LOC100129335 17490

Name: LOC100129335	Sequence: fasta or formatted (336aa)		NCBI GI: 239743086
Description: PREDICTED: Leucine-rich repeat-containing protein ENSP00000371558		Not currently referenced in the text
Other entries for this name: alt mRNA {336aa} PREDICTED: Leucine-rich repeat-containing protein ENSP00000371558 alt mRNA {336aa} PREDICTED: Leucine-rich repeat-containing protein ENSP00000371558 alt mRNA {336aa} PREDICTED: Leucine-rich repeat-containing protein ENSP00000371558
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 17 1 C cysteine 2.4 8 1 D aspartate 4.8 16 2 E glutamate 6.5 22 3 F phenylalanine 3.9 13 1 G glycine 4.2 14 2 H histidine 3.9 13 2 I isoleucine 4.5 15 2 K lysine 6.2 21 2 L leucine 12.2 41 3 M methionine 2.7 9 1 N asparagine 5.4 18 3 P proline 3.9 13 1 Q glutamine 3.3 11 1 R arginine 8.0 27 2 S serine 5.7 19 2 T threonine 6.0 20 1 V valine 6.5 22 2 W tryptophan 1.8 6 1 Y tyrosine 3.3 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: Leucine-rich repeat-containing protein E... LOC100129335 1.000 PREDICTED: Leucine-rich repeat-containing protein E... LOC100129335 1.000 PREDICTED: Leucine-rich repeat-containing protein E... LOC100129335 1.000 PREDICTED: Leucine-rich repeat-containing protein E... SNRPA1 0.054 small nuclear ribonucleoprotein polypeptide A' [Homo... LRRC49 0.045 leucine rich repeat containing 49 C10orf11 0.044 chromosome 10 open reading frame 11 LOC654258 0.044 PREDICTED: similar to leucine rich repeat containin... RABGGTA 0.044 Rab geranylgeranyltransferase alpha RABGGTA 0.044 Rab geranylgeranyltransferase alpha LRRC36 0.044 leucine rich repeat containing 36 isoform 1 LRRC48 0.041 leucine rich repeat containing 48 isoform b LRRC48 0.041 leucine rich repeat containing 48 isoform b LRRC48 0.041 leucine rich repeat containing 48 isoform a LRRC48 0.041 leucine rich repeat containing 48 isoform a PPP1R7 0.041 protein phosphatase 1, regulatory subunit 7 CEP110 0.035 centrosomal protein 110kDa CEP72 0.033 centrosomal protein 72 kDa LRGUK 0.033 leucine-rich repeats and guanylate kinase domain con... LRRC50 0.032 leucine rich repeat containing 50 PODNL1 0.030 podocan-like 1 isoform 3 PODNL1 0.030 podocan-like 1 isoform 2 PODNL1 0.030 podocan-like 1 isoform 1 SHOC2 0.030 soc-2 suppressor of clear homolog LRRC67 0.030 leucine rich repeat containing 67 LRRC6 0.030 leucine rich repeat containing 6 LRRIQ1 0.026 leucine-rich repeats and IQ motif containing 1 isof... LRRIQ1 0.026 leucine-rich repeats and IQ motif containing 1 isof... LRRC43 0.024 leucine rich repeat containing 43 isoform 1 ASPN 0.024 asporin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.