Guide to the Human Genome
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Name: ZNF25 Sequence: fasta or formatted (456aa) NCBI GI: 21918844
Description:

zinc finger protein 25

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         14           1
 C cysteine            5.9         27           1
 D aspartate           2.0          9           1
 E glutamate           9.6         44           2
 F phenylalanine       5.0         23           2
 G glycine             5.5         25           1
 H histidine           7.9         36           1
 I isoleucine          2.2         10           2
 K lysine             14.3         65           2
 L leucine             5.5         25           2
 M methionine          0.9          4           1
 N asparagine          2.6         12           1
 P proline             3.5         16           1
 Q glutamine           5.7         26           1
 R arginine            3.9         18           1
 S serine              5.9         27           2
 T threonine           7.9         36           2
 V valine              3.5         16           1
 W tryptophan          0.7          3           1
 Y tyrosine            4.4         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 25 
ZNF157                0.513   zinc finger protein 157 
ZNF12                 0.504   zinc finger protein 12 isoform b 
ZNF33B                0.491   zinc finger protein 33B 
ZNF12                 0.480   zinc finger protein 12 isoform a 
LOC100287429          0.479   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.479   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.479   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.479   zinc finger protein 84 
ZNF84                 0.479   zinc finger protein 84 
ZNF569                0.478   zinc finger protein 569 
ZNF383                0.473   zinc finger protein 383 
ZNF420                0.472   zinc finger protein 420 
ZNF568                0.472   zinc finger protein 568 
ZNF33A                0.471   zinc finger protein 33A isoform b 
ZNF33A                0.471   zinc finger protein 33A isoform a 
ZNF300                0.470   zinc finger protein 300 
ZNF182                0.469   zinc finger protein 21 isoform 2 
ZNF182                0.469   zinc finger protein 21 isoform 1 
ZNF585B               0.466   zinc finger protein 585B 
RBAK                  0.465   RB-associated KRAB repressor 
ZNF658                0.465   zinc finger protein 658 
ZNF436                0.464   zinc finger protein 436 
ZNF436                0.464   zinc finger protein 436 
ZNF546                0.457   zinc finger protein 546 
ZNF30                 0.457   zinc finger protein 30 isoform b 
ZFP2                  0.457   zinc finger protein 2 homolog 
ZNF85                 0.453   zinc finger protein 85 
ZNF544                0.451   zinc finger protein 544 
ZNF30                 0.451   zinc finger protein 30 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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