Guide to the Human Genome
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Name: ZNF250 Sequence: fasta or formatted (555aa) NCBI GI: 157952211
Description:

zinc finger protein 250 isoform b

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [560aa] zinc finger protein 250 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         24           3
 C cysteine            5.8         32           1
 D aspartate           2.7         15           1
 E glutamate           7.7         43           2
 F phenylalanine       2.9         16           1
 G glycine             7.0         39           1
 H histidine           7.6         42           2
 I isoleucine          3.6         20           2
 K lysine              6.8         38           2
 L leucine             7.6         42           2
 M methionine          1.1          6           2
 N asparagine          2.5         14           2
 P proline             5.2         29           1
 Q glutamine           6.5         36           2
 R arginine            5.9         33           2
 S serine              7.9         44           2
 T threonine           5.9         33           2
 V valine              5.2         29           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.9         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 250 isoform b 
ZNF250                0.995   zinc finger protein 250 isoform a 
ZNF135                0.484   zinc finger protein 135 
ZNF568                0.472   zinc finger protein 568 
ZNF184                0.465   zinc finger protein 184 
ZNF569                0.463   zinc finger protein 569 
ZNF30                 0.462   zinc finger protein 30 isoform b 
ZNF30                 0.458   zinc finger protein 30 isoform a 
ZNF30                 0.458   zinc finger protein 30 isoform a 
ZNF420                0.454   zinc finger protein 420 
ZNF93                 0.449   zinc finger protein 93 
ZNF471                0.444   zinc finger protein 471 
ZNF167                0.443   zinc finger protein 167 isoform 1 
LOC100287429          0.441   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.441   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.441   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.441   zinc finger protein 84 
ZNF84                 0.441   zinc finger protein 84 
ZNF546                0.440   zinc finger protein 546 
ZNF583                0.440   zinc finger protein 583 
ZNF583                0.440   zinc finger protein 583 
ZNF583                0.440   zinc finger protein 583 
ZNF780A               0.438   zinc finger protein 780A isoform b 
ZNF780A               0.438   zinc finger protein 780A isoform b 
ZNF16                 0.435   zinc finger protein 16 
ZNF16                 0.435   zinc finger protein 16 
ZNF528                0.435   zinc finger protein 528 
ZNF354A               0.435   zinc finger protein 354A 
ZNF780A               0.433   zinc finger protein 780A isoform a 
ZNF852                0.432   PREDICTED: zinc finger protein 852 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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