Guide to the Human Genome
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Name: ZNF250 Sequence: fasta or formatted (560aa) NCBI GI: 45387947
Description:

zinc finger protein 250 isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [555aa] zinc finger protein 250 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         24           3
 C cysteine            5.7         32           1
 D aspartate           2.7         15           1
 E glutamate           7.7         43           2
 F phenylalanine       3.0         17           1
 G glycine             7.0         39           1
 H histidine           7.5         42           2
 I isoleucine          3.6         20           2
 K lysine              6.8         38           2
 L leucine             7.7         43           2
 M methionine          1.1          6           2
 N asparagine          2.5         14           2
 P proline             5.4         30           1
 Q glutamine           6.6         37           2
 R arginine            5.9         33           2
 S serine              8.0         45           2
 T threonine           5.9         33           2
 V valine              5.2         29           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.9         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 250 isoform a 
ZNF250                0.986   zinc finger protein 250 isoform b 
ZNF135                0.480   zinc finger protein 135 
ZNF568                0.467   zinc finger protein 568 
ZNF184                0.465   zinc finger protein 184 
ZNF30                 0.460   zinc finger protein 30 isoform b 
ZNF569                0.459   zinc finger protein 569 
ZNF30                 0.457   zinc finger protein 30 isoform a 
ZNF30                 0.457   zinc finger protein 30 isoform a 
ZNF420                0.450   zinc finger protein 420 
ZNF93                 0.445   zinc finger protein 93 
LOC100287429          0.437   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.437   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.437   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF471                0.437   zinc finger protein 471 
ZNF84                 0.437   zinc finger protein 84 
ZNF84                 0.437   zinc finger protein 84 
ZNF546                0.436   zinc finger protein 546 
ZNF167                0.436   zinc finger protein 167 isoform 1 
ZNF583                0.436   zinc finger protein 583 
ZNF583                0.436   zinc finger protein 583 
ZNF583                0.436   zinc finger protein 583 
ZNF780A               0.434   zinc finger protein 780A isoform b 
ZNF780A               0.434   zinc finger protein 780A isoform b 
ZNF16                 0.431   zinc finger protein 16 
ZNF16                 0.431   zinc finger protein 16 
ZNF528                0.431   zinc finger protein 528 
ZNF780A               0.430   zinc finger protein 780A isoform a 
ZNF354A               0.429   zinc finger protein 354A 
ZNF502                0.427   zinc finger protein 502 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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