Guide to the Human Genome
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Name: ZNF2 Sequence: fasta or formatted (425aa) NCBI GI: 62865881
Description:

zinc finger protein 2 isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [383aa] zinc finger protein 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         15           2
 C cysteine            5.2         22           1
 D aspartate           4.5         19           1
 E glutamate           8.2         35           2
 F phenylalanine       4.5         19           2
 G glycine             6.4         27           1
 H histidine           5.6         24           1
 I isoleucine          2.8         12           1
 K lysine              7.3         31           2
 L leucine             5.9         25           1
 M methionine          1.2          5           1
 N asparagine          1.6          7           1
 P proline             4.7         20           1
 Q glutamine           5.4         23           1
 R arginine            8.5         36           3
 S serine             10.8         46           2
 T threonine           5.9         25           2
 V valine              4.7         20           2
 W tryptophan          0.9          4           1
 Y tyrosine            2.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 2 isoform a 
ZNF2                  0.905   zinc finger protein 2 isoform b 
ZNF184                0.438   zinc finger protein 184 
ZNF454                0.435   zinc finger protein 454 
ZNF383                0.423   zinc finger protein 383 
ZNF565                0.422   zinc finger protein 565 
ZNF565                0.422   zinc finger protein 565 
ZNF250                0.420   zinc finger protein 250 isoform b 
ZNF250                0.420   zinc finger protein 250 isoform a 
ZNF25                 0.419   zinc finger protein 25 
DKFZp686E2433         0.418   hypothetical protein LOC345462 
ZNF34                 0.414   zinc finger protein 34 
ZNF286A               0.412   zinc finger protein 286 
ZNF286A               0.412   zinc finger protein 286 
ZNF140                0.411   zinc finger protein 140 
ZNF251                0.408   zinc finger protein 251 
ZNF135                0.406   zinc finger protein 135 
ZNF568                0.406   zinc finger protein 568 
ZNF420                0.405   zinc finger protein 420 
ZNF461                0.399   gonadotropin inducible transcription repressor 1 [Ho...
ZFP14                 0.399   zinc finger protein 14-like 
ZNF619                0.398   zinc finger protein 619 isoform 2 
ZNF189                0.398   zinc finger protein 189 isoform 1 
ZNF566                0.397   zinc finger protein 566 isoform 1 
ZNF566                0.397   zinc finger protein 566 isoform 1 
ZNF566                0.397   zinc finger protein 566 isoform 1 
ZNF283                0.397   zinc finger protein 283 
ZNF773                0.396   zinc finger protein 773 
ZFP30                 0.396   zinc finger protein 30 homolog 
ZNF79                 0.394   zinc finger protein 79 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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