Guide to the Human Genome
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Name: LOC647678 Sequence: fasta or formatted (561aa) NCBI GI: 169213981
Description:

PREDICTED: similar to zinc finger protein 347

Not currently referenced in the text

Other entries for this name:
alt prot {561aa} PREDICTED: similar to zinc finger protein 347
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         23           1
 C cysteine            5.9         33           1
 D aspartate           2.7         15           2
 E glutamate           7.1         40           2
 F phenylalanine       2.7         15           1
 G glycine             8.0         45           1
 H histidine           8.6         48           2
 I isoleucine          3.9         22           1
 K lysine              8.6         48           2
 L leucine             4.6         26           3
 M methionine          0.7          4           1
 N asparagine          1.4          8           1
 P proline             3.6         20           1
 Q glutamine           7.3         41           1
 R arginine            5.2         29           2
 S serine              9.6         54           3
 T threonine           9.3         52           3
 V valine              2.7         15           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.7         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to zinc finger protein 347 [Homo... 
LOC647678             0.997   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.997   PREDICTED: hypothetical protein XP_002343697 
ZNF135                0.515   zinc finger protein 135 
ZNF420                0.498   zinc finger protein 420 
ZNF184                0.497   zinc finger protein 184 
ZNF665                0.492   zinc finger protein 665 
ZNF347                0.488   zinc finger protein 347 
ZNF470                0.480   zinc finger protein 470 
ZNF160                0.479   zinc finger protein 160 
ZNF160                0.479   zinc finger protein 160 
ZNF160                0.479   zinc finger protein 160 
ZNF429                0.470   zinc finger protein 429 
ZNF345                0.470   zinc finger protein 345 
ZNF658                0.469   zinc finger protein 658 
LOC100287429          0.467   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.467   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.467   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.467   zinc finger protein 84 
ZNF84                 0.467   zinc finger protein 84 
ZNF30                 0.466   zinc finger protein 30 isoform b 
ZNF30                 0.466   zinc finger protein 30 isoform a 
ZNF30                 0.466   zinc finger protein 30 isoform a 
ZNF595                0.463   zinc finger protein 595 
ZNF678                0.463   zinc finger protein 678 
ZNF43                 0.460   zinc finger protein 43 
ZNF85                 0.460   zinc finger protein 85 
ZNF93                 0.460   zinc finger protein 93 
ZNF23                 0.460   zinc finger protein 23 
ZNF208                0.459   zinc finger protein 208 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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