Guide to the Human Genome
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Name: ACSL4 Sequence: fasta or formatted (711aa) NCBI GI: 12669909
Description:

acyl-CoA synthetase long-chain family member 4 isoform 2

Referenced in:

Fatty Acid Synthesis
Fatty Acid Oxidation and Ketone Bodies

Other entries for this name:
alt prot [670aa] acyl-CoA synthetase long-chain family member 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         43           2
 C cysteine            2.7         19           2
 D aspartate           4.2         30           1
 E glutamate           6.6         47           2
 F phenylalanine       3.2         23           1
 G glycine             7.9         56           2
 H histidine           1.7         12           2
 I isoleucine          7.3         52           2
 K lysine              9.0         64           3
 L leucine            10.0         71           3
 M methionine          3.1         22           2
 N asparagine          4.9         35           2
 P proline             5.2         37           2
 Q glutamine           2.7         19           2
 R arginine            3.4         24           2
 S serine              5.6         40           2
 T threonine           5.8         41           2
 V valine              5.6         40           2
 W tryptophan          1.0          7           1
 Y tyrosine            4.1         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA synthetase long-chain family member 4 isofo... 
ACSL4                 0.944   acyl-CoA synthetase long-chain family member 4 isofor...
ACSL3                 0.666   acyl-CoA synthetase long-chain family member 3 [Homo...
ACSL3                 0.666   acyl-CoA synthetase long-chain family member 3 [Homo...
ACSL5                 0.204   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.204   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.204   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL1                 0.201   acyl-CoA synthetase long-chain family member 1 [Homo...
ACSL6                 0.198   acyl-CoA synthetase long-chain family member 6 isofo...
ACSL6                 0.197   acyl-CoA synthetase long-chain family member 6 isofo...
ACSBG2                0.087   bubblegum-related acyl-CoA synthetase 2 
ACSBG1                0.078   lipidosin 
ACSF3                 0.027   acyl-CoA synthetase family member 3 
ACSF3                 0.027   acyl-CoA synthetase family member 3 
ACSF2                 0.024   acyl-CoA synthetase family member 2 
ACSM4                 0.016   acyl-CoA synthetase medium-chain family member 4 [H...
SLC27A2               0.014   solute carrier family 27 (fatty acid transporter), ...
ACSM2A                0.011   acyl-CoA synthetase medium-chain family member 2A [H...
SLC27A5               0.011   solute carrier family 27 (fatty acid transporter), m...
ACSS1                 0.011   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSS2                 0.010   acyl-CoA synthetase short-chain family member 2 isofo...
SLC27A4               0.010   solute carrier family 27 (fatty acid transporter), m...
SLC27A3               0.010   solute carrier family 27 member 3 
ACSM3                 0.009   SA hypertension-associated homolog isoform 1 
SLC27A1               0.008   solute carrier family 27, member 1 
ACSS2                 0.006   acyl-CoA synthetase short-chain family member 2 iso...
ACSM1                 0.006   acyl-CoA synthetase medium-chain family member 1 [H...
TCF20                 0.006   transcription factor 20 isoform 1 
C9orf123              0.005   hypothetical protein LOC90871 
SLC27A2               0.005   solute carrier family 27 (fatty acid transporter), ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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