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Search of human proteins with 62543567
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
motif 17 [Homo sapiens]
(328 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ... 671 0.0
gi|8922792 nudix-type motif 15 [Homo sapiens] 44 3e-04
gi|41393549 nudix-type motif 10 [Homo sapiens] 39 0.006
gi|5729804 nudix-type motif 3 [Homo sapiens] 37 0.018
gi|20149583 nudix-type motif 6 isoform a [Homo sapiens] 37 0.031
gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens] 37 0.031
gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens] 36 0.041
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type... 36 0.041
gi|37221177 nudix-type motif 11 [Homo sapiens] 36 0.054
gi|22219467 nudix-type motif 2 [Homo sapiens] 35 0.070
gi|22219465 nudix-type motif 2 [Homo sapiens] 35 0.070
gi|4502125 nudix-type motif 2 [Homo sapiens] 35 0.070
gi|190883480 nudix (nucleoside diphosphate linked moiety X)-type... 34 0.20
gi|14150137 nudix (nucleoside diphosphate linked moiety X)-type ... 34 0.20
gi|41352705 kinesin family member 3C [Homo sapiens] 34 0.20
gi|190684699 nudix (nucleoside diphosphate linked moiety X)-type... 32 0.59
gi|239755528 PREDICTED: hypothetical protein [Homo sapiens] 32 1.0
gi|239750006 PREDICTED: hypothetical protein XP_002347235 [Homo ... 32 1.0
gi|239744317 PREDICTED: hypothetical protein XP_002343096 [Homo ... 32 1.0
gi|22538453 phosphatidylinositol glycan anchor biosynthesis, cla... 32 1.0
gi|37594461 nudix-type motif 6 isoform b [Homo sapiens] 31 1.3
gi|183227703 mitochondrial translation optimization 1 homolog is... 31 1.3
gi|19882217 mitochondrial translation optimization 1 homolog iso... 31 1.3
gi|74024895 mitochondrial translation optimization 1 homolog iso... 31 1.3
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 31 1.7
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 31 1.7
gi|239755027 PREDICTED: hypothetical protein [Homo sapiens] 31 1.7
gi|239749540 PREDICTED: hypothetical protein [Homo sapiens] 31 1.7
gi|239743690 PREDICTED: hypothetical protein XP_002342947 [Homo ... 31 1.7
gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens] 30 2.9
>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
motif 17 [Homo sapiens]
Length = 328
Score = 671 bits (1731), Expect = 0.0
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 1 MAEVRVQLLLSRRPESVSFARSVCGLLGAGPGLGTWPIHCSLKRGRLVLSSRPFPGASAR 60
MAEVRVQLLLSRRPESVSFARSVCGLLGAGPGLGTWPIHCSLKRGRLVLSSRPFPGASAR
Sbjct: 1 MAEVRVQLLLSRRPESVSFARSVCGLLGAGPGLGTWPIHCSLKRGRLVLSSRPFPGASAR 60
Query: 61 LPLQRPPFCPFAALEERPRVPGAELPTDRGVDLGVAVILQSSDKTVLLTRRARTLSVSPN 120
LPLQRPPFCPFAALEERPRVPGAELPTDRGVDLGVAVILQSSDKTVLLTRRARTLSVSPN
Sbjct: 61 LPLQRPPFCPFAALEERPRVPGAELPTDRGVDLGVAVILQSSDKTVLLTRRARTLSVSPN 120
Query: 121 LWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLWESAYPPRLSWGLPKYH 180
LWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLWESAYPPRLSWGLPKYH
Sbjct: 121 LWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLWESAYPPRLSWGLPKYH 180
Query: 181 HIVLYLLVISQESQQQLQARIQPNPNEVSALMWLTPDVAAAVAAAEDGTETPGLLPQDLP 240
HIVLYLLVISQESQQQLQARIQPNPNEVSALMWLTPDVAAAVAAAEDGTETPGLLPQDLP
Sbjct: 181 HIVLYLLVISQESQQQLQARIQPNPNEVSALMWLTPDVAAAVAAAEDGTETPGLLPQDLP 240
Query: 241 PSVLAVELEEDGRARPLVLHMSTLLRMIPTMAEDKERVSTGTKFALKLWLQHLGRTPPPC 300
PSVLAVELEEDGRARPLVLHMSTLLRMIPTMAEDKERVSTGTKFALKLWLQHLGRTPPPC
Sbjct: 241 PSVLAVELEEDGRARPLVLHMSTLLRMIPTMAEDKERVSTGTKFALKLWLQHLGRTPPPC 300
Query: 301 KSAAYLDPGPAKEEWNMDPLPPNQGSGK 328
KSAAYLDPGPAKEEWNMDPLPPNQGSGK
Sbjct: 301 KSAAYLDPGPAKEEWNMDPLPPNQGSGK 328
>gi|8922792 nudix-type motif 15 [Homo sapiens]
Length = 164
Score = 43.5 bits (101), Expect = 3e-04
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 90 GVDLGVAVILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGL 149
GV +GV V + VLL +R SV + PGGH+E E + RE WEE+ L
Sbjct: 13 GVGVGVVVTSCKHPRCVLLGKRKG--SVGAGSFQLPGGHLEFGETWEECAQRETWEEAAL 70
Query: 150 HLPQGQFSWVPLGLWESAYPPRLSWGLPKYHHIVLYLLVISQESQQQLQARIQPNPNE 207
HL F+ V E YH++ + + + ++P NE
Sbjct: 71 HLKNVHFASVVNSFIEK----------ENYHYVTILMKGEVDVTHDSEPKNVEPEKNE 118
>gi|41393549 nudix-type motif 10 [Homo sapiens]
Length = 164
Score = 38.9 bits (89), Expect = 0.006
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 119 PNLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLWESAYPPRLSWGLPK 178
P+ W+ PGG +E EEE +RE++EE+G+ G+ LG++E P+
Sbjct: 42 PDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRL----LGVFEQNQDPK------- 90
Query: 179 YHHIVLYLLVISQ 191
H +Y+L +++
Sbjct: 91 -HRTYVYVLTVTE 102
>gi|5729804 nudix-type motif 3 [Homo sapiens]
Length = 172
Score = 37.4 bits (85), Expect = 0.018
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Query: 102 SDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPL 161
S++ VLL +R P+ W+ PGG +E EEE +RE+ EE+G+ G+ +
Sbjct: 30 SEEEVLLVSSSR----HPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRL----V 81
Query: 162 GLWESAYPPRLSWGLPKYHHIVLYLLVISQ 191
G++E+ + H +Y+L++++
Sbjct: 82 GIFENQ---------ERKHRTYVYVLIVTE 102
>gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]
Length = 316
Score = 36.6 bits (83), Expect = 0.031
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 83 AELPTDRGVDLGVA-VILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLR 141
+ LP +GVA + S + +L+ + L N+W PGG E EE++ D +R
Sbjct: 134 SRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLK---NMWKFPGGLSEPEEDIGDTAVR 190
Query: 142 ELWEESGL 149
E++EE+G+
Sbjct: 191 EVFEETGI 198
>gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]
Length = 180
Score = 36.6 bits (83), Expect = 0.031
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 119 PNLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLWESAYPPRLSWGLPK 178
P+ W+ PGG +E EEE +RE++EE+G+ G+ LG++E+ +
Sbjct: 43 PDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRL----LGIFENQ---------DR 89
Query: 179 YHHIVLYLLVISQ 191
H +Y+L +++
Sbjct: 90 KHRTYVYVLTVTE 102
>gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]
Length = 181
Score = 36.2 bits (82), Expect = 0.041
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 119 PNLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLWESAYPPRLSWGLPK 178
P+ W+ PGG +E EEE +RE++EE+G+ G+ LG++E +
Sbjct: 43 PDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRL----LGIFEQ--------NQDR 90
Query: 179 YHHIVLYLLVISQ 191
H +Y+L +++
Sbjct: 91 KHRTYVYVLTVTE 103
>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
motif 18 [Homo sapiens]
Length = 323
Score = 36.2 bits (82), Expect = 0.041
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 30/129 (23%)
Query: 95 VAVILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGLH---- 150
+AV L D+ +L+ R S W P G +E E +++ RE+ EE+GLH
Sbjct: 47 LAVFLSEQDEVLLIQEAKRECRGS---WYLPAGRMEPGETIVEALQREVKEEAGLHCEPE 103
Query: 151 ----LPQGQFSWV-------PLG------------LWESAYPPRLSWGLPKYHHIVLYLL 187
+ + SWV P G ++A+ PR S P H +L+L+
Sbjct: 104 TLLSVEERGPSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHDILHLV 163
Query: 188 VISQESQQQ 196
++ + +QQ
Sbjct: 164 ELAAQYRQQ 172
>gi|37221177 nudix-type motif 11 [Homo sapiens]
Length = 164
Score = 35.8 bits (81), Expect = 0.054
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 119 PNLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPLGLWESAYPPRLSWGLPK 178
P+ W+ PGG +E EEE +RE++EE+G+ G+ LG++E +
Sbjct: 42 PDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRL----LGVFEQ--------NQDR 89
Query: 179 YHHIVLYLLVISQ 191
H +Y+L +++
Sbjct: 90 KHRTYVYVLTVTE 102
>gi|22219467 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 35.4 bits (80), Expect = 0.070
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 122 WVPPGGHVELEEELLDGGLRELWEESGLHLPQ 153
W PP GHVE E+ L+ LRE EE+G+ Q
Sbjct: 38 WTPPKGHVEPGEDDLETALRETQEEAGIEAGQ 69
>gi|22219465 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 35.4 bits (80), Expect = 0.070
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 122 WVPPGGHVELEEELLDGGLRELWEESGLHLPQ 153
W PP GHVE E+ L+ LRE EE+G+ Q
Sbjct: 38 WTPPKGHVEPGEDDLETALRETQEEAGIEAGQ 69
>gi|4502125 nudix-type motif 2 [Homo sapiens]
Length = 147
Score = 35.4 bits (80), Expect = 0.070
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 122 WVPPGGHVELEEELLDGGLRELWEESGLHLPQ 153
W PP GHVE E+ L+ LRE EE+G+ Q
Sbjct: 38 WTPPKGHVEPGEDDLETALRETQEEAGIEAGQ 69
>gi|190883480 nudix (nucleoside diphosphate linked moiety X)-type
motif 22 isoform a [Homo sapiens]
Length = 303
Score = 33.9 bits (76), Expect = 0.20
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 LGVAVILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGLHLP 152
LGV L ++D ++ RR+R ++ +P L PGGH E + L GG + + +G +
Sbjct: 121 LGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPE-PQALCPGGSPQHQDLAGQLVV 179
Query: 153 QGQFSWVPLGLWESAYPPRLSWGLP 177
FS V + + P L+ P
Sbjct: 180 HELFSSVLQEICDEVNLPLLTLSQP 204
>gi|14150137 nudix (nucleoside diphosphate linked moiety X)-type
motif 22 isoform a [Homo sapiens]
Length = 303
Score = 33.9 bits (76), Expect = 0.20
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 93 LGVAVILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGLHLP 152
LGV L ++D ++ RR+R ++ +P L PGGH E + L GG + + +G +
Sbjct: 121 LGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPE-PQALCPGGSPQHQDLAGQLVV 179
Query: 153 QGQFSWVPLGLWESAYPPRLSWGLP 177
FS V + + P L+ P
Sbjct: 180 HELFSSVLQEICDEVNLPLLTLSQP 204
>gi|41352705 kinesin family member 3C [Homo sapiens]
Length = 793
Score = 33.9 bits (76), Expect = 0.20
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 240 PPSVLAVELEEDGRARPLVLHMSTLLRMIPTMAEDKERVSTGTKFALKLWLQHLGRTPPP 299
PP+V +E D P LHM L+R+ + ER ST + W Q R PP
Sbjct: 718 PPAVFEMEFSHDQEQDPRALHMERLMRLDSFL----ERPSTSKVRKSRSWCQSPQRPPPS 773
Query: 300 CKSAA 304
A+
Sbjct: 774 TTHAS 778
>gi|190684699 nudix (nucleoside diphosphate linked moiety X)-type
motif 22 isoform b [Homo sapiens]
Length = 270
Score = 32.3 bits (72), Expect = 0.59
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 93 LGVAVILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEEL 135
LGV L ++D ++ RR+R ++ +P L PGGH E + L
Sbjct: 121 LGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPEPQVNL 163
>gi|239755528 PREDICTED: hypothetical protein [Homo sapiens]
Length = 82
Score = 31.6 bits (70), Expect = 1.0
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 4 VRVQLLLSRRPESVSFARSVCGLLGAGPGLGTWPIHCSLKRGRLVLSSRPFP----GASA 59
VR ++ ++ RP A + L PG+G P HC++ R +L + P P G +
Sbjct: 2 VRGRVTVAGRPVEGDRATNPSPFLS--PGVGRDPGHCTILRA--LLRNCPCPARAVGPES 57
Query: 60 RLPLQRPPFCPFAALEERPRVPGAELPT 87
R PL R P P PR+P A P+
Sbjct: 58 RHPLSRRPSAP---QNSGPRMPVAREPS 82
>gi|239750006 PREDICTED: hypothetical protein XP_002347235 [Homo
sapiens]
Length = 82
Score = 31.6 bits (70), Expect = 1.0
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 4 VRVQLLLSRRPESVSFARSVCGLLGAGPGLGTWPIHCSLKRGRLVLSSRPFP----GASA 59
VR ++ ++ RP A + L PG+G P HC++ R +L + P P G +
Sbjct: 2 VRGRVTVAGRPVEGDRATNPSPFLS--PGVGRDPGHCTILRA--LLRNCPCPARAVGPES 57
Query: 60 RLPLQRPPFCPFAALEERPRVPGAELPT 87
R PL R P P PR+P A P+
Sbjct: 58 RHPLSRRPSAP---QNSGPRMPVAREPS 82
>gi|239744317 PREDICTED: hypothetical protein XP_002343096 [Homo
sapiens]
Length = 82
Score = 31.6 bits (70), Expect = 1.0
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 4 VRVQLLLSRRPESVSFARSVCGLLGAGPGLGTWPIHCSLKRGRLVLSSRPFP----GASA 59
VR ++ ++ RP A + L PG+G P HC++ R +L + P P G +
Sbjct: 2 VRGRVTVAGRPVEGDRATNPSPFLS--PGVGRDPGHCTILRA--LLRNCPCPARAVGPES 57
Query: 60 RLPLQRPPFCPFAALEERPRVPGAELPT 87
R PL R P P PR+P A P+
Sbjct: 58 RHPLSRRPSAP---QNSGPRMPVAREPS 82
>gi|22538453 phosphatidylinositol glycan anchor biosynthesis, class
Q isoform 1 [Homo sapiens]
Length = 760
Score = 31.6 bits (70), Expect = 1.0
Identities = 40/126 (31%), Positives = 46/126 (36%), Gaps = 33/126 (26%)
Query: 102 SDKTVLLTRRARTLSVSPNLWVPP--------------GGHVELEEELLDGGLRELWEES 147
+DK L R L P LW+PP G H+ LE E GLREL +
Sbjct: 510 ADKPTALQPRGAHLP-PPQLWLPPQALLGRPVPQAVPWGAHLPLEAERGQAGLRELL--A 566
Query: 148 GLHLPQG-----------QFSW-VPLGLWESAYPPRLSWGLPKYHHIVLYLLVISQESQQ 195
L P G Q SW + LW P G P YH L L VI E
Sbjct: 567 RLAPPHGHSQPSALPGWHQLSWRMSCALWTLLCAP--EHGRPCYH--TLGLEVIGSEQMW 622
Query: 196 QLQARI 201
AR+
Sbjct: 623 GWPARL 628
>gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]
Length = 147
Score = 31.2 bits (69), Expect = 1.3
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 121 LWVPPGGHVELEEELLDGGLRELWEESGL 149
+W PGG E EE++ D +RE++EE+G+
Sbjct: 1 MWKFPGGLSEPEEDIGDTAVREVFEETGI 29
>gi|183227703 mitochondrial translation optimization 1 homolog
isoform c [Homo sapiens]
Length = 732
Score = 31.2 bits (69), Expect = 1.3
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 64 QRPPFCPFAALEERPRVPGAELPTDRGVDLGVAVILQSS---DKTVLLTRRARTL---SV 117
Q+ P ++ PR P ++ G G ++ +T+LLT R T+ S
Sbjct: 18 QQFPLARLSSDSAAPRTPHFDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSC 77
Query: 118 SPNLWVPPGGHVELEEELLDGGLRELWEESGLH 150
+P+ GH+ E + LDG + ++SG+H
Sbjct: 78 NPSFGGIGKGHLMREVDALDGLCSRICDQSGVH 110
>gi|19882217 mitochondrial translation optimization 1 homolog
isoform b [Homo sapiens]
Length = 717
Score = 31.2 bits (69), Expect = 1.3
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 64 QRPPFCPFAALEERPRVPGAELPTDRGVDLGVAVILQSS---DKTVLLTRRARTL---SV 117
Q+ P ++ PR P ++ G G ++ +T+LLT R T+ S
Sbjct: 18 QQFPLARLSSDSAAPRTPHFDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSC 77
Query: 118 SPNLWVPPGGHVELEEELLDGGLRELWEESGLH 150
+P+ GH+ E + LDG + ++SG+H
Sbjct: 78 NPSFGGIGKGHLMREVDALDGLCSRICDQSGVH 110
>gi|74024895 mitochondrial translation optimization 1 homolog
isoform a [Homo sapiens]
Length = 692
Score = 31.2 bits (69), Expect = 1.3
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 64 QRPPFCPFAALEERPRVPGAELPTDRGVDLGVAVILQSS---DKTVLLTRRARTL---SV 117
Q+ P ++ PR P ++ G G ++ +T+LLT R T+ S
Sbjct: 18 QQFPLARLSSDSAAPRTPHFDVIVIGGGHAGTEAATAAARCGSRTLLLTHRVDTIGQMSC 77
Query: 118 SPNLWVPPGGHVELEEELLDGGLRELWEESGLH 150
+P+ GH+ E + LDG + ++SG+H
Sbjct: 78 NPSFGGIGKGHLMREVDALDGLCSRICDQSGVH 110
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 30.8 bits (68), Expect = 1.7
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Query: 222 VAAAEDGTETPGLLPQDLPPSVLAVELEEDGRARPLVLHMSTLLRMIPTMAEDKERVSTG 281
+ A G TPG PQ P V + L + R + +S L + +A D +
Sbjct: 306 IGGAGQGMSTPGSSPQHRPAGVSPLSLSTEARRQQASPTLSPLSPITQAVAMDALSLEQQ 365
Query: 282 TKFALKLWLQHLGRTPPPCKSAAYLDPGPAKEEWNMDPLPPNQ 324
+A + G PP + P PA ++ P PP Q
Sbjct: 366 LPYA---FFTQAGSQQPPPQPQPPPPPPPASQQ--PPPPPPPQ 403
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 30.8 bits (68), Expect = 1.7
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Query: 222 VAAAEDGTETPGLLPQDLPPSVLAVELEEDGRARPLVLHMSTLLRMIPTMAEDKERVSTG 281
+ A G TPG PQ P V + L + R + +S L + +A D +
Sbjct: 290 IGGAGQGMSTPGSSPQHRPAGVSPLSLSTEARRQQASPTLSPLSPITQAVAMDALSLEQQ 349
Query: 282 TKFALKLWLQHLGRTPPPCKSAAYLDPGPAKEEWNMDPLPPNQ 324
+A + G PP + P PA ++ P PP Q
Sbjct: 350 LPYA---FFTQAGSQQPPPQPQPPPPPPPASQQ--PPPPPPPQ 387
>gi|239755027 PREDICTED: hypothetical protein [Homo sapiens]
Length = 239
Score = 30.8 bits (68), Expect = 1.7
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 66 PPFCPFAALEER-PRVPGAELPTDRGVDLGVAVILQSSDKTVLLTRRARTLSVSPNLWVP 124
PP+ P L +R P +PG E G +LG +V + + VL TL + W
Sbjct: 52 PPWSPLRHLPQRDPLIPGLEGSRSHGFNLGDSVCVGAQGGDVLGKGTRWTLGRADGSWER 111
Query: 125 PG 126
PG
Sbjct: 112 PG 113
>gi|239749540 PREDICTED: hypothetical protein [Homo sapiens]
Length = 239
Score = 30.8 bits (68), Expect = 1.7
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 66 PPFCPFAALEER-PRVPGAELPTDRGVDLGVAVILQSSDKTVLLTRRARTLSVSPNLWVP 124
PP+ P L +R P +PG E G +LG +V + + VL TL + W
Sbjct: 52 PPWSPLRHLPQRDPLIPGLEGSRSHGFNLGDSVCVGAQGGDVLGKGTRWTLGRADGSWER 111
Query: 125 PG 126
PG
Sbjct: 112 PG 113
>gi|239743690 PREDICTED: hypothetical protein XP_002342947 [Homo
sapiens]
Length = 239
Score = 30.8 bits (68), Expect = 1.7
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 66 PPFCPFAALEER-PRVPGAELPTDRGVDLGVAVILQSSDKTVLLTRRARTLSVSPNLWVP 124
PP+ P L +R P +PG E G +LG +V + + VL TL + W
Sbjct: 52 PPWSPLRHLPQRDPLIPGLEGSRSHGFNLGDSVCVGAQGGDVLGKGTRWTLGRADGSWER 111
Query: 125 PG 126
PG
Sbjct: 112 PG 113
>gi|40288286 nudix-type motif 1 isoform p22 [Homo sapiens]
Length = 179
Score = 30.0 bits (66), Expect = 2.9
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 86 PTDRGVDLGVAVILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWE 145
P G ++L + VLL + R W GG V+ E + DG REL E
Sbjct: 21 PGTMGASRLYTLVLVLQPQRVLLGMKKRGFGAGR--WNGFGGKVQEGETIEDGARRELQE 78
Query: 146 ESGL 149
ESGL
Sbjct: 79 ESGL 82
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,453,327
Number of Sequences: 37866
Number of extensions: 883731
Number of successful extensions: 2485
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 2455
Number of HSP's gapped (non-prelim): 62
length of query: 328
length of database: 18,247,518
effective HSP length: 103
effective length of query: 225
effective length of database: 14,347,320
effective search space: 3228147000
effective search space used: 3228147000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.