Guide to the Human Genome
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Name: ZNF84 Sequence: fasta or formatted (738aa) NCBI GI: 188497655
Description:

zinc finger protein 84

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [738aa] zinc finger protein 84
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8         21           1
 C cysteine            5.6         41           1
 D aspartate           3.5         26           2
 E glutamate           8.5         63           2
 F phenylalanine       5.1         38           2
 G glycine             6.6         49           1
 H histidine           6.9         51           2
 I isoleucine          4.3         32           3
 K lysine             10.7         79           2
 L leucine             5.8         43           2
 M methionine          1.1          8           2
 N asparagine          3.3         24           1
 P proline             3.8         28           1
 Q glutamine           5.3         39           1
 R arginine            5.8         43           1
 S serine              9.1         67           2
 T threonine           5.8         43           1
 V valine              2.0         15           1
 W tryptophan          0.8          6           1
 Y tyrosine            3.0         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 84 
LOC100287429          1.000   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          1.000   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          1.000   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 1.000   zinc finger protein 84 
ZNF268                0.549   zinc finger protein 268 
ZNF615                0.499   zinc finger protein 615 
ZNF605                0.496   zinc finger protein 605 
ZNF569                0.491   zinc finger protein 569 
ZNF585B               0.488   zinc finger protein 585B 
ZNF33B                0.484   zinc finger protein 33B 
ZNF184                0.480   zinc finger protein 184 
ZNF33A                0.472   zinc finger protein 33A isoform b 
ZNF160                0.467   zinc finger protein 160 
ZNF347                0.467   zinc finger protein 347 
ZNF160                0.467   zinc finger protein 160 
ZNF160                0.467   zinc finger protein 160 
ZNF41                 0.464   zinc finger protein 41 
ZNF41                 0.464   zinc finger protein 41 
ZNF624                0.461   zinc finger protein 624 
ZNF420                0.458   zinc finger protein 420 
ZNF585A               0.458   zinc finger protein 585A 
ZNF585A               0.458   zinc finger protein 585A 
ZNF33A                0.457   zinc finger protein 33A isoform a 
ZNF484                0.456   zinc finger protein 484 isoform a 
ZNF546                0.450   zinc finger protein 546 
ZNF470                0.444   zinc finger protein 470 
ZNF845                0.443   zinc finger protein 845 
ZNF658                0.442   zinc finger protein 658 
ZNF12                 0.440   zinc finger protein 12 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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