Guide to the Human Genome
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Name: NUDT15 Sequence: fasta or formatted (164aa) NCBI GI: 8922792
Description:

nudix-type motif 15

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          7           2
 C cysteine            2.4          4           1
 D aspartate           3.0          5           1
 E glutamate          11.6         19           2
 F phenylalanine       3.7          6           1
 G glycine             9.8         16           2
 H histidine           4.9          8           1
 I isoleucine          1.2          2           1
 K lysine              6.7         11           1
 L leucine             9.1         15           2
 M methionine          1.2          2           1
 N asparagine          4.3          7           1
 P proline             6.1         10           2
 Q glutamine           3.0          5           1
 R arginine            4.3          7           2
 S serine              4.9          8           1
 T threonine           3.7          6           1
 V valine              9.8         16           3
 W tryptophan          3.7          6           1
 Y tyrosine            2.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nudix-type motif 15 
NUDT1                 0.061   nudix-type motif 1 isoform p22 
NUDT1                 0.061   nudix-type motif 1 isoform p18 
NUDT1                 0.061   nudix-type motif 1 isoform p22 
NUDT1                 0.061   nudix-type motif 1 isoform p18 
NUDT1                 0.061   nudix-type motif 1 isoform p22 
NUDT1                 0.061   nudix-type motif 1 isoform p18 
NUDT1                 0.061   nudix-type motif 1 isoform p18 
NUDT17                0.058   nudix (nucleoside diphosphate linked moiety X)-type ...
NUDT18                0.036   nudix (nucleoside diphosphate linked moiety X)-type...
NUDT5                 0.030   nudix-type motif 5 
GBP6                  0.024   guanylate binding protein family, member 6 
NUDT12                0.021   nudix-type motif 12 
REG1B                 0.021   regenerating islet-derived 1 beta precursor 
REG1A                 0.021   regenerating islet-derived 1 alpha precursor 
NUDT2                 0.018   nudix-type motif 2 
NUDT2                 0.018   nudix-type motif 2 
NUDT2                 0.018   nudix-type motif 2 
NUDT13                0.015   nudix-type motif 13 
ATP2B3                0.015   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.015   plasma membrane calcium ATPase 3 isoform 3a 
HIVEP3                0.012   human immunodeficiency virus type I enhancer bindin...
HIVEP3                0.012   human immunodeficiency virus type I enhancer bindin...
APEH                  0.009   N-acylaminoacyl-peptide hydrolase 
RGPD4                 0.006   RANBP2-like and GRIP domain containing 4 
ZNF746                0.006   zinc finger protein 746 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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