Guide to the Human Genome
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Name: NUDT18 Sequence: fasta or formatted (323aa) NCBI GI: 118026927
Description:

nudix (nucleoside diphosphate linked moiety X)-type motif 18

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         27           2
 C cysteine            2.8          9           1
 D aspartate           3.1         10           1
 E glutamate           8.4         27           2
 F phenylalanine       1.9          6           1
 G glycine             7.4         24           2
 H histidine           3.1         10           2
 I isoleucine          2.5          8           1
 K lysine              2.8          9           1
 L leucine            13.9         45           2
 M methionine          2.2          7           1
 N asparagine          1.2          4           1
 P proline             6.8         22           2
 Q glutamine           5.9         19           2
 R arginine            6.5         21           1
 S serine              6.2         20           2
 T threonine           4.0         13           1
 V valine              9.9         32           2
 W tryptophan          1.9          6           2
 Y tyrosine            1.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nudix (nucleoside diphosphate linked moiety X)-type... 
NUDT10                0.027   nudix-type motif 10 
NUDT6                 0.026   nudix-type motif 6 isoform a 
NUDT11                0.024   nudix-type motif 11 
NUDT4                 0.022   nudix-type motif 4 isoform alpha 
NUDT4                 0.022   nudix-type motif 4 isoform beta 
NUDT12                0.019   nudix-type motif 12 
NUDT15                0.019   nudix-type motif 15 
NUDT3                 0.019   nudix-type motif 3 
NUDT9                 0.018   nudix-type motif 9 isoform b 
NUDT9                 0.018   nudix-type motif 9 isoform a 
NUDT17                0.018   nudix (nucleoside diphosphate linked moiety X)-type ...
NUDT2                 0.016   nudix-type motif 2 
NUDT2                 0.016   nudix-type motif 2 
NUDT2                 0.016   nudix-type motif 2 
NUDT6                 0.014   nudix-type motif 6 isoform b 
NUDT1                 0.014   nudix-type motif 1 isoform p22 
NUDT1                 0.014   nudix-type motif 1 isoform p18 
NUDT1                 0.014   nudix-type motif 1 isoform p22 
NUDT1                 0.014   nudix-type motif 1 isoform p18 
NUDT1                 0.014   nudix-type motif 1 isoform p22 
NUDT1                 0.014   nudix-type motif 1 isoform p18 
NUDT1                 0.014   nudix-type motif 1 isoform p18 
TRPM2                 0.013   transient receptor potential cation channel, subfamil...
NOMO2                 0.011   nodal modulator 2 isoform 2 
NOMO2                 0.011   nodal modulator 2 isoform 1 
NOMO3                 0.011   nodal modulator 3 
NOMO1                 0.011   nodal modulator 1 
LOC730198             0.010   PREDICTED: hypothetical protein 
LOC730198             0.010   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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