 PPGPAAAPTPPPCPPPPASPAPPA 118
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 31.6 bits (70), Expect = 0.14
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 3 SRLSQPFESYITAPPGTAAAPAKPAPPATPGAPTSP 38
SR+ P E + A PG P K P PGAP SP
Sbjct: 1460 SRMQFPME--MAAAPGRPGPPGKDGAPGRPGAPGSP 1493
Score = 29.6 bits (65), Expect = 0.54
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 9 FESYITAPPGTAAAPAKPAPPATPGAPTSP 38
+ S + P AAAP +P PP GAP P
Sbjct: 1458 YTSRMQFPMEMAAAPGRPGPPGKDGAPGRP 1487
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 14 TAPPGTAAAPAKPAPPATPGAPTSP 38
T G A P +P PP PG P P
Sbjct: 1319 TGERGLAGLPGQPGPPGHPGPPGEP 1343
Score = 25.8 bits (55), Expect = 7.8
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 11 SYITAPPGTAAAPAKPAPPATPGAPTSPAEHRL 43
S+ P G P P PP PG P + L
Sbjct: 900 SWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGL 932
>gi|145386517 phostensin [Homo sapiens]
Length = 613
Score = 31.6 bits (70), Expect = 0.14
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 2 GSRLSQPFESYITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMGA 61
G Q E+ PP AP P PPA P AP P + + + + + G+G
Sbjct: 411 GGLRQQEEEAVELQPP--PPAPLSPPPPA-PTAPQPPGDPLMSRLFYGVKAGPGVGAPRR 467
Query: 62 GGYVYWVARK----PMKMGYPPSPWTITQMVIG 90
G+ + V + P P SP T+ V G
Sbjct: 468 SGHTFTVNPRRSVPPATPATPTSPATVDAAVPG 500
>gi|199559805 phostensin [Homo sapiens]
Length = 613
Score = 31.6 bits (70), Expect = 0.14
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 2 GSRLSQPFESYITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMGA 61
G Q E+ PP AP P PPA P AP P + + + + + G+G
Sbjct: 411 GGLRQQEEEAVELQPP--PPAPLSPPPPA-PTAPQPPGDPLMSRLFYGVKAGPGVGAPRR 467
Query: 62 GGYVYWVARK----PMKMGYPPSPWTITQMVIG 90
G+ + V + P P SP T+ V G
Sbjct: 468 SGHTFTVNPRRSVPPATPATPTSPATVDAAVPG 500
>gi|87578394 microtubule-associated protein 2 isoform 5 [Homo
sapiens]
Length = 559
Score = 31.2 bits (69), Expect = 0.19
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 11 SYITAPPGTAAAPAKPAPPATPGAPTS 37
SY + PGT P+ P P TPG P S
Sbjct: 309 SYSSRTPGTPGTPSYPRTPHTPGTPKS 335
>gi|87578396 microtubule-associated protein 2 isoform 1 [Homo sapiens]
Length = 1827
Score = 31.2 bits (69), Expect = 0.19
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 11 SYITAPPGTAAAPAKPAPPATPGAPTS 37
SY + PGT P+ P P TPG P S
Sbjct: 1608 SYSSRTPGTPGTPSYPRTPHTPGTPKS 1634
>gi|87578392 microtubule-associated protein 2 isoform 2 [Homo
sapiens]
Length = 471
Score = 31.2 bits (69), Expect = 0.19
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 11 SYITAPPGTAAAPAKPAPPATPGAPTS 37
SY + PGT P+ P P TPG P S
Sbjct: 252 SYSSRTPGTPGTPSYPRTPHTPGTPKS 278
>gi|87578255 microtubule-associated protein 2 isoform 4 [Homo
sapiens]
Length = 502
Score = 31.2 bits (69), Expect = 0.19
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 11 SYITAPPGTAAAPAKPAPPATPGAPTS 37
SY + PGT P+ P P TPG P S
Sbjct: 252 SYSSRTPGTPGTPSYPRTPHTPGTPKS 278
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 31.2 bits (69), Expect = 0.19
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 6 SQPFESYITAPPGTAAAPAKPAPPATPGAPTSPAE 40
+QP E PP A P +PAPP P P+ ++
Sbjct: 1095 AQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGRSQ 1129
>gi|56118234 proline rich 6 [Homo sapiens]
Length = 272
Score = 31.2 bits (69), Expect = 0.19
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 16 PPGTAAAPAKPAPPATPGAPTSPAEH 41
PP A P P PP TP PTS A +
Sbjct: 80 PPELALLPPPPPPPPTPATPTSSASN 105
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 31.2 bits (69), Expect = 0.19
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 14 TAPPGTAAAPAKPAPPATPGAPTSPAEHR 42
+APPG A A +PPA+P +SP +R
Sbjct: 209 SAPPGAAPPAAAASPPASPAPASSPGFYR 237
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 30.8 bits (68), Expect = 0.24
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 16 PPGTAAAPAKPAPPATPGAPTSPA 39
PP TAA P P PP P + +PA
Sbjct: 76 PPATAAPPPPPPPPPPPASAAAPA 99
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 16 PPGTAAAPAKPAPPATPGAPTSP 38
PP +AAAPA PPA PG P
Sbjct: 91 PPASAAAPAS-GPPAPPGLAAGP 112
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 30.8 bits (68), Expect = 0.24
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 15 APPGTAAAPAKPAPPATPGAPTSPAEHR 42
APP A +P PP PGAP P R
Sbjct: 314 APPRPPPAARRPPPPPAPGAPARPLRGR 341
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,919,501
Number of Sequences: 37866
Number of extensions: 317530
Number of successful extensions: 7190
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 4674
Number of HSP's gapped (non-prelim): 2469
length of query: 112
length of database: 18,247,518
effective HSP length: 82
effective length of query: 30
effective length of database: 15,142,506
effective search space: 454275180
effective search space used: 454275180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.