Guide to the Human Genome
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Name: ZNF565 Sequence: fasta or formatted (499aa) NCBI GI: 109715833
Description:

zinc finger protein 565

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [499aa] zinc finger protein 565
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         20           1
 C cysteine            6.2         31           1
 D aspartate           3.0         15           1
 E glutamate           9.8         49           2
 F phenylalanine       4.6         23           1
 G glycine             7.8         39           1
 H histidine           7.4         37           2
 I isoleucine          5.2         26           1
 K lysine              7.4         37           1
 L leucine             6.0         30           2
 M methionine          1.2          6           1
 N asparagine          1.0          5           1
 P proline             3.6         18           1
 Q glutamine           6.6         33           1
 R arginine            7.2         36           2
 S serine              5.8         29           2
 T threonine           5.2         26           1
 V valine              3.8         19           2
 W tryptophan          1.0          5           1
 Y tyrosine            3.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 565 
ZNF565                1.000   zinc finger protein 565 
ZFP14                 0.580   zinc finger protein 14-like 
ZNF420                0.552   zinc finger protein 420 
ZFP30                 0.532   zinc finger protein 30 homolog 
ZNF461                0.531   gonadotropin inducible transcription repressor 1 [Ho...
ZNF383                0.530   zinc finger protein 383 
ZNF790                0.529   zinc finger protein 790 
ZFP82                 0.529   zinc finger protein 82 homolog 
ZNF582                0.528   zinc finger protein 582 
ZNF780B               0.525   zinc finger protein 780B 
ZNF283                0.514   zinc finger protein 283 
ZNF571                0.512   zinc finger protein 571 
ZNF780A               0.511   zinc finger protein 780A isoform b 
ZNF780A               0.511   zinc finger protein 780A isoform b 
ZNF184                0.509   zinc finger protein 184 
ZNF780A               0.508   zinc finger protein 780A isoform a 
ZNF546                0.508   zinc finger protein 546 
LOC100291520          0.507   PREDICTED: hypothetical protein XP_002347975 isofor...
ZNF583                0.495   zinc finger protein 583 
ZNF583                0.495   zinc finger protein 583 
ZNF583                0.495   zinc finger protein 583 
ZNF540                0.492   zinc finger protein 540 
ZNF98                 0.491   zinc finger protein 98 
ZNF570                0.490   zinc finger protein 570 
ZNF331                0.488   zinc finger protein 331 
ZNF345                0.488   zinc finger protein 345 
ZNF135                0.485   zinc finger protein 135 
ZNF30                 0.484   zinc finger protein 30 isoform b 
ZNF726                0.481   PREDICTED: zinc finger protein 726 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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