Guide to the Human Genome
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Name: MTO1 Sequence: fasta or formatted (732aa) NCBI GI: 183227703
Description:

mitochondrial translation optimization 1 homolog isoform c

Referenced in:

tRNA Enzymes

Other entries for this name:
alt prot [717aa] mitochondrial translation optimization 1 homolog isoform b
alt prot [692aa] mitochondrial translation optimization 1 homolog isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         46           3
 C cysteine            2.2         16           2
 D aspartate           4.5         33           2
 E glutamate           6.7         49           2
 F phenylalanine       2.9         21           2
 G glycine             7.0         51           3
 H histidine           2.5         18           2
 I isoleucine          5.9         43           2
 K lysine              5.1         37           2
 L leucine            10.9         80           3
 M methionine          1.9         14           1
 N asparagine          2.5         18           1
 P proline             5.6         41           2
 Q glutamine           4.9         36           2
 R arginine            7.0         51           2
 S serine              7.4         54           2
 T threonine           6.7         49           2
 V valine              6.7         49           2
 W tryptophan          0.8          6           1
 Y tyrosine            2.7         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial translation optimization 1 homolog is... 
MTO1                  0.930   mitochondrial translation optimization 1 homolog iso...
MTO1                  0.921   mitochondrial translation optimization 1 homolog iso...
TXNRD1                0.007   thioredoxin reductase 1 isoform 3 
TXNRD1                0.007   thioredoxin reductase 1 isoform 1 
TACC3                 0.007   transforming, acidic coiled-coil containing protein 3...
TXNRD1                0.006   thioredoxin reductase 1 isoform 2 
TXNRD1                0.006   thioredoxin reductase 1 isoform 2 
TXNRD1                0.006   thioredoxin reductase 1 isoform 2 
PYROXD2               0.006   pyridine nucleotide-disulphide oxidoreductase domai...
C20orf96              0.006   hypothetical protein LOC140680 
SMC1A                 0.005   structural maintenance of chromosomes 1A 
RETSAT                0.005   all-trans-13,14-dihydroretinol saturase 
FOXRED1               0.005   FAD-dependent oxidoreductase domain containing 1 [Hom...
DPYD                  0.005   dihydropyrimidine dehydrogenase isoform 1 
GPD2                  0.004   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
GPD2                  0.004   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
NUDT17                0.004   nudix (nucleoside diphosphate linked moiety X)-type ...
KALRN                 0.004   kalirin, RhoGEF kinase isoform 1 
KALRN                 0.004   kalirin, RhoGEF kinase isoform 3 
LRP5                  0.004   low density lipoprotein receptor-related protein 5 ...
SDHA                  0.004   succinate dehydrogenase complex, subunit A, flavopr...
HGFAC                 0.004   HGF activator preproprotein 
MAOA                  0.003   monoamine oxidase A 
KCNH2                 0.003   voltage-gated potassium channel, subfamily H, member...
KCNH2                 0.003   voltage-gated potassium channel, subfamily H, member ...
GSR                   0.003   glutathione reductase 
DNAH10                0.003   dynein, axonemal, heavy chain 10 
CCDC45                0.003   coiled-coil domain containing 45 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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