Guide to the Human Genome
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Name: DKFZp686E2433 Sequence: fasta or formatted (563aa) NCBI GI: 209870092
Description:

hypothetical protein LOC345462

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         20           1
 C cysteine            5.0         28           1
 D aspartate           1.4          8           1
 E glutamate           6.9         39           2
 F phenylalanine       4.6         26           2
 G glycine             6.9         39           1
 H histidine           6.4         36           2
 I isoleucine          5.7         32           2
 K lysine             10.7         60           2
 L leucine             6.6         37           2
 M methionine          1.4          8           1
 N asparagine          3.6         20           2
 P proline             3.0         17           1
 Q glutamine           5.3         30           2
 R arginine            6.0         34           2
 S serine              9.9         56           3
 T threonine           5.0         28           2
 V valine              4.1         23           1
 W tryptophan          0.7          4           1
 Y tyrosine            3.2         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC345462 
ZNF184                0.513   zinc finger protein 184 
ZNF354B               0.506   zinc finger protein 354B 
ZNF354A               0.502   zinc finger protein 354A 
ZNF471                0.495   zinc finger protein 471 
ZNF135                0.490   zinc finger protein 135 
ZNF470                0.489   zinc finger protein 470 
ZNF569                0.484   zinc finger protein 569 
ZNF93                 0.478   zinc finger protein 93 
ZNF583                0.478   zinc finger protein 583 
ZNF583                0.478   zinc finger protein 583 
ZNF583                0.478   zinc finger protein 583 
ZNF595                0.478   zinc finger protein 595 
ZNF568                0.476   zinc finger protein 568 
ZNF85                 0.476   zinc finger protein 85 
ZNF429                0.475   zinc finger protein 429 
ZNF354C               0.474   zinc finger protein 354C 
ZNF420                0.473   zinc finger protein 420 
ZNF160                0.471   zinc finger protein 160 
ZNF160                0.471   zinc finger protein 160 
ZNF160                0.471   zinc finger protein 160 
ZNF665                0.465   zinc finger protein 665 
ZNF624                0.465   zinc finger protein 624 
ZNF708                0.464   zinc finger protein 708 
ZNF287                0.462   zinc finger protein 287 
ZNF300                0.461   zinc finger protein 300 
ZNF98                 0.460   zinc finger protein 98 
ZNF91                 0.459   zinc finger protein 91 
ZNF527                0.458   zinc finger protein 527 
ZNF570                0.457   zinc finger protein 570 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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