Guide to the Human Genome
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Name: ZNF2 Sequence: fasta or formatted (383aa) NCBI GI: 62865883
Description:

zinc finger protein 2 isoform b

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [425aa] zinc finger protein 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         12           1
 C cysteine            5.5         21           1
 D aspartate           4.2         16           1
 E glutamate           7.8         30           2
 F phenylalanine       4.4         17           2
 G glycine             7.0         27           1
 H histidine           6.3         24           1
 I isoleucine          2.9         11           1
 K lysine              7.8         30           2
 L leucine             6.0         23           1
 M methionine          1.0          4           1
 N asparagine          1.8          7           1
 P proline             4.7         18           1
 Q glutamine           5.5         21           1
 R arginine            8.6         33           3
 S serine             11.2         43           2
 T threonine           5.5         21           1
 V valine              3.4         13           1
 W tryptophan          0.8          3           1
 Y tyrosine            2.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 2 isoform b 
ZNF2                  1.000   zinc finger protein 2 isoform a 
ZNF184                0.434   zinc finger protein 184 
LOC344065             0.429   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.429   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.429   PREDICTED: similar to zinc finger protein 570 [Homo...
ZNF135                0.427   zinc finger protein 135 
ZNF157                0.425   zinc finger protein 157 
ZNF383                0.421   zinc finger protein 383 
ZNF454                0.421   zinc finger protein 454 
ZNF565                0.418   zinc finger protein 565 
ZNF565                0.418   zinc finger protein 565 
ZNF570                0.418   zinc finger protein 570 
ZNF25                 0.417   zinc finger protein 25 
ZNF470                0.417   zinc finger protein 470 
LOC647678             0.417   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.417   PREDICTED: hypothetical protein XP_002343697 
ZNF251                0.417   zinc finger protein 251 
LOC647678             0.416   PREDICTED: similar to zinc finger protein 347 [Homo...
ZNF250                0.416   zinc finger protein 250 isoform b 
ZNF250                0.416   zinc finger protein 250 isoform a 
DKFZp686E2433         0.413   hypothetical protein LOC345462 
ZNF420                0.407   zinc finger protein 420 
ZNF79                 0.407   zinc finger protein 79 
ZNF345                0.407   zinc finger protein 345 
ZNF140                0.406   zinc finger protein 140 
LOC100287429          0.405   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.405   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.405   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.405   zinc finger protein 84 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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